Study run-a2

Study informations

103 subnetworks in total page | file

306 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 2932-3-real

score

DatasetScoreP-val 1P-val 2P-val 3
Desmedt0.20321.554e-021.235e-021.232e-01
IPC-NIBC-1290.26873.426e-025.010e-023.464e-01
Ivshina_GPL96-GPL970.22845.904e-031.028e-022.020e-01
Loi_GPL5700.25205.695e-026.457e-022.421e-01
Loi_GPL96-GPL970.16611.000e-069.000e-061.000e-06
Parker_GPL13900.26406.401e-027.859e-024.495e-01
Parker_GPL8870.10553.526e-013.713e-013.834e-01
Pawitan_GPL96-GPL970.34345.157e-014.434e-019.704e-01
Schmidt0.22571.030e-021.136e-021.464e-01
Sotiriou0.30041.475e-021.142e-022.345e-01
Van-De-Vijver0.28441.226e-031.765e-036.724e-02
Zhang0.31081.224e-017.842e-022.601e-01
Zhou0.40897.731e-026.673e-024.366e-01

Expression data for subnetwork 2932-3-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Van-De-Vijver | Zhang | Zhou |

Subnetwork structure for each dataset

Score for each gene in subnetwork 2932-3-real in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPC-NIBC-129Ivshina_GPL96-GPL97Loi_GPL570Loi_GPL96-GPL97Parker_GPL1390Parker_GPL887Pawitan_GPL96-GPL97SchmidtSotiriouVan-De-VijverZhangZhou
cdkn3CDKN3 on ITI CDKN3 on NCBI53529220.1140.2690.1990.1360.1930.166-0.0090.3230.1860.1980.2010.2710.372
pcnaPCNA on ITI PCNA on NCBI1511110850.0960.2020.1090.1800.1180.1190.1040.2560.1510.0590.2010.1230.233
fen1FEN1 on ITI FEN1 on NCBI9221331120.0450.1940.1690.1960.1360.2520.0330.3320.2210.1440.2420.0560.114
stmn2STMN2 on ITI STMN2 on NCBI29934270.0570.1060.0050.0520.1100.071-0.0990.0060.0340.1030.0080.113-0.039
notch1NOTCH1 on ITI NOTCH1 on NCBI3621331250.0880.293-0.017-0.1790.0660.1720.1760.0610.0870.0300.082-0.0620.218
gsk3bGSK3B on ITI GSK3B on NCBI2781331290.0570.0030.0580.0290.1540.025-0.462-0.0680.1190.0700.1880.1460.093
ccnd1CCND1 on ITI CCND1 on NCBI92218120.127-0.1830.0620.1900.157-0.002-0.1900.105-0.1070.174undef0.1440.290
tsc1TSC1 on ITI TSC1 on NCBI58418130.0490.012-0.0550.0720.055-0.144-0.242-0.1960.0060.0100.095-0.0070.207
cdc2CDC2 on ITI CDC2 on NCBI961110.0730.2470.2060.1720.2470.153-0.1310.2820.2260.2210.1620.2970.336
sfnSFN on ITI SFN on NCBI613120.0770.1370.1110.1720.1120.1190.1410.2190.1000.1470.1580.0790.181

GO Enrichment output for subnetwork 2932-3-real in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO6.293E-081.447E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO5.392E-076.2E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO7.173E-075.499E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.951E-062.847E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO5.947E-062.736E-03
anagenGO:0042640GO:0042640 on GO5.947E-062.28E-03
positive regulation of Rho GTPase activityGO:0032321GO:0032321 on GO5.947E-061.954E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO5.947E-061.71E-03
response to UVGO:0009411GO:0009411 on GO6.081E-061.554E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO8.917E-062.051E-03
ER overload responseGO:0006983GO:0006983 on GO8.917E-061.864E-03


