Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 941

score

DatasetScoreP-val 1P-val 2P-val 3Fisher Score
Desmedt0.33951.139e-031.700e-051.437e-012.783e-09
IPC0.35683.225e-011.560e-019.301e-014.680e-02
Loi0.45001.810e-040.000e+006.800e-020.000e+00
Schmidt0.58232.000e-060.000e+001.533e-010.000e+00
Wang0.25279.172e-037.430e-022.500e-011.703e-04

Expression data for subnetwork 941 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 941 in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPCLoiSchmidtWang
EP300EP300 on ITI EP300 on NCBI713120.016-0.1490.0870.1020.025
TSFMTSFM on ITI TSFM on NCBI1652135613570.2030.155-0.0020.0650.076
MYH9MYH9 on ITI MYH9 on NCBI2391131913200.047-0.1030.2270.0070.165
CDKN1ACDKN1A on ITI CDKN1A on NCBI564130.0750.0640.2540.0300.082
NUFIP2NUFIP2 on ITI NUFIP2 on NCBI165213561357undef-0.097-0.167undefundef
MYH10MYH10 on ITI MYH10 on NCBI2391123612210.163-0.0290.1390.1320.223
RAD23ARAD23A on ITI RAD23A on NCBI165213561357-0.044-0.0130.056-0.1660.031
CDK14CDK14 on ITI CDK14 on NCBI2391135613370.067-0.1510.011-0.0710.107
RPL23ARPL23A on ITI RPL23A on NCBI106757520.0310.208-0.0070.0240.055
CALM2CALM2 on ITI CALM2 on NCBI165213561357-0.1140.0760.0560.1040.086
STRNSTRN on ITI STRN on NCBI165213561357-0.174-0.0440.147-0.054-0.118
MDM2MDM2 on ITI MDM2 on NCBI165213561357-0.137-0.110-0.0380.113-0.108
CDC42CDC42 on ITI CDC42 on NCBI449160.0360.0470.242-0.027-0.042
NVLNVL on ITI NVL on NCBI1652135613570.0750.0870.123-0.0770.138
GOT2GOT2 on ITI GOT2 on NCBI2391105210440.210-0.0610.100-0.2380.105
DCDDCD on ITI DCD on NCBI23915780undef0.135undefundefundef
PIN1PIN1 on ITI PIN1 on NCBI17301130.1350.1940.040-0.040-0.048
S100PS100P on ITI S100P on NCBI1652135613570.0530.2610.192-0.1540.018
ETFAETFA on ITI ETFA on NCBI32657567480.1050.0270.0940.0880.013
HIRIP3HIRIP3 on ITI HIRIP3 on NCBI165213561357-0.1930.167-0.099-0.0680.059
ELF1ELF1 on ITI ELF1 on NCBI2391107010620.229-0.0760.083-0.101-0.077
PPP2R2BPPP2R2B on ITI PPP2R2B on NCBI351318-0.2000.124-0.0190.029-0.073
NFU1NFU1 on ITI NFU1 on NCBI23919639660.0320.2800.0230.085-0.257
RPL10LRPL10L on ITI RPL10L on NCBI165213561357-0.0840.056-0.0830.0690.084
