Study Desmedt-ER-neg

Study informations

165 subnetworks in total page | file

2310 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 6902

score

Expression data for subnetwork 6902 in each dataset

IPC | Loi | Schmidt | VanDeVijver | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 6902 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	IPC	Loi	Schmidt	VanDeVijver	Wang
EP300		113	4	1	4	-0.149	0.087	0.102	0.052	0.025
MAPK8		8	222	696	677	0.153	0.200	0.249	-0.066	0.138
TEK		18	86	83	95	-0.149	-0.049	0.174	0.015	0.113
SORBS1		57	19	1	13	-0.043	0.015	0.314	-0.072	0.200
HBEGF		1	1195	1102	1139	0.087	0.002	0.039	0.036	0.076
PCDH17		1	1195	1102	1139	0.109	-0.064	undef	0.135	undef
EGF		12	140	638	620	-0.212	0.182	-0.276	-0.060	0.005
ERBB2		141	1	1	1	-0.103	0.092	-0.090	0.267	0.046
CDKN1A		110	5	1	5	0.064	0.254	0.030	undef	0.082
PRKCA		63	15	1	10	-0.016	-0.088	0.174	0.095	0.005
GRM5		15	111	179	191	0.094	-0.019	0.000	0.093	-0.093
NELL2		7	256	727	714	-0.005	0.138	0.421	-0.027	0.074
SHC1		4	440	478	479	-0.090	-0.041	-0.005	0.169	-0.138
PLAU		12	140	179	192	0.187	0.153	0.141	0.072	0.192
PIN1		24	62	179	181	0.194	0.040	-0.040	0.065	-0.048
PTPRK		14	117	83	96	0.156	0.141	-0.094	0.048	-0.024
PLK1		11	148	236	232	0.142	-0.143	0.094	-0.192	-0.163
PTBP2		2	743	1102	1102	0.073	0.057	0.131	-0.114	0.117
EYA3		9	196	318	324	-0.034	0.053	-0.020	0.188	-0.142
KALRN		4	440	1102	1080	0.090	0.136	-0.057	0.202	-0.053
VEGFA		68	14	83	78	0.090	0.200	0.030	0.095	0.148
ADM		10	167	682	653	0.255	0.187	0.091	0.169	0.212
CDC45		5	360	318	334	0.134	-0.171	0.185	-0.103	-0.085
IRS2		3	557	1102	1098	-0.006	0.043	0.054	-0.256	0.125
RBL1		21	73	1	27	0.078	undef	undef	0.051	undef
CEP55		2	743	928	929	0.097	-0.196	0.056	-0.002	0.052
PAM		10	167	638	621	-0.035	0.307	0.200	0.002	0.104
LPL		13	124	236	230	-0.102	-0.062	0.292	0.087	-0.105
SERPINE1		8	222	179	200	0.160	0.200	0.056	0.070	0.030
KLF5		76	9	1	7	0.077	0.117	-0.007	-0.110	-0.006
TGS1		5	360	780	767	-0.060	-0.044	0.232	undef	0.269
GAB1		5	360	1102	1076	-0.069	0.084	-0.117	0.116	-0.212
EYA2		13	124	318	316	-0.034	0.113	-0.142	undef	-0.019
FN1		6	301	590	582	0.190	0.133	0.091	undef	0.083
RASSF9		4	440	1102	1080	0.156	-0.058	0.173	0.122	-0.133
EYA1		8	222	1010	981	0.135	-0.065	0.162	0.068	-0.088
DYM		2	743	1102	1102	-0.053	-0.105	-0.076	0.033	0.109
SDC2		4	440	590	585	-0.027	0.068	0.033	undef	0.215
MAPK8IP3		3	557	928	925	0.010	0.045	-0.046	undef	0.059
LRP2		3	557	1102	1098	0.193	-0.042	0.001	-0.138	0.125
FLOT1		2	743	1102	1102	0.076	0.004	-0.095	0.188	-0.095
CD7		2	743	1102	1102	0.020	-0.151	-0.165	0.027	-0.073
HOXB2		33	37	318	289	0.024	-0.143	0.076	0.247	-0.184
EFEMP1		1	1195	1102	1139	-0.148	0.011	0.146	-0.201	0.067
SPP1		26	52	83	91	0.130	0.119	0.184	0.204	0.153
SUV39H2		8	222	318	325	0.150	-0.097	-0.057	undef	0.028
GHR		35	34	83	83	-0.112	0.174	0.090	0.176	0.201
PTPN11		20	81	83	94	-0.152	0.014	0.066	0.304	0.089
CD9		13	124	525	503	0.036	-0.115	-0.109	0.281	-0.147
GMPS		7	256	318	328	0.083	-0.022	0.044	-0.019	0.151
BNIP3		11	148	236	232	0.193	0.071	0.102	0.119	0.285
BCL2		37	32	83	82	-0.077	-0.035	0.128	-0.106	0.043
RNF5		2	743	1102	1102	0.067	0.024	0.050	0.035	0.252
MYB		28	47	366	344	-0.028	0.075	0.002	0.065	-0.012
SP1		72	10	83	77	0.222	-0.254	0.239	0.020	0.082
PXN		12	140	1	36	-0.088	0.284	-0.022	0.060	0.114
PIK3R1		127	2	1	2	-0.237	0.381	0.065	undef	-0.002
OXR1		1	1195	1102	1139	-0.029	-0.183	undef	undef	undef
EDN1		6	301	682	669	0.100	0.126	0.249	-0.086	0.121
ITGA5		26	52	179	177	0.031	0.192	0.125	0.133	0.202
EGFR		117	3	1	3	-0.195	0.240	-0.205	-0.187	0.065
XK		18	86	179	187	0.154	-0.000	0.067	-0.123	-0.040
INSR		96	6	236	221	0.063	0.173	0.135	-0.014	-0.072
GRB7		58	18	1	12	0.021	0.115	-0.072	0.229	0.129
IGFBP5		48	23	83	80	-0.076	0.110	0.074	0.278	0.181
PML		6	301	478	473	-0.068	-0.010	-0.007	-0.153	-0.070
ATN1		7	256	412	414	-0.005	-0.093	0.005	-0.185	-0.136
TIE1		18	86	366	357	-0.108	0.005	0.141	-0.108	0.252
CDKN2A		60	17	1	11	0.263	-0.113	0.111	undef	-0.105

