Study run-a1

Study informations

119 subnetworks in total page | file

406 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 5501-6-real

score

DatasetScoreP-val 1P-val 2P-val 3
Desmedt0.20561.507e-021.805e-021.341e-01
IPC-NIBC-1290.27156.358e-028.208e-025.266e-01
Ivshina_GPL96-GPL970.22834.938e-038.161e-031.690e-01
Loi_GPL5700.27594.581e-024.546e-022.388e-01
Loi_GPL96-GPL970.14325.000e-063.300e-052.300e-05
Parker_GPL13900.24079.092e-028.987e-025.163e-01
Parker_GPL8870.21343.269e-013.613e-013.350e-01
Pawitan_GPL96-GPL970.34309.502e-026.893e-025.024e-01
Schmidt0.25024.946e-037.278e-037.451e-02
Sotiriou0.35792.756e-038.180e-046.685e-02
Wang0.06121.449e-011.060e-014.621e-01
Zhang0.27615.313e-014.805e-018.287e-01
Zhou0.40707.206e-027.736e-024.327e-01

Expression data for subnetwork 5501-6-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |

Subnetwork structure for each dataset

Score for each gene in subnetwork 5501-6-real in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPC-NIBC-129Ivshina_GPL96-GPL97Loi_GPL570Loi_GPL96-GPL97Parker_GPL1390Parker_GPL887Pawitan_GPL96-GPL97SchmidtSotiriouWangZhangZhou
cdkn1aCDKN1A on ITI CDKN1A on NCBI70373510.115-0.0200.0650.0820.0990.1240.0550.0870.0680.1440.015-0.2010.069
tle1TLE1 on ITI TLE1 on NCBI23978600.0620.235-0.032-0.1770.0330.0850.3390.0680.126-0.027-0.0280.0680.025
plk1PLK1 on ITI PLK1 on NCBI6431411220.0670.2810.0120.1280.1230.1000.5770.1000.1900.0440.0280.0400.410
ppp1ccPPP1CC on ITI PPP1CC on NCBI1164182189-0.0180.1280.031-0.0530.0900.086-0.229-0.015-0.0770.0260.2070.0640.246
ccnb1CCNB1 on ITI CCNB1 on NCBI36778590.0820.2460.2120.2240.2560.0990.1260.3510.1290.2490.1520.1670.398
prkciPRKCI on ITI PRKCI on NCBI122031190.0650.1040.0120.1700.1120.088-0.103-0.1700.1960.128-0.0540.1240.149
ccnd1CCND1 on ITI CCND1 on NCBI1022120.127-0.1830.0620.1900.157-0.002-0.1900.105-0.1070.1740.1060.1440.290
cdc2CDC2 on ITI CDC2 on NCBI1031110.0730.2470.2060.1720.2470.153-0.1310.2820.2260.2210.0670.2970.336
gabbr1GABBR1 on ITI GABBR1 on NCBI64388770.003-0.016-0.022-0.0510.0820.1190.584-0.0820.0490.0570.0110.0960.116
mark4MARK4 on ITI MARK4 on NCBI5501821590.1140.0700.0910.0010.086-0.1350.437-0.0050.0270.0840.0590.0740.104
nfatc4NFATC4 on ITI NFATC4 on NCBI83331250.094-0.056-0.0210.2040.079-0.0080.2430.0600.077-0.0120.0800.1310.154
psmd10PSMD10 on ITI PSMD10 on NCBI2104182176-0.0280.0990.1080.1300.1370.1190.1480.1530.0610.1910.0750.1350.184
tubbTUBB on ITI TUBB on NCBI83393800.1070.2210.0700.0900.0950.278-0.3250.1850.1390.202-0.061-0.1420.101
ywhazYWHAZ on ITI YWHAZ on NCBI112131200.1240.0890.0870.2000.1410.1100.2280.1990.0560.123-0.0260.1030.213
psmb3PSMB3 on ITI PSMB3 on NCBI5501501380.0800.2140.1720.0370.177-0.031-0.0580.1330.1540.1320.0380.0470.059
cdc25aCDC25A on ITI CDC25A on NCBI92710990-0.0190.2210.0930.1580.120-0.0610.4060.2070.2110.0160.0690.1830.264
sfnSFN on ITI SFN on NCBI50429170.0770.1370.1110.1720.1120.1190.1410.2190.1000.1470.0250.0790.181

GO Enrichment output for subnetwork 5501-6-real in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO5.252E-111.208E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.316E-091.514E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.596E-091.223E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.136E-091.228E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.136E-099.824E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.083E-091.182E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO3.439E-091.13E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.674E-091.056E-06
regulation of ligase activityGO:0051340GO:0051340 on GO5.138E-091.313E-06
cell killingGO:0001906GO:0001906 on GO1.039E-082.39E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.855E-088.061E-06


IPC-NIBC-129 file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO6.867E-121.677E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.561E-101.907E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.029E-101.652E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.029E-101.239E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO2.872E-101.403E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.067E-101.249E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.59E-101.253E-07
regulation of ligase activityGO:0051340GO:0051340 on GO5.228E-101.596E-07
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO6.759E-101.835E-07
cell killingGO:0001906GO:0001906 on GO1.859E-094.543E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO5.586E-091.241E-06


Ivshina_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO9.627E-122.316E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO2.545E-103.061E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO3.308E-102.653E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO3.308E-101.99E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO4.026E-101.937E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO4.997E-102.004E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO5.849E-102.01E-07
regulation of ligase activityGO:0051340GO:0051340 on GO8.515E-102.561E-07
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO9.472E-102.532E-07
cell killingGO:0001906GO:0001906 on GO2.605E-096.268E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO8.444E-091.847E-06