WWC2WWC2 on ITI WWC2 on NCBI1652135613570.079-0.1770.303-0.0860.029
S100A13S100A13 on ITI S100A13 on NCBI1652135613570.0680.2860.0920.0190.045
SEC61A2SEC61A2 on ITI SEC61A2 on NCBI32652712800.105-0.035-0.072-0.115-0.073
SAP30SAP30 on ITI SAP30 on NCBI2391806806-0.0330.1860.0830.153-0.184
ZBTB17ZBTB17 on ITI ZBTB17 on NCBI23919379280.0940.0670.256-0.1450.255
PLK1PLK1 on ITI PLK1 on NCBI5148444440-0.1790.142-0.1430.094-0.163
BRD4BRD4 on ITI BRD4 on NCBI18261120.156-0.1190.095-0.075-0.044
S100A4S100A4 on ITI S100A4 on NCBI61202832820.0470.163-0.1160.0960.148
SKILSKIL on ITI SKIL on NCBI2391133613220.0450.2090.1080.073-0.020
PPP2R5EPPP2R5E on ITI PPP2R5E on NCBI32658168040.1600.0010.1910.0180.094
RUVBL1RUVBL1 on ITI RUVBL1 on NCBI165213561357-0.1730.112-0.1070.0490.027
SEC61A1SEC61A1 on ITI SEC61A1 on NCBI51482712670.085-0.1610.128-0.0960.070
NME1NME1 on ITI NME1 on NCBI71004924950.0540.2670.1060.046-0.035
CCNT1CCNT1 on ITI CCNT1 on NCBI182633320.1630.008-0.0280.162-0.213
SH3RF1SH3RF1 on ITI SH3RF1 on NCBI1442117120undef0.1440.238undefundef
BHLHB9BHLHB9 on ITI BHLHB9 on NCBI165213561357-0.070-0.0770.016-0.0100.039
KYNUKYNU on ITI KYNU on NCBI41986065970.161-0.2450.090-0.2940.047
CCNA1CCNA1 on ITI CCNA1 on NCBI1730326314-0.0780.1740.0920.078-0.098
PPP2R4PPP2R4 on ITI PPP2R4 on NCBI1652135613570.174-0.011-0.0130.054-0.129
H2AFXH2AFX on ITI H2AFX on NCBI4198117125-0.0860.111-0.0720.121-0.010
CLUCLU on ITI CLU on NCBI10671171210.280-0.2080.119-0.153-0.234
GAKGAK on ITI GAK on NCBI32658168040.134-0.0080.127-0.1620.090
TGFB1I1TGFB1I1 on ITI TGFB1I1 on NCBI16343263150.176-0.1050.2290.1430.298
FGD1FGD1 on ITI FGD1 on NCBI1652135613570.0000.008-0.131-0.053-0.074
NCOR2NCOR2 on ITI NCOR2 on NCBI11592832740.024-0.0960.211-0.1630.114
MRPL44MRPL44 on ITI MRPL44 on NCBI165213561357-0.1370.175-0.191-0.1450.037
S100A2S100A2 on ITI S100A2 on NCBI1652135613570.0380.0050.0470.137-0.008
RPL5RPL5 on ITI RPL5 on NCBI4198889873-0.145-0.0000.1280.220-0.110
IQGAP2IQGAP2 on ITI IQGAP2 on NCBI16341171190.264-0.170-0.051-0.1120.049
GDI1GDI1 on ITI GDI1 on NCBI165213561357-0.1000.2190.0940.0490.049
RB1RB1 on ITI RB1 on NCBI26182712630.2000.013-0.0510.057-0.082
