Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 574

score

Expression data for subnetwork 574 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 574 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC	Loi	Schmidt	Wang
EP300		71	3	1	2	0.016	-0.149	0.087	0.102	0.025
TEK		7	100	148	155	0.063	-0.149	-0.049	0.174	0.113
FAF2		2	391	148	171	-0.093	0.027	0.212	-0.070	0.195
FOXO1		4	198	148	162	0.278	0.072	0.094	-0.021	0.221
SF3B1		15	40	148	144	0.091	-0.154	0.126	-0.073	-0.204
SUMO2		12	55	148	150	0.003	0.117	0.062	0.294	-0.096
TP53		28	15	1	9	0.015	-0.167	0.148	-0.027	0.147
IGF2BP2		3	265	148	166	0.124	0.210	-0.002	0.098	-0.122
TMEM132A		7	100	33	37	0.088	0.019	0.127	-0.141	-0.092
NPLOC4		2	391	148	171	-0.146	-0.237	-0.168	0.106	0.019
UBXN7		6	120	148	156	0.049	-0.055	0.153	0.224	0.175
CCND1		12	55	148	150	0.122	-0.258	0.074	0.117	0.003
CCNA2		15	40	148	144	-0.097	0.176	-0.053	0.188	0.246
TACC2		9	77	148	154	-0.151	-0.073	0.122	0.181	0.180
MYC		24	21	148	137	-0.056	-0.101	-0.169	0.188	-0.134
DPYSL2		3	265	148	166	0.050	-0.095	-0.037	0.296	0.104
GHR		14	42	148	146	-0.006	-0.112	0.174	0.090	0.201
RBM6		10	67	148	152	-0.036	-0.082	0.265	-0.004	0.111
MYB		3	265	148	166	-0.054	-0.028	0.075	0.002	-0.012
PTPRK		6	120	148	156	0.008	0.156	0.141	-0.094	-0.024
MN1		6	120	148	156	0.213	-0.166	-0.047	0.150	0.011
SKP2		14	42	148	146	-0.228	0.092	-0.043	0.237	-0.009
ZFPM2		4	198	148	162	0.160	0.001	0.092	0.113	0.379
SMYD2		4	198	148	162	0.032	0.260	0.068	0.179	0.191
VEGFA		28	15	57	49	-0.074	0.090	0.200	0.030	0.148
FOS		20	24	148	138	0.060	-0.137	0.129	0.185	0.234
MAP1B		13	47	148	148	0.118	-0.123	0.263	-0.107	0.100
DPYSL3		2	391	148	171	0.113	-0.065	0.133	0.021	0.261
TPR		10	67	148	152	0.118	-0.130	0.120	-0.036	0.156
INSR		47	7	1	5	0.135	0.063	0.173	0.135	-0.072
WDR11		1	652	148	185	-0.145	-0.032	-0.033	0.186	0.162
HIF1A		21	23	33	31	0.246	-0.098	0.224	-0.118	0.356
LUC7L3		13	47	148	148	0.123	0.043	0.237	0.175	0.074
TUBB2B		5	148	148	161	0.048	-0.036	0.304	0.045	0.139
GSK3B		47	7	33	28	0.117	-0.130	0.292	-0.129	0.057
TIE1		6	120	148	156	0.094	-0.108	0.005	0.141	0.252
ANP32E		6	120	148	156	-0.114	0.166	-0.139	0.191	0.118
FIP1L1		1	652	148	185	-0.146	0.173	-0.002	0.204	-0.116
CDK2		16	34	129	124	-0.104	0.196	-0.096	0.109	0.362
HSPB1		4	198	148	162	0.121	0.053	0.169	0.017	0.161
ACTL6A		1	652	148	185	-0.214	0.095	-0.069	0.193	0.040
IFI16		1	652	148	185	0.021	0.134	-0.026	0.110	-0.051

