Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 3796-4-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.2580 | 4.576e-03 | 5.433e-03 | 5.442e-02 |
|---|
| IPC-NIBC-129 | 0.2388 | 2.654e-02 | 3.229e-02 | 2.849e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2861 | 5.360e-03 | 8.786e-03 | 1.784e-01 |
|---|
| Loi_GPL570 | 0.2721 | 7.163e-02 | 7.116e-02 | 3.300e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1487 | 3.000e-06 | 2.600e-05 | 1.500e-05 |
|---|
| Parker_GPL1390 | 0.3039 | 4.331e-02 | 3.987e-02 | 3.476e-01 |
|---|
| Parker_GPL887 | 0.1400 | 5.152e-01 | 5.485e-01 | 5.527e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3392 | 1.680e-01 | 1.335e-01 | 6.878e-01 |
|---|
| Schmidt | 0.2541 | 5.236e-03 | 7.687e-03 | 7.808e-02 |
|---|
| Sotiriou | 0.3545 | 1.365e-03 | 3.370e-04 | 3.996e-02 |
|---|
| Wang | 0.0824 | 1.326e-01 | 9.559e-02 | 4.374e-01 |
|---|
| Zhang | 0.2200 | 4.043e-01 | 3.475e-01 | 7.104e-01 |
|---|
| Zhou | 0.4492 | 7.470e-02 | 8.046e-02 | 4.452e-01 |
|---|
Expression data for subnetwork 3796-4-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 3796-4-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
|---|
| klc2 |   | 1 | 164 | 115 | 132 | 0.036 | -0.030 | 0.148 | 0.074 | 0.099 | 0.019 | 0.066 | 0.141 | 0.025 | 0.198 | 0.139 | 0.098 | 0.185 |
|---|
| kif2a | | 1 | 164 | 115 | 132 | 0.127 | 0.198 | 0.170 | 0.047 | 0.106 | 0.117 | 0.041 | 0.167 | 0.083 | 0.112 | 0.045 | -0.119 | 0.177 |
|---|
| rgs3 | | 1 | 164 | 115 | 132 | 0.048 | 0.195 | 0.029 | 0.052 | 0.056 | 0.192 | -0.052 | -0.078 | 0.033 | 0.023 | 0.070 | 0.100 | -0.196 |
|---|
| mlf1ip | | 5 | 50 | 53 | 47 | 0.182 | 0.147 | 0.186 | 0.144 | 0.242 | 0.266 | 0.005 | 0.345 | 0.182 | 0.197 | 0.172 | 0.240 | 0.372 |
|---|
| ccnd1 | | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
|---|
| tsc1 | | 47 | 5 | 17 | 8 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.144 | -0.242 | -0.196 | 0.006 | 0.010 | 0.043 | -0.007 | 0.207 |
|---|
| orc6l | | 8 | 33 | 73 | 61 | 0.094 | 0.270 | 0.084 | 0.114 | 0.106 | 0.240 | 0.256 | 0.234 | 0.192 | 0.105 | 0.086 | 0.175 | 0.160 |
|---|
| map4 | | 16 | 13 | 73 | 55 | 0.002 | 0.046 | 0.067 | -0.043 | 0.034 | 0.119 | 0.159 | -0.058 | -0.020 | 0.043 | 0.108 | -0.074 | 0.302 |
|---|
| cdc2 | | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
|---|
| mlf1 | | 5 | 50 | 53 | 47 | 0.027 | 0.224 | 0.053 | 0.047 | 0.169 | 0.128 | 0.021 | -0.028 | 0.106 | 0.176 | 0.126 | 0.098 | 0.141 |
|---|
| nfatc4 | | 8 | 33 | 31 | 25 | 0.094 | -0.056 | -0.021 | 0.204 | 0.079 | -0.008 | 0.243 | 0.060 | 0.077 | -0.012 | 0.080 | 0.131 | 0.154 |
|---|
| ywhaz | | 11 | 21 | 31 | 20 | 0.124 | 0.089 | 0.087 | 0.200 | 0.141 | 0.110 | 0.228 | 0.199 | 0.056 | 0.123 | -0.026 | 0.103 | 0.213 |
|---|
| hspb1 | | 19 | 11 | 17 | 11 | 0.190 | -0.050 | 0.184 | 0.212 | 0.231 | -0.026 | -0.065 | 0.289 | -0.021 | 0.201 | 0.125 | -0.077 | 0.290 |
|---|
| mapkapk2 | | 13 | 19 | 17 | 12 | -0.050 | 0.102 | 0.156 | -0.116 | 0.090 | 0.168 | 0.303 | 0.074 | 0.171 | 0.117 | 0.085 | -0.124 | 0.312 |
|---|
| ifi27 | | 2 | 104 | 109 | 110 | 0.089 | 0.086 | 0.105 | 0.055 | 0.101 | 0.007 | 0.360 | 0.149 | 0.129 | 0.045 | -0.074 | 0.118 | 0.194 |
|---|
| pctk1 | | 1 | 164 | 115 | 132 | 0.008 | 0.100 | 0.114 | 0.157 | 0.107 | -0.240 | -0.303 | 0.010 | 0.044 | 0.143 | -0.010 | 0.128 | 0.250 |
|---|
| pax6 | | 1 | 164 | 115 | 132 | 0.036 | 0.231 | -0.065 | 0.113 | 0.068 | 0.137 | 0.081 | -0.018 | 0.179 | 0.131 | 0.071 | 0.070 | -0.140 |
|---|
GO Enrichment output for subnetwork 3796-4-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 |  | 7.997E-08 | 1.839E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.308E-06 | 1.505E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 4.409E-06 | 3.38E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.925E-06 | 5.132E-03 |
|---|
| sperm motility | GO:0030317 | | 1.576E-05 | 7.248E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.824E-05 | 0.01082693 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.818E-05 | 0.01254377 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 4.107E-05 | 0.01180757 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.107E-05 | 0.01049562 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.107E-05 | 9.446E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.593E-05 | 9.603E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 2.457E-08 | 6.003E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.973E-07 | 8.518E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.361E-06 | 1.109E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 6.26E-06 | 3.823E-03 |
|---|