RECQL4RECQL4 on ITI RECQL4 on NCBI2391283301-0.1430.039-0.2110.069-0.053
PPIGPPIG on ITI PPIG on NCBI32655635560.107-0.1160.0240.2210.101
PAK2PAK2 on ITI PAK2 on NCBI2024111-0.0190.0140.1610.0810.062
LLGL1LLGL1 on ITI LLGL1 on NCBI165213561357-0.082-0.040-0.163-0.141-0.018
MYO6MYO6 on ITI MYO6 on NCBI32659239090.197-0.0110.139-0.128-0.031
SP1SP1 on ITI SP1 on NCBI1634283272-0.1290.222-0.2540.2390.082
PRSS23PRSS23 on ITI PRSS23 on NCBI2391778789-0.0230.1330.0560.0600.092
TPM2TPM2 on ITI TPM2 on NCBI1652135613570.1470.0070.2690.2120.203
PIK3R1PIK3R1 on ITI PIK3R1 on NCBI911110.189-0.2370.3810.065-0.002
SKP2SKP2 on ITI SKP2 on NCBI1442148146-0.2280.092-0.0430.237-0.009
DNASE2DNASE2 on ITI DNASE2 on NCBI165213561357-0.1180.041-0.078-0.283-0.101
RNF8RNF8 on ITI RNF8 on NCBI2391117135-0.1150.2160.0040.1140.221
ADAM12ADAM12 on ITI ADAM12 on NCBI23918328310.015-0.1080.093-0.0160.201
CCNG1CCNG1 on ITI CCNG1 on NCBI41988168020.287-0.1000.061-0.157-0.093
MPGMPG on ITI MPG on NCBI1652135613570.1240.0430.044-0.2820.121
SUPT5HSUPT5H on ITI SUPT5H on NCBI977118-0.150-0.0850.007-0.298-0.068
KLF6KLF6 on ITI KLF6 on NCBI2391108410720.2950.1730.0010.0990.115
PRUNEPRUNE on ITI PRUNE on NCBI165213561357-0.1590.058-0.097-0.024-0.030
NR2F1NR2F1 on ITI NR2F1 on NCBI61204444380.086-0.2520.1130.1330.207
DOCK7DOCK7 on ITI DOCK7 on NCBI165213561357undef0.0430.032undefundef
PDCD6PDCD6 on ITI PDCD6 on NCBI4198444444undef0.091-0.060undefundef
IKBKEIKBKE on ITI IKBKE on NCBI884756726-0.0330.227-0.041-0.0950.079
PAX8PAX8 on ITI PAX8 on NCBI4198778766-0.0720.008-0.0830.032-0.002
IL7RIL7R on ITI IL7R on NCBI14423393340.130-0.151-0.112-0.130-0.160
S100A1S100A1 on ITI S100A1 on NCBI3265283292-0.0450.2440.0440.0130.063
HK2HK2 on ITI HK2 on NCBI165213561357-0.0240.2780.010-0.049-0.024
IRF8IRF8 on ITI IRF8 on NCBI1652135613570.141-0.007-0.193-0.050-0.067
ESR1ESR1 on ITI ESR1 on NCBI4198129212770.0460.026-0.002-0.053-0.062
OSBPL6OSBPL6 on ITI OSBPL6 on NCBI165213561357undef0.0280.135undefundef
CDKN2ACDKN2A on ITI CDKN2A on NCBI1067364351-0.0370.263-0.1130.111-0.105
MMEMME on ITI MME on NCBI88457540.200-0.1210.0200.088-0.130

