Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 1202

score

DatasetScoreP-val 1P-val 2P-val 3Fisher Score
Desmedt0.33141.643e-033.000e-051.685e-018.304e-09
IPC0.34383.438e-011.741e-019.346e-015.596e-02
Loi0.48234.200e-050.000e+005.050e-020.000e+00
Schmidt0.60221.000e-060.000e+001.083e-010.000e+00
Wang0.25757.591e-036.603e-022.292e-011.149e-04

Expression data for subnetwork 1202 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 1202 in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPCLoiSchmidtWang
EP300EP300 on ITI EP300 on NCBI713120.016-0.1490.0870.1020.025
ARHGAP26ARHGAP26 on ITI ARHGAP26 on NCBI5148444440-0.145-0.0230.171-0.222-0.348
BTCBTC on ITI BTC on NCBI32653984040.1390.2260.025-0.097-0.059
CASP3CASP3 on ITI CASP3 on NCBI4198129130-0.0150.234-0.032-0.142-0.084
PAX6PAX6 on ITI PAX6 on NCBI11592832740.0810.259-0.0030.1120.168
SORBS1SORBS1 on ITI SORBS1 on NCBI17301821780.124-0.0430.0150.3140.200
PSMA3PSMA3 on ITI PSMA3 on NCBI2391444458-0.0330.116-0.149-0.0080.014
UBA1UBA1 on ITI UBA1 on NCBI16524444760.013-0.1090.204-0.166-0.169
AGRNAGRN on ITI AGRN on NCBI16524444760.121-0.0550.341-0.106-0.024
ADAM10ADAM10 on ITI ADAM10 on NCBI16524444760.080-0.0360.0690.151-0.086
RETRET on ITI RET on NCBI41985768-0.0690.0980.063-0.179-0.159
EGFEGF on ITI EGF on NCBI1159398383-0.009-0.2120.182-0.2760.005
ID4ID4 on ITI ID4 on NCBI1347444430-0.060-0.1790.1370.2410.036
CDKN1ACDKN1A on ITI CDKN1A on NCBI564130.0750.0640.2540.0300.082
PDGFBPDGFB on ITI PDGFB on NCBI23914444580.1000.0200.0460.0850.338
CCNE1CCNE1 on ITI CCNE1 on NCBI1652444476-0.2080.245-0.141-0.077-0.018
CCND1CCND1 on ITI CCND1 on NCBI12551481500.122-0.2580.0740.1170.003
CREBBPCREBBP on ITI CREBBP on NCBI51484444400.084-0.1040.1020.0930.002
NELL2NELL2 on ITI NELL2 on NCBI23914444580.134-0.0050.1380.4210.074
DLL1DLL1 on ITI DLL1 on NCBI1652444476undef-0.1560.068undefundef
PLAUPLAU on ITI PLAU on NCBI61204444380.2380.1870.1530.1410.192
CTGFCTGF on ITI CTGF on NCBI106757520.106-0.1690.1810.1260.209
CNKSR3CNKSR3 on ITI CNKSR3 on NCBI1652444476undef0.083-0.132undefundef
TWIST1TWIST1 on ITI TWIST1 on NCBI32654444470.1660.0440.1940.0610.219
BAT3BAT3 on ITI BAT3 on NCBI2391444458-0.153-0.0780.072-0.0570.069
KITKIT on ITI KIT on NCBI1347339335-0.034-0.130-0.0910.235-0.059
PDGFRBPDGFRB on ITI PDGFRB on NCBI32652622700.009-0.0940.2240.1270.189
HOXC10HOXC10 on ITI HOXC10 on NCBI41984444440.044-0.0150.116-0.133-0.017
PTPRKPTPRK on ITI PTPRK on NCBI61201481560.0080.1560.141-0.094-0.024
PLK1PLK1 on ITI PLK1 on NCBI5148444440-0.1790.142-0.1430.094-0.163
AKT1AKT1 on ITI AKT1 on NCBI1347444430-0.0120.0450.126-0.099-0.168
GABPAGABPA on ITI GABPA on NCBI61202062000.0190.033-0.1830.066-0.161
S100A4S100A4 on ITI S100A4 on NCBI61202832820.0470.163-0.1160.0960.148
TGFATGFA on ITI TGFA on NCBI8844394290.077-0.057-0.027-0.1580.020
VEGFAVEGFA on ITI VEGFA on NCBI28155749-0.0740.0900.2000.0300.148
CDK1CDK1 on ITI CDK1 on NCBI1634206194-0.1380.265-0.1950.1060.031
SRSF1SRSF1 on ITI SRSF1 on NCBI1652444476-0.3530.065-0.0770.127-0.085
PGFPGF on ITI PGF on NCBI1652444476-0.011-0.0120.0590.0050.072
EIF4EBP1EIF4EBP1 on ITI EIF4EBP1 on NCBI3265444447-0.0300.086-0.201-0.1470.216
GSK3BGSK3B on ITI GSK3B on NCBI47733280.117-0.1300.292-0.1290.057
TCL1ATCL1A on ITI TCL1A on NCBI16524444760.111-0.152-0.1660.090-0.066
PPARGC1APPARGC1A on ITI PPARGC1A on NCBI2391444458-0.1770.066-0.1230.2430.112
