Study Desmedt-ER-neg

Study informations

165 subnetworks in total page | file

2310 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 6581

score

DatasetScoreP-val 1P-val 2P-val 3Fisher Score
IPC0.75413.498e-035.680e-047.700e-011.530e-06
Loi0.23057.991e-021.127e-024.274e-013.847e-04
Schmidt0.67350.000e+000.000e+004.484e-020.000e+00
VanDeVijver0.79070.000e+000.000e+003.475e-030.000e+00
Wang0.26192.631e-034.338e-023.943e-014.501e-05

Expression data for subnetwork 6581 in each dataset

IPC | Loi | Schmidt | VanDeVijver | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 6581 in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank IPCLoiSchmidtVanDeVijverWang
TEKTEK on ITI TEK on NCBI18868395-0.149-0.0490.1740.0150.113
EP300EP300 on ITI EP300 on NCBI113414-0.1490.0870.1020.0520.025
SORBS1SORBS1 on ITI SORBS1 on NCBI5719113-0.0430.0150.314-0.0720.200
SIX6SIX6 on ITI SIX6 on NCBI2743727734undef-0.0320.0000.1060.153
POLR1APOLR1A on ITI POLR1A on NCBI6301457452-0.193-0.066undef0.093undef
TP53TP53 on ITI TP53 on NCBI85716-0.1670.148-0.0270.2520.147
CIB2CIB2 on ITI CIB2 on NCBI18865905640.228-0.1490.1060.1270.190
TNXBTNXB on ITI TNXB on NCBI4440727723-0.169-0.0760.1600.1820.173
ERBB2ERBB2 on ITI ERBB2 on NCBI141111-0.1030.092-0.0900.2670.046
ID4ID4 on ITI ID4 on NCBI3534236223-0.1790.1370.241undef0.036
EBNA1BP2EBNA1BP2 on ITI EBNA1BP2 on NCBI111957277710.186-0.041-0.003-0.061-0.058
CDKN1ACDKN1A on ITI CDKN1A on NCBI1105150.0640.2540.030undef0.082
TM4SF19TM4SF19 on ITI TM4SF19 on NCBI111957277710.163-0.182undefundefundef
BARD1BARD1 on ITI BARD1 on NCBI69121411320.179-0.1650.0860.245-0.104
CDKN2CCDKN2C on ITI CDKN2C on NCBI161042362270.216-0.1060.202-0.024-0.081
NELL2NELL2 on ITI NELL2 on NCBI7256727714-0.0050.1380.421-0.0270.074
CTGFCTGF on ITI CTGF on NCBI3240318290-0.1690.1810.1260.1010.209
CDH1CDH1 on ITI CDH1 on NCBI3732296278-0.2270.187-0.2360.137-0.024
PIN1PIN1 on ITI PIN1 on NCBI24621791810.1940.040-0.0400.065-0.048
CRCT1CRCT1 on ITI CRCT1 on NCBI27437277340.1350.0500.000-0.1030.154
MRE11AMRE11A on ITI MRE11A on NCBI11195727771-0.098-0.0930.105-0.0060.065
TWIST1TWIST1 on ITI TWIST1 on NCBI50201140.0440.1940.061undef0.219
PPP2R2BPPP2R2B on ITI PPP2R2B on NCBI39291791730.124-0.0190.0290.116-0.073