GO Enrichment output for subnetwork 941 in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
regulation of lipid kinase activityGO:0043550GO:0043550 on GO2.038E-074.687E-04
actin filament-based movementGO:0030048GO:0030048 on GO7.151E-078.224E-04
myeloid cell differentiationGO:0030099GO:0030099 on GO8.716E-076.682E-04
syncytium formation by plasma membrane fusionGO:0000768GO:0000768 on GO1.198E-066.886E-04
filopodium assemblyGO:0046847GO:0046847 on GO1.869E-068.598E-04
syncytium formationGO:0006949GO:0006949 on GO1.869E-067.165E-04
ribosomal large subunit biogenesisGO:0042273GO:0042273 on GO2.784E-069.148E-04
microspike assemblyGO:0030035GO:0030035 on GO2.784E-068.005E-04
myotube differentiationGO:0014902GO:0014902 on GO5.553E-061.419E-03
nuclear migrationGO:0007097GO:0007097 on GO6.748E-061.552E-03
regulation of retinoic acid receptor signaling pathwayGO:0048385GO:0048385 on GO6.748E-061.411E-03


IPC file

NameAccession NumberLinkP-valCorrected P-val
regulation of lipid kinase activityGO:0043550GO:0043550 on GO9.984E-082.439E-04
actin filament-based movementGO:0030048GO:0030048 on GO1.666E-072.035E-04
establishment or maintenance of cell polarityGO:0007163GO:0007163 on GO2.024E-071.648E-04
myeloid cell differentiationGO:0030099GO:0030099 on GO2.07E-071.264E-04
syncytium formation by plasma membrane fusionGO:0000768GO:0000768 on GO2.966E-071.449E-04
syncytium formationGO:0006949GO:0006949 on GO4.638E-071.889E-04
ribosomal large subunit biogenesisGO:0042273GO:0042273 on GO9.952E-073.473E-04
myotube differentiationGO:0014902GO:0014902 on GO1.386E-064.234E-04
regulation of retinoic acid receptor signaling pathwayGO:0048385GO:0048385 on GO2.35E-066.378E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO2.35E-065.74E-04
leukocyte differentiationGO:0002521GO:0002521 on GO2.797E-066.212E-04


Loi file

NameAccession NumberLinkP-valCorrected P-val
regulation of lipid kinase activityGO:0043550GO:0043550 on GO6.904E-081.661E-04
establishment or maintenance of cell polarityGO:0007163GO:0007163 on GO1.701E-072.046E-04
actin filament-based movementGO:0030048GO:0030048 on GO1.891E-071.517E-04
myeloid cell differentiationGO:0030099GO:0030099 on GO2.85E-071.714E-04
syncytium formation by plasma membrane fusionGO:0000768GO:0000768 on GO4.077E-071.962E-04
syncytium formationGO:0006949GO:0006949 on GO6.373E-072.555E-04
ribosomal large subunit biogenesisGO:0042273GO:0042273 on GO1.366E-064.696E-04
myotube differentiationGO:0014902GO:0014902 on GO1.903E-065.722E-04
regulation of retinoic acid receptor signaling pathwayGO:0048385GO:0048385 on GO2.988E-067.987E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO2.988E-067.188E-04
filopodium assemblyGO:0046847GO:0046847 on GO3.423E-067.487E-04


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
regulation of lipid kinase activityGO:0043550GO:0043550 on GO2.038E-074.687E-04
actin filament-based movementGO:0030048GO:0030048 on GO7.151E-078.224E-04
myeloid cell differentiationGO:0030099GO:0030099 on GO8.716E-076.682E-04
syncytium formation by plasma membrane fusionGO:0000768GO:0000768 on GO1.198E-066.886E-04
filopodium assemblyGO:0046847GO:0046847 on GO1.869E-068.598E-04
syncytium formationGO:0006949GO:0006949 on GO1.869E-067.165E-04
ribosomal large subunit biogenesisGO:0042273GO:0042273 on GO2.784E-069.148E-04
microspike assemblyGO:0030035GO:0030035 on GO2.784E-068.005E-04
myotube differentiationGO:0014902GO:0014902 on GO5.553E-061.419E-03
nuclear migrationGO:0007097GO:0007097 on GO6.748E-061.552E-03
regulation of retinoic acid receptor signaling pathwayGO:0048385GO:0048385 on GO6.748E-061.411E-03


Wang file

NameAccession NumberLinkP-valCorrected P-val
regulation of lipid kinase activityGO:0043550GO:0043550 on GO2.038E-074.687E-04
actin filament-based movementGO:0030048GO:0030048 on GO7.151E-078.224E-04
myeloid cell differentiationGO:0030099GO:0030099 on GO8.716E-076.682E-04
syncytium formation by plasma membrane fusionGO:0000768GO:0000768 on GO1.198E-066.886E-04
filopodium assemblyGO:0046847GO:0046847 on GO1.869E-068.598E-04
syncytium formationGO:0006949GO:0006949 on GO1.869E-067.165E-04
ribosomal large subunit biogenesisGO:0042273GO:0042273 on GO2.784E-069.148E-04
microspike assemblyGO:0030035GO:0030035 on GO2.784E-068.005E-04
myotube differentiationGO:0014902GO:0014902 on GO5.553E-061.419E-03
nuclear migrationGO:0007097GO:0007097 on GO6.748E-061.552E-03
regulation of retinoic acid receptor signaling pathwayGO:0048385GO:0048385 on GO6.748E-061.411E-03


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