SRPK1SRPK1 on ITI SRPK1 on NCBI1652444476-0.1620.085-0.0100.1430.191
TGFB1I1TGFB1I1 on ITI TGFB1I1 on NCBI16343263150.176-0.1050.2290.1430.298
FABP4FABP4 on ITI FABP4 on NCBI32654444470.091-0.036-0.0280.2270.107
PCSK5PCSK5 on ITI PCSK5 on NCBI16524444760.1220.0210.0740.1210.092
SNCGSNCG on ITI SNCG on NCBI1652444476-0.2260.080-0.0860.088-0.226
RGS16RGS16 on ITI RGS16 on NCBI2391444458-0.0480.2020.009-0.0040.283
NCOR2NCOR2 on ITI NCOR2 on NCBI11592832740.024-0.0960.211-0.1630.114
PLSCR4PLSCR4 on ITI PLSCR4 on NCBI23914444580.223-0.0690.1400.2310.212
MCM10MCM10 on ITI MCM10 on NCBI3265444447-0.0330.178-0.2450.015-0.063
EGR1EGR1 on ITI EGR1 on NCBI11592832740.118-0.1840.2590.1300.122
GSTT1GSTT1 on ITI GSTT1 on NCBI6120364355-0.0340.1480.107-0.190-0.064
SPIBSPIB on ITI SPIB on NCBI1652444476-0.094-0.034-0.202-0.070-0.179
PNO1PNO1 on ITI PNO1 on NCBI1652444476-0.1180.090-0.052-0.092-0.138
RND1RND1 on ITI RND1 on NCBI23914444580.158-0.0460.0850.0220.113
TOP2ATOP2A on ITI TOP2A on NCBI2391444458-0.1850.193-0.1680.0540.071
RB1RB1 on ITI RB1 on NCBI26182712630.2000.013-0.0510.057-0.082
CYR61CYR61 on ITI CYR61 on NCBI239157800.1090.0180.2060.2030.234
SMOXSMOX on ITI SMOX on NCBI23914444580.040-0.2320.276-0.0890.023
MYCMYC on ITI MYC on NCBI2421148137-0.056-0.101-0.1690.188-0.134
GHRGHR on ITI GHR on NCBI1442148146-0.006-0.1120.1740.0900.201
GANGAN on ITI GAN on NCBI2391444458-0.0050.1450.250-0.086-0.026
WT1WT1 on ITI WT1 on NCBI884283278-0.1060.254-0.0390.0360.172
PSMD11PSMD11 on ITI PSMD11 on NCBI23914444580.0850.088-0.090-0.137-0.078
BCL2BCL2 on ITI BCL2 on NCBI11593643500.067-0.077-0.0350.1280.043
GFRA1GFRA1 on ITI GFRA1 on NCBI23915780-0.0230.011-0.0670.2920.029
S100A6S100A6 on ITI S100A6 on NCBI1652444476-0.0390.2680.0280.1100.058
SP1SP1 on ITI SP1 on NCBI1634283272-0.1290.222-0.2540.2390.082
CDC25ACDC25A on ITI CDC25A on NCBI5148444440-0.2200.113-0.1700.151-0.003
ERGERG on ITI ERG on NCBI23914444580.065-0.134-0.0260.2350.182
ZC4H2ZC4H2 on ITI ZC4H2 on NCBI1634339332-0.1450.0650.0610.3040.059
PIK3R1PIK3R1 on ITI PIK3R1 on NCBI911110.189-0.2370.3810.065-0.002
TBRG4TBRG4 on ITI TBRG4 on NCBI2391444458-0.0660.173-0.060-0.073-0.055
ALAS2ALAS2 on ITI ALAS2 on NCBI1652444476undef-0.1130.057undefundef
FANCAFANCA on ITI FANCA on NCBI32655771-0.1310.120-0.1880.106-0.053
NR2F1NR2F1 on ITI NR2F1 on NCBI61204444380.086-0.2520.1130.1330.207
EGFREGFR on ITI EGFR on NCBI7221171170.064-0.1950.240-0.2050.065
MAP1BMAP1B on ITI MAP1B on NCBI13471481480.118-0.1230.263-0.1070.100
PDCD6PDCD6 on ITI PDCD6 on NCBI4198444444undef0.091-0.060undefundef
INSRINSR on ITI INSR on NCBI477150.1350.0630.1730.135-0.072
SEC23IPSEC23IP on ITI SEC23IP on NCBI1652444476-0.1940.033-0.006-0.033-0.055
HIF1AHIF1A on ITI HIF1A on NCBI212333310.246-0.0980.224-0.1180.356
IGFBP5IGFBP5 on ITI IGFBP5 on NCBI32654444470.038-0.0760.1100.0740.181
GRB7GRB7 on ITI GRB7 on NCBI13475751-0.0280.0210.115-0.0720.129
S100A1S100A1 on ITI S100A1 on NCBI3265283292-0.0450.2440.0440.0130.063
PMLPML on ITI PML on NCBI16524444760.106-0.068-0.010-0.007-0.070
ARAR on ITI AR on NCBI9772832770.089-0.1630.081-0.035-0.030
ATN1ATN1 on ITI ATN1 on NCBI2391444458-0.149-0.005-0.0930.005-0.136
HIPK3HIPK3 on ITI HIPK3 on NCBI2391283301-0.1030.0690.005-0.0270.175
CDKN2ACDKN2A on ITI CDKN2A on NCBI1067364351-0.0370.263-0.1130.111-0.105

