Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 1218

score

DatasetScoreP-val 1P-val 2P-val 3Fisher Score
Desmedt0.33241.574e-032.800e-051.654e-017.289e-09
IPC0.33933.514e-011.807e-019.362e-015.943e-02
Loi0.48373.900e-050.000e+004.983e-020.000e+00
Schmidt0.60191.000e-060.000e+001.090e-010.000e+00
Wang0.25707.733e-036.680e-022.311e-011.194e-04

Expression data for subnetwork 1218 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 1218 in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPCLoiSchmidtWang
UBL4AUBL4A on ITI UBL4A on NCBI1652620636-0.1050.196-0.0400.2190.062
EP300EP300 on ITI EP300 on NCBI713120.016-0.1490.0870.1020.025
EGFEGF on ITI EGF on NCBI1159398383-0.009-0.2120.182-0.2760.005
LMOD1LMOD1 on ITI LMOD1 on NCBI16526206360.287-0.0860.1830.1750.118
MEF2AMEF2A on ITI MEF2A on NCBI5148283287-0.1230.0220.0360.2650.124
CDKN1ACDKN1A on ITI CDKN1A on NCBI564130.0750.0640.2540.0300.082
SPSB1SPSB1 on ITI SPSB1 on NCBI71004924950.044-0.1240.088-0.1520.169
MAPK14MAPK14 on ITI MAPK14 on NCBI2391620618-0.1830.033-0.0650.2990.119
MECOMMECOM on ITI MECOM on NCBI16526206360.010-0.1290.1270.1380.055
CUL5CUL5 on ITI CUL5 on NCBI41984924990.1110.0510.1870.2210.216
PLAUPLAU on ITI PLAU on NCBI61204444380.2380.1870.1530.1410.192
GHRGHR on ITI GHR on NCBI1442148146-0.006-0.1120.1740.0900.201
BCL2BCL2 on ITI BCL2 on NCBI11593643500.067-0.077-0.0350.1280.043
BNIP3BNIP3 on ITI BNIP3 on NCBI1652620636-0.2070.1930.0710.1020.285
METMET on ITI MET on NCBI51485365360.119-0.2190.0860.1830.170
BAT3BAT3 on ITI BAT3 on NCBI2391444458-0.153-0.0780.072-0.0570.069
CDC25ACDC25A on ITI CDC25A on NCBI5148444440-0.2200.113-0.1700.151-0.003
SERPINB3SERPINB3 on ITI SERPINB3 on NCBI16526206360.190-0.1130.0840.2210.006
BRD4BRD4 on ITI BRD4 on NCBI18261120.156-0.1190.095-0.075-0.044
ZC4H2ZC4H2 on ITI ZC4H2 on NCBI1634339332-0.1450.0650.0610.3040.059
PIK3R1PIK3R1 on ITI PIK3R1 on NCBI911110.189-0.2370.3810.065-0.002
CUX1CUX1 on ITI CUX1 on NCBI8842712660.012-0.0420.256-0.1210.040
PKMYT1PKMYT1 on ITI PKMYT1 on NCBI51486206030.0850.175-0.1430.046-0.070
FLNAFLNA on ITI FLNA on NCBI71002061980.0770.0810.1070.1480.126
ODC1ODC1 on ITI ODC1 on NCBI5148398387-0.220-0.006-0.0990.209-0.107
CDK1CDK1 on ITI CDK1 on NCBI1634206194-0.1380.265-0.1950.1060.031
EGFREGFR on ITI EGFR on NCBI7221171170.064-0.1950.240-0.2050.065
MAPKAPK2MAPKAPK2 on ITI MAPKAPK2 on NCBI16526206360.0280.1490.1070.1410.009
CTSL1CTSL1 on ITI CTSL1 on NCBI32652832920.0760.187-0.0800.0910.178
NEDD8NEDD8 on ITI NEDD8 on NCBI32655365370.0830.250-0.0850.251-0.073
SMAD3SMAD3 on ITI SMAD3 on NCBI1652620636-0.024-0.1760.0630.239-0.012
CASP7CASP7 on ITI CASP7 on NCBI884283278-0.2700.2160.0950.2550.035
CCNT1CCNT1 on ITI CCNT1 on NCBI182633320.1630.008-0.0280.162-0.213
GRB7GRB7 on ITI GRB7 on NCBI13475751-0.0280.0210.115-0.0720.129
IGFBP5IGFBP5 on ITI IGFBP5 on NCBI32654444470.038-0.0760.1100.0740.181
CCNA1CCNA1 on ITI CCNA1 on NCBI1730326314-0.0780.1740.0920.078-0.098
PIAS2PIAS2 on ITI PIAS2 on NCBI3265620613-0.2700.039-0.0720.194-0.172
CPMCPM on ITI CPM on NCBI2391620618-0.1960.166-0.062-0.0790.280
ARAR on ITI AR on NCBI9772832770.089-0.1630.081-0.035-0.030
ACTBACTB on ITI ACTB on NCBI7100398385-0.052-0.0390.283-0.0610.003
IGF2IGF2 on ITI IGF2 on NCBI61205325140.261-0.0220.1720.1450.116
TGFB1I1TGFB1I1 on ITI TGFB1I1 on NCBI16343263150.176-0.1050.2290.1430.298
DOCK9DOCK9 on ITI DOCK9 on NCBI1652620636-0.086-0.0210.128-0.023-0.016
MEF2CMEF2C on ITI MEF2C on NCBI16526206360.000-0.062-0.0970.1120.132
USP13USP13 on ITI USP13 on NCBI1652620636-0.169-0.004-0.2680.1270.055