BAT2L1BAT2L1 on ITI BAT2L1 on NCBI11195727771-0.1110.2400.0930.1890.086
NR2C1NR2C1 on ITI NR2C1 on NCBI82227277030.1210.0390.119-0.197-0.026
PDGFRBPDGFRB on ITI PDGFRB on NCBI12140141142-0.0940.2240.1270.1530.189
PTPRKPTPRK on ITI PTPRK on NCBI1411783960.1560.141-0.0940.048-0.024
TUBA4ATUBA4A on ITI TUBA4A on NCBI72561470.1570.136-0.010undef0.156
POLR2LPOLR2L on ITI POLR2L on NCBI53607277220.037-0.0120.2240.0540.015
ITCHITCH on ITI ITCH on NCBI11195727771-0.097-0.150-0.1700.006-0.120
VEGFAVEGFA on ITI VEGFA on NCBI681483780.0900.2000.0300.0950.148
CDK1CDK1 on ITI CDK1 on NCBI631583790.265-0.1950.1060.0880.031
HHEXHHEX on ITI HHEX on NCBI4440727723-0.130-0.1780.177-0.1800.005
BRCA2BRCA2 on ITI BRCA2 on NCBI41282362220.206-0.124-0.0660.233-0.116
CCNT1CCNT1 on ITI CCNT1 on NCBI63014784730.008-0.0280.1620.007-0.213
CCNA1CCNA1 on ITI CCNA1 on NCBI33374123930.1740.0920.0780.055-0.098
TLE1TLE1 on ITI TLE1 on NCBI44407277230.1830.0500.0300.0800.055
SKP1SKP1 on ITI SKP1 on NCBI27437277340.1430.0370.0550.148-0.110
GSK3BGSK3B on ITI GSK3B on NCBI798179169-0.1300.292-0.1290.2910.057
KLF5KLF5 on ITI KLF5 on NCBI769170.0770.117-0.007-0.110-0.006
GRB10GRB10 on ITI GRB10 on NCBI3557727728-0.1490.182-0.070-0.0000.081
TGFB1I1TGFB1I1 on ITI TGFB1I1 on NCBI4922116-0.1050.2290.1430.1950.298
PCSK5PCSK5 on ITI PCSK5 on NCBI27437277340.0210.0740.121undef0.092
ENO2ENO2 on ITI ENO2 on NCBI35577277280.0850.1140.148-0.0710.208
DCTN2DCTN2 on ITI DCTN2 on NCBI82223663730.0140.1500.0610.1130.303
DLGAP4DLGAP4 on ITI DLGAP4 on NCBI7256727714-0.0290.180-0.2010.135-0.043
CHIC2CHIC2 on ITI CHIC2 on NCBI27437277340.128-0.1540.1200.154-0.008
IKBKAPIKBKAP on ITI IKBKAP on NCBI101674124080.0890.1840.1420.105-0.017
FOXG1FOXG1 on ITI FOXG1 on NCBI63017277160.136-0.156-0.126-0.013-0.068
HOXB2HOXB2 on ITI HOXB2 on NCBI33373182890.024-0.1430.0760.247-0.184
GMNNGMNN on ITI GMNN on NCBI27431660.201-0.0710.1040.0660.158
UBXN7UBXN7 on ITI UBXN7 on NCBI3557727728-0.0550.1530.2240.1670.175
ABL1ABL1 on ITI ABL1 on NCBI13124727699-0.1520.2000.108undef-0.059
RB1RB1 on ITI RB1 on NCBI31431220.013-0.0510.0570.100-0.082
APLP1APLP1 on ITI APLP1 on NCBI82227277030.2840.043-0.105-0.121-0.190
SIX1SIX1 on ITI SIX1 on NCBI27437277340.133-0.1340.005-0.0840.068
