Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5501-6-real
score
Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
Desmedt | 0.2056 | 1.507e-02 | 1.805e-02 | 1.341e-01 |
IPC-NIBC-129 | 0.2715 | 6.358e-02 | 8.208e-02 | 5.266e-01 |
Ivshina_GPL96-GPL97 | 0.2283 | 4.938e-03 | 8.161e-03 | 1.690e-01 |
Loi_GPL570 | 0.2759 | 4.581e-02 | 4.546e-02 | 2.388e-01 |
Loi_GPL96-GPL97 | 0.1432 | 5.000e-06 | 3.300e-05 | 2.300e-05 |
Parker_GPL1390 | 0.2407 | 9.092e-02 | 8.987e-02 | 5.163e-01 |
Parker_GPL887 | 0.2134 | 3.269e-01 | 3.613e-01 | 3.350e-01 |
Pawitan_GPL96-GPL97 | 0.3430 | 9.502e-02 | 6.893e-02 | 5.024e-01 |
Schmidt | 0.2502 | 4.946e-03 | 7.278e-03 | 7.451e-02 |
Sotiriou | 0.3579 | 2.756e-03 | 8.180e-04 | 6.685e-02 |
Wang | 0.0612 | 1.449e-01 | 1.060e-01 | 4.621e-01 |
Zhang | 0.2761 | 5.313e-01 | 4.805e-01 | 8.287e-01 |
Zhou | 0.4070 | 7.206e-02 | 7.736e-02 | 4.327e-01 |
Expression data for subnetwork 5501-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt

Score for each gene in subnetwork 5501-6-real in each dataset
Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
cdkn1a |  | 70 | 3 | 73 | 51 | 0.115 | -0.020 | 0.065 | 0.082 | 0.099 | 0.124 | 0.055 | 0.087 | 0.068 | 0.144 | 0.015 | -0.201 | 0.069 |
tle1 |  | 23 | 9 | 78 | 60 | 0.062 | 0.235 | -0.032 | -0.177 | 0.033 | 0.085 | 0.339 | 0.068 | 0.126 | -0.027 | -0.028 | 0.068 | 0.025 |
plk1 |  | 6 | 43 | 141 | 122 | 0.067 | 0.281 | 0.012 | 0.128 | 0.123 | 0.100 | 0.577 | 0.100 | 0.190 | 0.044 | 0.028 | 0.040 | 0.410 |
ppp1cc |  | 1 | 164 | 182 | 189 | -0.018 | 0.128 | 0.031 | -0.053 | 0.090 | 0.086 | -0.229 | -0.015 | -0.077 | 0.026 | 0.207 | 0.064 | 0.246 |
ccnb1 |  | 36 | 7 | 78 | 59 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.099 | 0.126 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 | 0.398 |
prkci |  | 12 | 20 | 31 | 19 | 0.065 | 0.104 | 0.012 | 0.170 | 0.112 | 0.088 | -0.103 | -0.170 | 0.196 | 0.128 | -0.054 | 0.124 | 0.149 |
ccnd1 |  | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
cdc2 |  | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
gabbr1 |  | 6 | 43 | 88 | 77 | 0.003 | -0.016 | -0.022 | -0.051 | 0.082 | 0.119 | 0.584 | -0.082 | 0.049 | 0.057 | 0.011 | 0.096 | 0.116 |
mark4 |  | 5 | 50 | 182 | 159 | 0.114 | 0.070 | 0.091 | 0.001 | 0.086 | -0.135 | 0.437 | -0.005 | 0.027 | 0.084 | 0.059 | 0.074 | 0.104 |
nfatc4 |  | 8 | 33 | 31 | 25 | 0.094 | -0.056 | -0.021 | 0.204 | 0.079 | -0.008 | 0.243 | 0.060 | 0.077 | -0.012 | 0.080 | 0.131 | 0.154 |
psmd10 |  | 2 | 104 | 182 | 176 | -0.028 | 0.099 | 0.108 | 0.130 | 0.137 | 0.119 | 0.148 | 0.153 | 0.061 | 0.191 | 0.075 | 0.135 | 0.184 |
tubb |  | 8 | 33 | 93 | 80 | 0.107 | 0.221 | 0.070 | 0.090 | 0.095 | 0.278 | -0.325 | 0.185 | 0.139 | 0.202 | -0.061 | -0.142 | 0.101 |
ywhaz |  | 11 | 21 | 31 | 20 | 0.124 | 0.089 | 0.087 | 0.200 | 0.141 | 0.110 | 0.228 | 0.199 | 0.056 | 0.123 | -0.026 | 0.103 | 0.213 |
psmb3 |  | 5 | 50 | 150 | 138 | 0.080 | 0.214 | 0.172 | 0.037 | 0.177 | -0.031 | -0.058 | 0.133 | 0.154 | 0.132 | 0.038 | 0.047 | 0.059 |
cdc25a |  | 9 | 27 | 109 | 90 | -0.019 | 0.221 | 0.093 | 0.158 | 0.120 | -0.061 | 0.406 | 0.207 | 0.211 | 0.016 | 0.069 | 0.183 | 0.264 |
sfn |  | 50 | 4 | 29 | 17 | 0.077 | 0.137 | 0.111 | 0.172 | 0.112 | 0.119 | 0.141 | 0.219 | 0.100 | 0.147 | 0.025 | 0.079 | 0.181 |
GO Enrichment output for subnetwork 5501-6-real in each dataset
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 5.252E-11 | 1.208E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.316E-09 | 1.514E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.596E-09 | 1.223E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.136E-09 | 1.228E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.136E-09 | 9.824E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.083E-09 | 1.182E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 3.439E-09 | 1.13E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.674E-09 | 1.056E-06 |
regulation of ligase activity | GO:0051340 |  | 5.138E-09 | 1.313E-06 |
cell killing | GO:0001906 |  | 1.039E-08 | 2.39E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.855E-08 | 8.061E-06 |
IPC-NIBC-129 file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 6.867E-12 | 1.677E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.561E-10 | 1.907E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.029E-10 | 1.652E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.029E-10 | 1.239E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 2.872E-10 | 1.403E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.067E-10 | 1.249E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.59E-10 | 1.253E-07 |