| sperm motility | GO:0030317 | | 7.872E-06 | 3.846E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.187E-05 | 4.834E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.702E-05 | 5.941E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.857E-05 | 5.67E-03 |
|---|
| DNA replication. synthesis of RNA primer | GO:0006269 | | 1.857E-05 | 5.04E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.857E-05 | 4.536E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.721E-05 | 6.044E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.791E-08 | 9.121E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.074E-06 | 1.293E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 2.097E-06 | 1.682E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 7.511E-06 | 4.518E-03 |
|---|
| sperm motility | GO:0030317 | | 8.526E-06 | 4.103E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.824E-05 | 7.315E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.48E-05 | 8.523E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 2.48E-05 | 7.458E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.48E-05 | 6.629E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.614E-05 | 6.29E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 3.881E-05 | 8.489E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 2.457E-08 | 6.003E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.973E-07 | 8.518E-04 |
|---|
| fructose metabolic process | GO:0006000 | | 1.361E-06 | 1.109E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 6.26E-06 | 3.823E-03 |
|---|
| sperm motility | GO:0030317 | | 7.872E-06 | 3.846E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.187E-05 | 4.834E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 1.702E-05 | 5.941E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.857E-05 | 5.67E-03 |
|---|
| DNA replication. synthesis of RNA primer | GO:0006269 | | 1.857E-05 | 5.04E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.857E-05 | 4.536E-03 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 2.721E-05 | 6.044E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.791E-08 | 9.121E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.074E-06 | 1.293E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 2.097E-06 | 1.682E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 7.511E-06 | 4.518E-03 |
|---|
| sperm motility | GO:0030317 | | 8.526E-06 | 4.103E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.824E-05 | 7.315E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.48E-05 | 8.523E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 2.48E-05 | 7.458E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.48E-05 | 6.629E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.614E-05 | 6.29E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 3.881E-05 | 8.489E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| microtubule associated complex | GO:0005875 | | 2.279E-06 | 8.138E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.657E-06 | 0.01724252 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.448E-05 | 0.01723237 |
|---|
| nuclear origin of replication recognition complex | GO:0005664 | | 1.448E-05 | 0.01292428 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.448E-05 | 0.01033942 |
|---|
| regulation of phosphoprotein phosphatase activity | GO:0043666 | | 2.026E-05 | 0.01205556 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.026E-05 | 0.01033334 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 2.699E-05 | 0.01204847 |
|---|
| microtubule motor activity | GO:0003777 | | 3.268E-05 | 0.0129663 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.468E-05 | 0.01238543 |
|---|
| response to unfolded protein | GO:0006986 | | 3.759E-05 | 0.01220237 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cyclin-dependent protein kinase activity | GO:0004693 | | 7.648E-06 | 0.02789869 |
|---|
| microtubule associated complex | GO:0005875 | | 1.085E-05 | 0.01978698 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.998E-05 | 0.02429527 |
|---|
| origin recognition complex | GO:0000808 | | 1.998E-05 | 0.01822145 |
|---|
| positive regulation of cell-matrix adhesion | GO:0001954 | | 1.998E-05 | 0.01457716 |
|---|
| RNA polymerase II carboxy-terminal domain kinase activity | GO:0008353 | | 1.998E-05 | 0.01214763 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.994E-05 | 0.01560448 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.994E-05 | 0.01365392 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.994E-05 | 0.01213682 |
|---|