Loi_GPL570 file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO6.867E-121.677E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.561E-101.907E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.029E-101.652E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.029E-101.239E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO2.872E-101.403E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.067E-101.249E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.59E-101.253E-07
regulation of ligase activityGO:0051340GO:0051340 on GO5.228E-101.596E-07
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO6.759E-101.835E-07
cell killingGO:0001906GO:0001906 on GO1.859E-094.543E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO5.586E-091.241E-06


Loi_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO9.627E-122.316E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO2.545E-103.061E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO3.308E-102.653E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO3.308E-101.99E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO4.026E-101.937E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO4.997E-102.004E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO5.849E-102.01E-07
regulation of ligase activityGO:0051340GO:0051340 on GO8.515E-102.561E-07
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO9.472E-102.532E-07
cell killingGO:0001906GO:0001906 on GO2.605E-096.268E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO8.444E-091.847E-06


Parker_GPL1390 file

NameAccession NumberLinkP-valCorrected P-val
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.556E-095.557E-06
G2/M transition of mitotic cell cycleGO:0000086GO:0000086 on GO2.188E-093.907E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO5.551E-096.608E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO6.01E-095.366E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO7.018E-095.013E-06
positive regulation of ligase activityGO:0051351GO:0051351 on GO8.157E-094.855E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO1.014E-085.171E-06
regulation of ligase activityGO:0051340GO:0051340 on GO1.335E-085.96E-06
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO1.964E-087.794E-06
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO5.864E-082.094E-05
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO1.472E-074.779E-05


Parker_GPL887 file

NameAccession NumberLinkP-valCorrected P-val
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.661E-116.061E-08
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.005E-113.658E-08
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.198E-112.673E-08
positive regulation of ligase activityGO:0051351GO:0051351 on GO2.631E-112.399E-08
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO4.03E-112.94E-08
regulation of ligase activityGO:0051340GO:0051340 on GO5.133E-113.121E-08
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO7.407E-103.86E-07
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processGO:0031145GO:0031145 on GO2.028E-099.25E-07
proteasomal ubiquitin-dependent protein catabolic processGO:0043161GO:0043161 on GO9E-093.648E-06
cyclin-dependent protein kinase holoenzyme complexGO:0000307GO:0000307 on GO3.474E-081.267E-05
cyclin-dependent protein kinase regulator activityGO:0016538GO:0016538 on GO2.25E-077.463E-05


Pawitan_GPL96-GPL97 file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO9.627E-122.316E-08
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO2.545E-103.061E-07
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO3.308E-102.653E-07
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO3.308E-101.99E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO4.026E-101.937E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO4.997E-102.004E-07
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO5.849E-102.01E-07
regulation of ligase activityGO:0051340GO:0051340 on GO8.515E-102.561E-07
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO9.472E-102.532E-07
cell killingGO:0001906GO:0001906 on GO2.605E-096.268E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO8.444E-091.847E-06


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO5.252E-111.208E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.316E-091.514E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.596E-091.223E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.136E-091.228E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.136E-099.824E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.083E-091.182E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO3.439E-091.13E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.674E-091.056E-06
regulation of ligase activityGO:0051340GO:0051340 on GO5.138E-091.313E-06
cell killingGO:0001906GO:0001906 on GO1.039E-082.39E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.855E-088.061E-06


Sotiriou file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO5.252E-111.208E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.316E-091.514E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.596E-091.223E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.136E-091.228E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.136E-099.824E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.083E-091.182E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO3.439E-091.13E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.674E-091.056E-06
regulation of ligase activityGO:0051340GO:0051340 on GO5.138E-091.313E-06
cell killingGO:0001906GO:0001906 on GO1.039E-082.39E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.855E-088.061E-06


Wang file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO5.252E-111.208E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.316E-091.514E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.596E-091.223E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.136E-091.228E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.136E-099.824E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.083E-091.182E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO3.439E-091.13E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.674E-091.056E-06
regulation of ligase activityGO:0051340GO:0051340 on GO5.138E-091.313E-06
cell killingGO:0001906GO:0001906 on GO1.039E-082.39E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.855E-088.061E-06


Zhang file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO5.252E-111.208E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.316E-091.514E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO1.596E-091.223E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.136E-091.228E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.136E-099.824E-07
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.083E-091.182E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO3.439E-091.13E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO3.674E-091.056E-06
regulation of ligase activityGO:0051340GO:0051340 on GO5.138E-091.313E-06
cell killingGO:0001906GO:0001906 on GO1.039E-082.39E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.855E-088.061E-06


Zhou file

NameAccession NumberLinkP-valCorrected P-val
spindle assemblyGO:0051225GO:0051225 on GO1.202E-102.853E-07
natural killer cell mediated immunityGO:0002228GO:0002228 on GO1.006E-091.194E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051437GO:0051437 on GO2.287E-091.809E-06
leukocyte mediated cytotoxicityGO:0001909GO:0001909 on GO2.628E-091.559E-06
positive regulation of ubiquitin-protein ligase activityGO:0051443GO:0051443 on GO2.959E-091.404E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycleGO:0051439GO:0051439 on GO2.959E-091.17E-06
positive regulation of ligase activityGO:0051351GO:0051351 on GO3.785E-091.283E-06
regulation of ubiquitin-protein ligase activityGO:0051438GO:0051438 on GO4.795E-091.422E-06
regulation of ligase activityGO:0051340GO:0051340 on GO6.018E-091.587E-06
cell killingGO:0001906GO:0001906 on GO7.943E-091.885E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.384E-087.3E-06


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