GLI3GLI3 on ITI GLI3 on NCBI2173478456-0.1380.080-0.0070.282-0.018
MAP1AMAP1A on ITI MAP1A on NCBI12140136-0.0450.143-0.0540.1620.147
TCF4TCF4 on ITI TCF4 on NCBI2743727734-0.1090.2290.0630.0250.097
PTENPTEN on ITI PTEN on NCBI27501411350.0450.0550.0170.183-0.041
CDC7CDC7 on ITI CDC7 on NCBI11195727771-0.005-0.1680.025undef0.126
SERBP1SERBP1 on ITI SERBP1 on NCBI27437277340.1110.0220.041-0.0930.019
SP1SP1 on ITI SP1 on NCBI721083770.222-0.2540.2390.0200.082
MYBMYB on ITI MYB on NCBI2847366344-0.0280.0750.0020.065-0.012
MDFIMDFI on ITI MDFI on NCBI1795236226-0.075-0.0010.1770.169-0.112
CHGBCHGB on ITI CHGB on NCBI7256682664-0.126-0.0410.0180.102-0.131
TK1TK1 on ITI TK1 on NCBI4440727723-0.089-0.1560.0290.119-0.052
DYNLT1DYNLT1 on ITI DYNLT1 on NCBI27437277340.275-0.041-0.176-0.004-0.168
PIK3R1PIK3R1 on ITI PIK3R1 on NCBI127212-0.2370.3810.065undef-0.002
SKP2SKP2 on ITI SKP2 on NCBI29451230.092-0.0430.237undef-0.009
PTPN12PTPN12 on ITI PTPN12 on NCBI6301478473-0.1590.1530.0310.0830.042
ITGA5ITGA5 on ITI ITGA5 on NCBI26521791770.0310.1920.1250.1330.202
FOSFOS on ITI FOS on NCBI4227117-0.1370.1290.185-0.1440.234
NPDC1NPDC1 on ITI NPDC1 on NCBI3557727728-0.0190.2210.0440.006-0.146
HOXA1HOXA1 on ITI HOXA1 on NCBI111957277710.055-0.0470.147undef0.042
POLR3APOLR3A on ITI POLR3A on NCBI8222296287-0.010-0.032undef0.091undef
EGFREGFR on ITI EGFR on NCBI117313-0.1950.240-0.205-0.1870.065
MAP1BMAP1B on ITI MAP1B on NCBI691219-0.1230.263-0.1070.3040.100
TPRTPR on ITI TPR on NCBI11148727701-0.1300.120-0.036-0.0850.156
PDCD6PDCD6 on ITI PDCD6 on NCBI101671400.091-0.060undefundefundef
NEK1NEK1 on ITI NEK1 on NCBI151111411390.0320.1840.049undef0.135
POLE2POLE2 on ITI POLE2 on NCBI44407277230.200-0.2030.0490.000-0.010
HIF1AHIF1A on ITI HIF1A on NCBI13124236230-0.0980.224-0.1180.1350.356
RAD51RAD51 on ITI RAD51 on NCBI131247276990.146-0.0980.135-0.0700.061
ATN1ATN1 on ITI ATN1 on NCBI7256412414-0.005-0.0930.005-0.185-0.136
TIE1TIE1 on ITI TIE1 on NCBI1886366357-0.1080.0050.141-0.1080.252
UBE2CUBE2C on ITI UBE2C on NCBI111957277710.210-0.2110.045undef0.086
CDH2CDH2 on ITI CDH2 on NCBI101677277020.1690.109-0.0160.1230.155
SIX2SIX2 on ITI SIX2 on NCBI2743727734-0.001-0.092-0.1960.1610.137
CDKN2ACDKN2A on ITI CDKN2A on NCBI60171110.263-0.1130.111undef-0.105