regulation of ligase activity | GO:0051340 |  | 5.228E-10 | 1.596E-07 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 6.759E-10 | 1.835E-07 |
cell killing | GO:0001906 |  | 1.859E-09 | 4.543E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 5.586E-09 | 1.241E-06 |
Ivshina_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 9.627E-12 | 2.316E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.545E-10 | 3.061E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 3.308E-10 | 2.653E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 3.308E-10 | 1.99E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 4.026E-10 | 1.937E-07 |
positive regulation of ligase activity | GO:0051351 |  | 4.997E-10 | 2.004E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.849E-10 | 2.01E-07 |
regulation of ligase activity | GO:0051340 |  | 8.515E-10 | 2.561E-07 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 9.472E-10 | 2.532E-07 |
cell killing | GO:0001906 |  | 2.605E-09 | 6.268E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 8.444E-09 | 1.847E-06 |
Loi_GPL570 file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 6.867E-12 | 1.677E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.561E-10 | 1.907E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.029E-10 | 1.652E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.029E-10 | 1.239E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 2.872E-10 | 1.403E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.067E-10 | 1.249E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.59E-10 | 1.253E-07 |
regulation of ligase activity | GO:0051340 |  | 5.228E-10 | 1.596E-07 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 6.759E-10 | 1.835E-07 |
cell killing | GO:0001906 |  | 1.859E-09 | 4.543E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 5.586E-09 | 1.241E-06 |
Loi_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 9.627E-12 | 2.316E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.545E-10 | 3.061E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 3.308E-10 | 2.653E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 3.308E-10 | 1.99E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 4.026E-10 | 1.937E-07 |
positive regulation of ligase activity | GO:0051351 |  | 4.997E-10 | 2.004E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.849E-10 | 2.01E-07 |
regulation of ligase activity | GO:0051340 |  | 8.515E-10 | 2.561E-07 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 9.472E-10 | 2.532E-07 |
cell killing | GO:0001906 |  | 2.605E-09 | 6.268E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 8.444E-09 | 1.847E-06 |
Parker_GPL1390 file
Name | Accession Number | Link | P-val | Corrected P-val |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.556E-09 | 5.557E-06 |
G2/M transition of mitotic cell cycle | GO:0000086 |  | 2.188E-09 | 3.907E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 5.551E-09 | 6.608E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 6.01E-09 | 5.366E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 7.018E-09 | 5.013E-06 |
positive regulation of ligase activity | GO:0051351 |  | 8.157E-09 | 4.855E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 1.014E-08 | 5.171E-06 |
regulation of ligase activity | GO:0051340 |  | 1.335E-08 | 5.96E-06 |
interphase of mitotic cell cycle | GO:0051329 |  | 1.964E-08 | 7.794E-06 |
cyclin-dependent protein kinase holoenzyme complex | GO:0000307 |  | 5.864E-08 | 2.094E-05 |
G1/S transition of mitotic cell cycle | GO:0000082 |  | 1.472E-07 | 4.779E-05 |
Parker_GPL887 file
Name | Accession Number | Link | P-val | Corrected P-val |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.661E-11 | 6.061E-08 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.005E-11 | 3.658E-08 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.198E-11 | 2.673E-08 |
positive regulation of ligase activity | GO:0051351 |  | 2.631E-11 | 2.399E-08 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.03E-11 | 2.94E-08 |
regulation of ligase activity | GO:0051340 |  | 5.133E-11 | 3.121E-08 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 7.407E-10 | 3.86E-07 |
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 2.028E-09 | 9.25E-07 |
proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 |  | 9E-09 | 3.648E-06 |
cyclin-dependent protein kinase holoenzyme complex | GO:0000307 |  | 3.474E-08 | 1.267E-05 |
cyclin-dependent protein kinase regulator activity | GO:0016538 |  | 2.25E-07 | 7.463E-05 |