IPC-NIBC-129 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.066E-082.604E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO1.933E-072.362E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO2.715E-072.211E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.123E-066.856E-04
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO1.898E-069.275E-04
anagenGO:0042640GO:0042640 on GO1.898E-067.729E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO1.898E-066.625E-04
stem cell divisionGO:0017145GO:0017145 on GO1.898E-065.797E-04
response to UVGO:0009411GO:0009411 on GO1.935E-065.253E-04
hair follicle maturationGO:0048820GO:0048820 on GO2.847E-066.954E-04
activation of Ras GTPase activityGO:0032856GO:0032856 on GO2.847E-066.322E-04


Ivshina_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.549E-083.727E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO2.284E-072.747E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO3.25E-072.606E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.498E-069.009E-04
response to UVGO:0009411GO:0009411 on GO2.307E-061.11E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO2.313E-069.276E-04
anagenGO:0042640GO:0042640 on GO2.313E-067.951E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO2.313E-066.957E-04
activation of Ras GTPase activityGO:0032856GO:0032856 on GO2.313E-066.184E-04
stem cell divisionGO:0017145GO:0017145 on GO2.313E-065.566E-04
hair follicle maturationGO:0048820GO:0048820 on GO3.469E-067.588E-04


Loi_GPL570 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.066E-082.604E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO1.933E-072.362E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO2.715E-072.211E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.123E-066.856E-04
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO1.898E-069.275E-04
anagenGO:0042640GO:0042640 on GO1.898E-067.729E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO1.898E-066.625E-04
stem cell divisionGO:0017145GO:0017145 on GO1.898E-065.797E-04
response to UVGO:0009411GO:0009411 on GO1.935E-065.253E-04
hair follicle maturationGO:0048820GO:0048820 on GO2.847E-066.954E-04
activation of Ras GTPase activityGO:0032856GO:0032856 on GO2.847E-066.322E-04


Loi_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.549E-083.727E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO2.284E-072.747E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO3.25E-072.606E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.498E-069.009E-04
response to UVGO:0009411GO:0009411 on GO2.307E-061.11E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO2.313E-069.276E-04
anagenGO:0042640GO:0042640 on GO2.313E-067.951E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO2.313E-066.957E-04
activation of Ras GTPase activityGO:0032856GO:0032856 on GO2.313E-066.184E-04
stem cell divisionGO:0017145GO:0017145 on GO2.313E-065.566E-04
hair follicle maturationGO:0048820GO:0048820 on GO3.469E-067.588E-04


Parker_GPL1390 file

NameAccession NumberLinkP-valCorrected P-val
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO8.812E-093.147E-05
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.46E-082.607E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO4.069E-074.843E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO5.124E-074.574E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO2.361E-061.686E-03
response to UVGO:0009411GO:0009411 on GO2.863E-061.704E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO3.314E-061.69E-03
MutLalpha complex bindingGO:0032405GO:0032405 on GO3.314E-061.479E-03
ribonuclease H activityGO:0004523GO:0004523 on GO3.314E-061.315E-03
negative regulation of myoblast differentiationGO:0045662GO:0045662 on GO3.314E-061.183E-03
endodeoxyribonuclease activity. producing 5'-phosphomonoestersGO:0016888GO:0016888 on GO3.314E-061.076E-03


Parker_GPL887 file

NameAccession NumberLinkP-valCorrected P-val
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO8.439E-093.078E-05
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.59E-082.899E-05
growth coneGO:0030426GO:0030426 on GO3.034E-073.69E-04
site of polarized growthGO:0030427GO:0030427 on GO3.447E-073.144E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO3.895E-072.842E-04
fat cell differentiationGO:0045444GO:0045444 on GO4.381E-072.664E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO5.469E-072.85E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.839E-068.386E-04
response to UVGO:0009411GO:0009411 on GO2.113E-068.565E-04
regulation of protein export from nucleusGO:0046825GO:0046825 on GO3.136E-061.144E-03
ribonuclease H activityGO:0004523GO:0004523 on GO3.136E-061.04E-03