GO Enrichment output for subnetwork 6902 in each dataset

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
cellular response to hormone stimulus	GO:0032870		8.591E-13	2.099E-09
epidermal growth factor receptor signaling pathway	GO:0007173		1.315E-12	1.606E-09
positive regulation of MAP kinase activity	GO:0043406		2.368E-12	1.928E-09
insulin receptor signaling pathway	GO:0008286		7.508E-11	4.585E-08
organ growth	GO:0035265		7.534E-11	3.681E-08
positive regulation of cell migration	GO:0030335		7.1E-10	2.891E-07
cellular response to insulin stimulus	GO:0032869		1.017E-09	3.548E-07
response to peptide hormone stimulus	GO:0043434		1.596E-09	4.875E-07
positive regulation of cell motion	GO:0051272		1.812E-09	4.92E-07
activation of MAPK activity	GO:0000187		2.321E-09	5.671E-07
response to insulin stimulus	GO:0032868		4.87E-09	1.082E-06

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of MAP kinase activity	GO:0043406		4.214E-12	1.014E-08
cellular response to hormone stimulus	GO:0032870		2.994E-11	3.602E-08
organ growth	GO:0035265		9.967E-11	7.994E-08
epidermal growth factor receptor signaling pathway	GO:0007173		1.101E-10	6.625E-08
positive regulation of cell migration	GO:0030335		9.442E-10	4.544E-07
positive regulation of cell motion	GO:0051272		2.448E-09	9.816E-07
activation of MAPK activity	GO:0000187		3.557E-09	1.223E-06
insulin receptor signaling pathway	GO:0008286		5.381E-09	1.618E-06
response to hypoxia	GO:0001666		1.643E-08	4.393E-06
response to oxygen levels	GO:0070482		1.996E-08	4.803E-06
negative regulation of transport	GO:0051051		2.196E-08	4.804E-06

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of MAP kinase activity	GO:0043406		1.996E-11	4.59E-08
cellular response to hormone stimulus	GO:0032870		1.093E-10	1.257E-07
organ growth	GO:0035265		3.437E-10	2.635E-07
epidermal growth factor receptor signaling pathway	GO:0007173		4.478E-10	2.575E-07
positive regulation of cell migration	GO:0030335		2.516E-09	1.157E-06
positive regulation of cell motion	GO:0051272		5.45E-09	2.089E-06
activation of MAPK activity	GO:0000187		8.358E-09	2.746E-06
negative regulation of peptide secretion	GO:0002792		1.199E-08	3.447E-06
insulin receptor signaling pathway	GO:0008286		1.367E-08	3.493E-06
regulation of protein export from nucleus	GO:0046825		3.577E-08	8.228E-06
response to hypoxia	GO:0001666		4.178E-08	8.735E-06

VanDeVijver file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of cell migration	GO:0030334		2.722E-11	5.017E-08
regulation of locomotion	GO:0040012		8.164E-11	7.523E-08
regulation of cell motion	GO:0051270		8.164E-11	5.016E-08
positive regulation of MAP kinase activity	GO:0043406		9.292E-10	4.281E-07
response to hypoxia	GO:0001666		1.79E-09	6.596E-07
response to oxygen levels	GO:0070482		2.09E-09	6.42E-07
positive regulation of cell migration	GO:0030335		3.137E-09	8.258E-07
regulation of anatomical structure morphogenesis	GO:0022603		4.502E-09	1.037E-06
positive regulation of cell motion	GO:0051272		5.691E-09	1.165E-06
regulation of MAP kinase activity	GO:0043405		1.086E-08	2.001E-06
negative regulation of multicellular organismal process	GO:0051241		6.069E-08	1.017E-05

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of MAP kinase activity	GO:0043406		1.996E-11	4.59E-08
cellular response to hormone stimulus	GO:0032870		1.093E-10	1.257E-07
organ growth	GO:0035265		3.437E-10	2.635E-07
epidermal growth factor receptor signaling pathway	GO:0007173		4.478E-10	2.575E-07
positive regulation of cell migration	GO:0030335		2.516E-09	1.157E-06
positive regulation of cell motion	GO:0051272		5.45E-09	2.089E-06
activation of MAPK activity	GO:0000187		8.358E-09	2.746E-06
negative regulation of peptide secretion	GO:0002792		1.199E-08	3.447E-06
insulin receptor signaling pathway	GO:0008286		1.367E-08	3.493E-06
regulation of protein export from nucleus	GO:0046825		3.577E-08	8.228E-06
response to hypoxia	GO:0001666		4.178E-08	8.735E-06