| regulation of actin filament bundle formation | GO:0032231 | | 5.579E-05 | 0.02035357 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 5.579E-05 | 0.01850325 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 3.791E-08 | 9.121E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.074E-06 | 1.293E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 2.097E-06 | 1.682E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 7.511E-06 | 4.518E-03 |
|---|
| sperm motility | GO:0030317 | | 8.526E-06 | 4.103E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.824E-05 | 7.315E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 2.48E-05 | 8.523E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 2.48E-05 | 7.458E-03 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.48E-05 | 6.629E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2.614E-05 | 6.29E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 3.881E-05 | 8.489E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.997E-08 | 1.839E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.308E-06 | 1.505E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 4.409E-06 | 3.38E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.925E-06 | 5.132E-03 |
|---|
| sperm motility | GO:0030317 | | 1.576E-05 | 7.248E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.824E-05 | 0.01082693 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.818E-05 | 0.01254377 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 4.107E-05 | 0.01180757 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.107E-05 | 0.01049562 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.107E-05 | 9.446E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.593E-05 | 9.603E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.997E-08 | 1.839E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.308E-06 | 1.505E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 4.409E-06 | 3.38E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.925E-06 | 5.132E-03 |
|---|
| sperm motility | GO:0030317 | | 1.576E-05 | 7.248E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.824E-05 | 0.01082693 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.818E-05 | 0.01254377 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 4.107E-05 | 0.01180757 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.107E-05 | 0.01049562 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.107E-05 | 9.446E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.593E-05 | 9.603E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.997E-08 | 1.839E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.308E-06 | 1.505E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 4.409E-06 | 3.38E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.925E-06 | 5.132E-03 |
|---|
| sperm motility | GO:0030317 | | 1.576E-05 | 7.248E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.824E-05 | 0.01082693 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.818E-05 | 0.01254377 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 4.107E-05 | 0.01180757 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.107E-05 | 0.01049562 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.107E-05 | 9.446E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.593E-05 | 9.603E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.997E-08 | 1.839E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.308E-06 | 1.505E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 4.409E-06 | 3.38E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.925E-06 | 5.132E-03 |
|---|
| sperm motility | GO:0030317 | | 1.576E-05 | 7.248E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.824E-05 | 0.01082693 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.818E-05 | 0.01254377 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 4.107E-05 | 0.01180757 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.107E-05 | 0.01049562 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.107E-05 | 9.446E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.593E-05 | 9.603E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 5.433E-08 | 1.289E-04 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 1.185E-06 | 1.406E-03 |
|---|
| fructose metabolic process | GO:0006000 | | 3.64E-06 | 2.879E-03 |
|---|
| alditol metabolic process | GO:0019400 | | 8.192E-06 | 4.86E-03 |
|---|
| sperm motility | GO:0030317 | | 1.376E-05 | 6.531E-03 |
|---|
| hexose biosynthetic process | GO:0019319 | | 2.364E-05 | 9.352E-03 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 3.136E-05 | 0.01063106 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.175E-05 | 9.417E-03 |
|---|
| polyol metabolic process | GO:0019751 | | 4.057E-05 | 0.01069648 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 4.757E-05 | 0.01128803 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 4.757E-05 | 0.01026185 |
|---|