GO Enrichment output for subnetwork 6581 in each dataset

IPC file

NameAccession NumberLinkP-valCorrected P-val
elastic fiber assemblyGO:0048251GO:0048251 on GO6.741E-171.647E-13
collagen metabolic processGO:0032963GO:0032963 on GO2.184E-132.667E-10
multicellular organismal macromolecule metabolic processGO:0044259GO:0044259 on GO5.411E-134.407E-10
multicellular organismal metabolic processGO:0044236GO:0044236 on GO2.603E-121.59E-09
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO7.974E-123.896E-09
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO6.15E-112.504E-08
agingGO:0007568GO:0007568 on GO7.241E-112.527E-08
extracellular matrix organizationGO:0030198GO:0030198 on GO3.181E-109.715E-08
positive regulation of smooth muscle cell proliferationGO:0048661GO:0048661 on GO3.625E-109.839E-08
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO4.475E-101.093E-07
platelet-derived growth factor receptor signaling pathwayGO:0048008GO:0048008 on GO5.199E-101.155E-07


Loi file

NameAccession NumberLinkP-valCorrected P-val
elastic fiber assemblyGO:0048251GO:0048251 on GO1.524E-143.668E-11
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.488E-111.79E-08
collagen metabolic processGO:0032963GO:0032963 on GO1.857E-111.489E-08
multicellular organismal macromolecule metabolic processGO:0044259GO:0044259 on GO4.203E-112.528E-08
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.143E-105.5E-08
multicellular organismal metabolic processGO:0044236GO:0044236 on GO1.722E-106.906E-08
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO6.44E-102.214E-07
platelet-derived growth factor receptor signaling pathwayGO:0048008GO:0048008 on GO7.955E-102.393E-07
interphaseGO:0051325GO:0051325 on GO8.777E-102.346E-07
negative regulation of cell-matrix adhesionGO:0001953GO:0001953 on GO4.839E-091.164E-06
phospholipid dephosphorylationGO:0046839GO:0046839 on GO8.478E-091.854E-06


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
elastic fiber assemblyGO:0048251GO:0048251 on GO1.461E-133.359E-10
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.311E-101.507E-07
collagen metabolic processGO:0032963GO:0032963 on GO1.75E-101.342E-07
multicellular organismal macromolecule metabolic processGO:0044259GO:0044259 on GO4.059E-102.334E-07
multicellular organismal metabolic processGO:0044236GO:0044236 on GO1.718E-097.905E-07
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO5.046E-091.934E-06
interphaseGO:0051325GO:0051325 on GO6.335E-092.081E-06
platelet-derived growth factor receptor signaling pathwayGO:0048008GO:0048008 on GO1.332E-083.829E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.624E-084.149E-06
extracellular structure organizationGO:0043062GO:0043062 on GO2.01E-084.622E-06
extracellular matrix organizationGO:0030198GO:0030198 on GO6.96E-081.455E-05


VanDeVijver file

NameAccession NumberLinkP-valCorrected P-val
regulation of intracellular protein transportGO:0033157GO:0033157 on GO8.65E-081.594E-04
regulation of nucleocytoplasmic transportGO:0046822GO:0046822 on GO1.425E-071.313E-04
regulation of cell migrationGO:0030334GO:0030334 on GO2.716E-071.668E-04
skeletal system morphogenesisGO:0048705GO:0048705 on GO2.795E-071.288E-04
regulation of intracellular transportGO:0032386GO:0032386 on GO3.441E-071.268E-04
embryonic skeletal system morphogenesisGO:0048704GO:0048704 on GO3.651E-071.121E-04
regulation of angiogenesisGO:0045765GO:0045765 on GO6.147E-071.618E-04
regulation of locomotionGO:0040012GO:0040012 on GO6.275E-071.446E-04
regulation of cell motionGO:0051270GO:0051270 on GO6.275E-071.285E-04
platelet-derived growth factor receptor signaling pathwayGO:0048008GO:0048008 on GO8.826E-071.627E-04
embryonic skeletal system developmentGO:0048706GO:0048706 on GO1.498E-062.51E-04


Wang file

NameAccession NumberLinkP-valCorrected P-val
elastic fiber assemblyGO:0048251GO:0048251 on GO1.461E-133.359E-10
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.311E-101.507E-07
collagen metabolic processGO:0032963GO:0032963 on GO1.75E-101.342E-07
multicellular organismal macromolecule metabolic processGO:0044259GO:0044259 on GO4.059E-102.334E-07
multicellular organismal metabolic processGO:0044236GO:0044236 on GO1.718E-097.905E-07
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO5.046E-091.934E-06
interphaseGO:0051325GO:0051325 on GO6.335E-092.081E-06
platelet-derived growth factor receptor signaling pathwayGO:0048008GO:0048008 on GO1.332E-083.829E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.624E-084.149E-06
extracellular structure organizationGO:0043062GO:0043062 on GO2.01E-084.622E-06
extracellular matrix organizationGO:0030198GO:0030198 on GO6.96E-081.455E-05


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