GO Enrichment output for subnetwork 1218 in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
neutrophil homeostasisGO:0001780GO:0001780 on GO2.545E-115.854E-08
pericardium developmentGO:0060039GO:0060039 on GO8.87E-111.02E-07
myeloid cell homeostasisGO:0002262GO:0002262 on GO2.355E-101.806E-07
leukocyte homeostasisGO:0001776GO:0001776 on GO1.526E-098.777E-07
post-embryonic developmentGO:0009791GO:0009791 on GO4.628E-092.129E-06
embryonic hindlimb morphogenesisGO:0035116GO:0035116 on GO1.226E-084.698E-06
embryonic forelimb morphogenesisGO:0035115GO:0035115 on GO1.226E-084.027E-06
forelimb morphogenesisGO:0035136GO:0035136 on GO2.504E-087.198E-06
hindlimb morphogenesisGO:0035137GO:0035137 on GO6.193E-081.583E-05
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.246E-077.465E-05
homeostasis of number of cellsGO:0048872GO:0048872 on GO9.58E-072.003E-04


IPC file

NameAccession NumberLinkP-valCorrected P-val
neutrophil homeostasisGO:0001780GO:0001780 on GO6.993E-121.708E-08
pericardium developmentGO:0060039GO:0060039 on GO2.439E-112.98E-08
myeloid cell homeostasisGO:0002262GO:0002262 on GO6.483E-115.279E-08
leukocyte homeostasisGO:0001776GO:0001776 on GO7.807E-104.768E-07
embryonic hindlimb morphogenesisGO:0035116GO:0035116 on GO4.923E-092.405E-06
post-embryonic developmentGO:0009791GO:0009791 on GO5.749E-092.341E-06
embryonic forelimb morphogenesisGO:0035115GO:0035115 on GO6.95E-092.426E-06
auditory receptor cell differentiationGO:0042491GO:0042491 on GO6.95E-092.122E-06
forelimb morphogenesisGO:0035136GO:0035136 on GO1.724E-084.68E-06
intra-Golgi vesicle-mediated transportGO:0006891GO:0006891 on GO2.909E-087.106E-06
hindlimb morphogenesisGO:0035137GO:0035137 on GO2.909E-086.46E-06


Loi file

NameAccession NumberLinkP-valCorrected P-val
neutrophil homeostasisGO:0001780GO:0001780 on GO9.309E-122.24E-08
pericardium developmentGO:0060039GO:0060039 on GO3.247E-113.906E-08
myeloid cell homeostasisGO:0002262GO:0002262 on GO8.627E-116.919E-08
leukocyte homeostasisGO:0001776GO:0001776 on GO8.347E-105.021E-07
embryonic hindlimb morphogenesisGO:0035116GO:0035116 on GO4.513E-092.172E-06
embryonic forelimb morphogenesisGO:0035115GO:0035115 on GO6.541E-092.623E-06
auditory receptor cell differentiationGO:0042491GO:0042491 on GO6.541E-092.248E-06
post-embryonic developmentGO:0009791GO:0009791 on GO6.648E-091.999E-06
forelimb morphogenesisGO:0035136GO:0035136 on GO1.723E-084.606E-06
inner ear receptor cell differentiationGO:0060113GO:0060113 on GO2.289E-085.507E-06
intra-Golgi vesicle-mediated transportGO:0006891GO:0006891 on GO2.994E-086.548E-06


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
neutrophil homeostasisGO:0001780GO:0001780 on GO2.545E-115.854E-08
pericardium developmentGO:0060039GO:0060039 on GO8.87E-111.02E-07
myeloid cell homeostasisGO:0002262GO:0002262 on GO2.355E-101.806E-07
leukocyte homeostasisGO:0001776GO:0001776 on GO1.526E-098.777E-07
post-embryonic developmentGO:0009791GO:0009791 on GO4.628E-092.129E-06
embryonic hindlimb morphogenesisGO:0035116GO:0035116 on GO1.226E-084.698E-06
embryonic forelimb morphogenesisGO:0035115GO:0035115 on GO1.226E-084.027E-06
forelimb morphogenesisGO:0035136GO:0035136 on GO2.504E-087.198E-06
hindlimb morphogenesisGO:0035137GO:0035137 on GO6.193E-081.583E-05
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.246E-077.465E-05
homeostasis of number of cellsGO:0048872GO:0048872 on GO9.58E-072.003E-04


Wang file

NameAccession NumberLinkP-valCorrected P-val
neutrophil homeostasisGO:0001780GO:0001780 on GO2.545E-115.854E-08
pericardium developmentGO:0060039GO:0060039 on GO8.87E-111.02E-07
myeloid cell homeostasisGO:0002262GO:0002262 on GO2.355E-101.806E-07
leukocyte homeostasisGO:0001776GO:0001776 on GO1.526E-098.777E-07
post-embryonic developmentGO:0009791GO:0009791 on GO4.628E-092.129E-06
embryonic hindlimb morphogenesisGO:0035116GO:0035116 on GO1.226E-084.698E-06
embryonic forelimb morphogenesisGO:0035115GO:0035115 on GO1.226E-084.027E-06
forelimb morphogenesisGO:0035136GO:0035136 on GO2.504E-087.198E-06
hindlimb morphogenesisGO:0035137GO:0035137 on GO6.193E-081.583E-05
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.246E-077.465E-05
homeostasis of number of cellsGO:0048872GO:0048872 on GO9.58E-072.003E-04


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