Pawitan_GPL96-GPL97 file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 9.627E-12 | 2.316E-08 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.545E-10 | 3.061E-07 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 3.308E-10 | 2.653E-07 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 3.308E-10 | 1.99E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 4.026E-10 | 1.937E-07 |
positive regulation of ligase activity | GO:0051351 |  | 4.997E-10 | 2.004E-07 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 5.849E-10 | 2.01E-07 |
regulation of ligase activity | GO:0051340 |  | 8.515E-10 | 2.561E-07 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 9.472E-10 | 2.532E-07 |
cell killing | GO:0001906 |  | 2.605E-09 | 6.268E-07 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 8.444E-09 | 1.847E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 5.252E-11 | 1.208E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.316E-09 | 1.514E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.596E-09 | 1.223E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.136E-09 | 1.228E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.136E-09 | 9.824E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.083E-09 | 1.182E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 3.439E-09 | 1.13E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.674E-09 | 1.056E-06 |
regulation of ligase activity | GO:0051340 |  | 5.138E-09 | 1.313E-06 |
cell killing | GO:0001906 |  | 1.039E-08 | 2.39E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.855E-08 | 8.061E-06 |
Sotiriou file
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 5.252E-11 | 1.208E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.316E-09 | 1.514E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.596E-09 | 1.223E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.136E-09 | 1.228E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.136E-09 | 9.824E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.083E-09 | 1.182E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 3.439E-09 | 1.13E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.674E-09 | 1.056E-06 |
regulation of ligase activity | GO:0051340 |  | 5.138E-09 | 1.313E-06 |
cell killing | GO:0001906 |  | 1.039E-08 | 2.39E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.855E-08 | 8.061E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 5.252E-11 | 1.208E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.316E-09 | 1.514E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.596E-09 | 1.223E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.136E-09 | 1.228E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.136E-09 | 9.824E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.083E-09 | 1.182E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 3.439E-09 | 1.13E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.674E-09 | 1.056E-06 |
regulation of ligase activity | GO:0051340 |  | 5.138E-09 | 1.313E-06 |
cell killing | GO:0001906 |  | 1.039E-08 | 2.39E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.855E-08 | 8.061E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 5.252E-11 | 1.208E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.316E-09 | 1.514E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 1.596E-09 | 1.223E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.136E-09 | 1.228E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.136E-09 | 9.824E-07 |
positive regulation of ligase activity | GO:0051351 |  | 3.083E-09 | 1.182E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 3.439E-09 | 1.13E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 3.674E-09 | 1.056E-06 |
regulation of ligase activity | GO:0051340 |  | 5.138E-09 | 1.313E-06 |
cell killing | GO:0001906 |  | 1.039E-08 | 2.39E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.855E-08 | 8.061E-06 |
Name | Accession Number | Link | P-val | Corrected P-val |
spindle assembly | GO:0051225 |  | 1.202E-10 | 2.853E-07 |
natural killer cell mediated immunity | GO:0002228 |  | 1.006E-09 | 1.194E-06 |
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 |  | 2.287E-09 | 1.809E-06 |
leukocyte mediated cytotoxicity | GO:0001909 |  | 2.628E-09 | 1.559E-06 |
positive regulation of ubiquitin-protein ligase activity | GO:0051443 |  | 2.959E-09 | 1.404E-06 |
regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 |  | 2.959E-09 | 1.17E-06 |
positive regulation of ligase activity | GO:0051351 |  | 3.785E-09 | 1.283E-06 |
regulation of ubiquitin-protein ligase activity | GO:0051438 |  | 4.795E-09 | 1.422E-06 |
regulation of ligase activity | GO:0051340 |  | 6.018E-09 | 1.587E-06 |
cell killing | GO:0001906 |  | 7.943E-09 | 1.885E-06 |
regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 3.384E-08 | 7.3E-06 |