Pawitan_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.549E-083.727E-05
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO2.284E-072.747E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO3.25E-072.606E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.498E-069.009E-04
response to UVGO:0009411GO:0009411 on GO2.307E-061.11E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO2.313E-069.276E-04
anagenGO:0042640GO:0042640 on GO2.313E-067.951E-04
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO2.313E-066.957E-04
activation of Ras GTPase activityGO:0032856GO:0032856 on GO2.313E-066.184E-04
stem cell divisionGO:0017145GO:0017145 on GO2.313E-065.566E-04
hair follicle maturationGO:0048820GO:0048820 on GO3.469E-067.588E-04


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO6.293E-081.447E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO5.392E-076.2E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO7.173E-075.499E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.951E-062.847E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO5.947E-062.736E-03
anagenGO:0042640GO:0042640 on GO5.947E-062.28E-03
positive regulation of Rho GTPase activityGO:0032321GO:0032321 on GO5.947E-061.954E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO5.947E-061.71E-03
response to UVGO:0009411GO:0009411 on GO6.081E-061.554E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO8.917E-062.051E-03
ER overload responseGO:0006983GO:0006983 on GO8.917E-061.864E-03


Sotiriou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO6.293E-081.447E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO5.392E-076.2E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO7.173E-075.499E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.951E-062.847E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO5.947E-062.736E-03
anagenGO:0042640GO:0042640 on GO5.947E-062.28E-03
positive regulation of Rho GTPase activityGO:0032321GO:0032321 on GO5.947E-061.954E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO5.947E-061.71E-03
response to UVGO:0009411GO:0009411 on GO6.081E-061.554E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO8.917E-062.051E-03
ER overload responseGO:0006983GO:0006983 on GO8.917E-061.864E-03


Van-De-Vijver file

NameAccession NumberLinkP-valCorrected P-val
hair follicle maturationGO:0048820GO:0048820 on GO1.181E-050.02176916
regulation of myoblast differentiationGO:0045661GO:0045661 on GO1.181E-050.01088458
positive regulation of epidermis developmentGO:0045684GO:0045684 on GO1.181E-057.256E-03
regulation of epidermal cell differentiationGO:0045604GO:0045604 on GO1.181E-055.442E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO1.181E-054.354E-03
phosphoinositide-mediated signalingGO:0048015GO:0048015 on GO1.431E-054.397E-03
positive regulation of cell growthGO:0030307GO:0030307 on GO1.771E-054.662E-03
ER overload responseGO:0006983GO:0006983 on GO1.771E-054.079E-03
peptidyl-serine phosphorylationGO:0018105GO:0018105 on GO1.771E-053.626E-03
regulation of focal adhesion formationGO:0051893GO:0051893 on GO1.771E-053.263E-03
regulation of Rho GTPase activityGO:0032319GO:0032319 on GO1.771E-052.967E-03


Zhang file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO6.293E-081.447E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO5.392E-076.2E-04
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO7.173E-075.499E-04
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.951E-062.847E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO5.947E-062.736E-03
anagenGO:0042640GO:0042640 on GO5.947E-062.28E-03
positive regulation of Rho GTPase activityGO:0032321GO:0032321 on GO5.947E-061.954E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO5.947E-061.71E-03
response to UVGO:0009411GO:0009411 on GO6.081E-061.554E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO8.917E-062.051E-03
ER overload responseGO:0006983GO:0006983 on GO8.917E-061.864E-03


Zhou file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.042E-072.474E-04
response to endoplasmic reticulum stressGO:0034976GO:0034976 on GO1.038E-061.232E-03
ER-nuclear signaling pathwayGO:0006984GO:0006984 on GO1.332E-061.054E-03
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO6.723E-063.988E-03
negative regulation of protein ubiquitinationGO:0031397GO:0031397 on GO6.867E-063.259E-03
anagenGO:0042640GO:0042640 on GO6.867E-062.716E-03
negative regulation of myoblast differentiationGO:0045662GO:0045662 on GO6.867E-062.328E-03
regulation of keratinocyte differentiationGO:0045616GO:0045616 on GO6.867E-062.037E-03
ectodermal gut morphogenesisGO:0048567GO:0048567 on GO6.867E-061.811E-03
response to UVGO:0009411GO:0009411 on GO8.218E-061.95E-03
regulation of protein export from nucleusGO:0046825GO:0046825 on GO1.029E-052.221E-03


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