Interactome-Transcriptome Integration

Garcia M. et al. companion website

Supervised Analysis on Breast Cancer Metastatic Relapse (April 2011)

Reference: Garcia M, Millat-Carus R, Bertucci F, Finetti P, Birnbaum D, Bidaut G. Interactome-transcriptome integration for predicting distant metastasis in breast cancer. Bioinformatics. 2012 Mar 1;28(5):672-8. doi: 10.1093/bioinformatics/bts025. PMID: 22238264

(ITI v 2.0)

Exploration of five supervised analysis with classification.

Desmedt Analysis - ER+ 6 subnetworks

Desmedt Analysis - ER- 165 subnetworks

van De Vijver Analysis - ER+ 14 subnetworks

van De Vijver Analysis - ER- 122 subnetworks

Other information

Download source code and scripts here

Questions? Comments? Do not hesitate to contact us from the Cibi home page.