GO Enrichment output for subnetwork 1202 in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.89E-121.125E-08
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.868E-104.448E-07
interphaseGO:0051325GO:0051325 on GO4.981E-103.819E-07
positive regulation of cell migrationGO:0030335GO:0030335 on GO8.319E-104.783E-07
positive regulation of cell motionGO:0051272GO:0051272 on GO1.992E-099.162E-07
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO9.414E-093.609E-06
peptidyl-amino acid modificationGO:0018193GO:0018193 on GO1.39E-084.566E-06
response to hypoxiaGO:0001666GO:0001666 on GO1.974E-085.674E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.977E-085.053E-06
response to oxygen levelsGO:0070482GO:0070482 on GO2.523E-085.803E-06
positive regulation of cell cycleGO:0045787GO:0045787 on GO1.667E-073.486E-05


IPC file

NameAccession NumberLinkP-valCorrected P-val
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO3.672E-138.97E-10
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO4.693E-115.732E-08
response to hypoxiaGO:0001666GO:0001666 on GO1.388E-101.13E-07
positive regulation of cell migrationGO:0030335GO:0030335 on GO1.429E-108.726E-08
response to oxygen levelsGO:0070482GO:0070482 on GO1.777E-108.681E-08
positive regulation of cell motionGO:0051272GO:0051272 on GO4.123E-101.679E-07
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO2.536E-098.851E-07
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO3.541E-091.081E-06
positive regulation of cell cycleGO:0045787GO:0045787 on GO2.624E-087.124E-06
response to UVGO:0009411GO:0009411 on GO6.959E-081.7E-05
positive regulation of cyclin-dependent protein kinase activityGO:0045737GO:0045737 on GO1.192E-072.648E-05


Loi file

NameAccession NumberLinkP-valCorrected P-val
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO9.076E-132.184E-09
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO8.773E-111.055E-07
interphaseGO:0051325GO:0051325 on GO1.236E-109.909E-08
positive regulation of cell migrationGO:0030335GO:0030335 on GO2.722E-101.637E-07
response to hypoxiaGO:0001666GO:0001666 on GO3.366E-101.62E-07
response to oxygen levelsGO:0070482GO:0070482 on GO4.305E-101.726E-07
positive regulation of cell motionGO:0051272GO:0051272 on GO7.98E-102.743E-07
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO4.401E-091.324E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO7.245E-091.937E-06
positive regulation of cell cycleGO:0045787GO:0045787 on GO4.921E-081.184E-05
response to UVGO:0009411GO:0009411 on GO9.996E-082.186E-05


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.89E-121.125E-08
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.868E-104.448E-07
interphaseGO:0051325GO:0051325 on GO4.981E-103.819E-07
positive regulation of cell migrationGO:0030335GO:0030335 on GO8.319E-104.783E-07
positive regulation of cell motionGO:0051272GO:0051272 on GO1.992E-099.162E-07
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO9.414E-093.609E-06
peptidyl-amino acid modificationGO:0018193GO:0018193 on GO1.39E-084.566E-06
response to hypoxiaGO:0001666GO:0001666 on GO1.974E-085.674E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.977E-085.053E-06
response to oxygen levelsGO:0070482GO:0070482 on GO2.523E-085.803E-06
positive regulation of cell cycleGO:0045787GO:0045787 on GO1.667E-073.486E-05


Wang file

NameAccession NumberLinkP-valCorrected P-val
G1/S transition of mitotic cell cycleGO:0000082GO:0000082 on GO4.89E-121.125E-08
interphase of mitotic cell cycleGO:0051329GO:0051329 on GO3.868E-104.448E-07
interphaseGO:0051325GO:0051325 on GO4.981E-103.819E-07
positive regulation of cell migrationGO:0030335GO:0030335 on GO8.319E-104.783E-07
positive regulation of cell motionGO:0051272GO:0051272 on GO1.992E-099.162E-07
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO9.414E-093.609E-06
peptidyl-amino acid modificationGO:0018193GO:0018193 on GO1.39E-084.566E-06
response to hypoxiaGO:0001666GO:0001666 on GO1.974E-085.674E-06
regulation of cyclin-dependent protein kinase activityGO:0000079GO:0000079 on GO1.977E-085.053E-06
response to oxygen levelsGO:0070482GO:0070482 on GO2.523E-085.803E-06
positive regulation of cell cycleGO:0045787GO:0045787 on GO1.667E-073.486E-05


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