GO Enrichment output for subnetwork 574 in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of glycolysis	GO:0045821		7.538E-07	1.734E-03
ER overload response	GO:0006983		1.503E-06	1.728E-03
positive regulation of vascular endothelial growth factor receptor signaling pathway	GO:0030949		1.503E-06	1.152E-03
regulation of DNA metabolic process	GO:0051052		1.701E-06	9.782E-04
response to endoplasmic reticulum stress	GO:0034976		1.769E-06	8.138E-04
regulation of DNA replication	GO:0006275		1.882E-06	7.216E-04
positive regulation of cell migration	GO:0030335		2.557E-06	8.4E-04
ER-nuclear signaling pathway	GO:0006984		2.601E-06	7.477E-04
peptidyl-tyrosine phosphorylation	GO:0018108		2.601E-06	6.646E-04
peptidyl-amino acid modification	GO:0018193		2.886E-06	6.637E-04
peptidyl-tyrosine modification	GO:0018212		3.691E-06	7.718E-04

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of glycolysis	GO:0045821		2.494E-07	6.093E-04
regulation of DNA metabolic process	GO:0051052		4.571E-07	5.584E-04
regulation of DNA replication	GO:0006275		6.924E-07	5.639E-04
positive regulation of cell migration	GO:0030335		8.267E-07	5.049E-04
peptidyl-tyrosine phosphorylation	GO:0018108		1.022E-06	4.995E-04
response to endoplasmic reticulum stress	GO:0034976		1.022E-06	4.162E-04
ER overload response	GO:0006983		1.388E-06	4.843E-04
positive regulation of vascular endothelial growth factor receptor signaling pathway	GO:0030949		1.388E-06	4.238E-04
peptidyl-tyrosine modification	GO:0018212		1.394E-06	3.783E-04
positive regulation of cell motion	GO:0051272		1.466E-06	3.582E-04
ER-nuclear signaling pathway	GO:0006984		1.613E-06	3.583E-04

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of glycolysis	GO:0045821		3.325E-07	8E-04
regulation of DNA metabolic process	GO:0051052		7.912E-07	9.518E-04
regulation of DNA replication	GO:0006275		1.102E-06	8.839E-04
positive regulation of cell migration	GO:0030335		1.205E-06	7.248E-04
response to endoplasmic reticulum stress	GO:0034976		1.265E-06	6.088E-04
peptidyl-tyrosine phosphorylation	GO:0018108		1.491E-06	5.981E-04
regulation of homeostatic process	GO:0032844		1.839E-06	6.319E-04
ER overload response	GO:0006983		1.849E-06	5.561E-04
positive regulation of vascular endothelial growth factor receptor signaling pathway	GO:0030949		1.849E-06	4.943E-04
ER-nuclear signaling pathway	GO:0006984		2.032E-06	4.89E-04
peptidyl-tyrosine modification	GO:0018212		2.032E-06	4.446E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of glycolysis	GO:0045821		7.538E-07	1.734E-03
ER overload response	GO:0006983		1.503E-06	1.728E-03
positive regulation of vascular endothelial growth factor receptor signaling pathway	GO:0030949		1.503E-06	1.152E-03
regulation of DNA metabolic process	GO:0051052		1.701E-06	9.782E-04
response to endoplasmic reticulum stress	GO:0034976		1.769E-06	8.138E-04
regulation of DNA replication	GO:0006275		1.882E-06	7.216E-04
positive regulation of cell migration	GO:0030335		2.557E-06	8.4E-04
ER-nuclear signaling pathway	GO:0006984		2.601E-06	7.477E-04
peptidyl-tyrosine phosphorylation	GO:0018108		2.601E-06	6.646E-04
peptidyl-amino acid modification	GO:0018193		2.886E-06	6.637E-04
peptidyl-tyrosine modification	GO:0018212		3.691E-06	7.718E-04

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of glycolysis	GO:0045821		7.538E-07	1.734E-03
ER overload response	GO:0006983		1.503E-06	1.728E-03
positive regulation of vascular endothelial growth factor receptor signaling pathway	GO:0030949		1.503E-06	1.152E-03
regulation of DNA metabolic process	GO:0051052		1.701E-06	9.782E-04
response to endoplasmic reticulum stress	GO:0034976		1.769E-06	8.138E-04
regulation of DNA replication	GO:0006275		1.882E-06	7.216E-04
positive regulation of cell migration	GO:0030335		2.557E-06	8.4E-04
ER-nuclear signaling pathway	GO:0006984		2.601E-06	7.477E-04
peptidyl-tyrosine phosphorylation	GO:0018108		2.601E-06	6.646E-04
peptidyl-amino acid modification	GO:0018193		2.886E-06	6.637E-04
peptidyl-tyrosine modification	GO:0018212		3.691E-06	7.718E-04