Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 836-9-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1232 | 1.465e-02 | 2.752e-02 | 5.797e-02 |
|---|
| IPC-NIBC-129 | 0.1704 | 9.125e-02 | 5.547e-02 | 3.738e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2249 | 5.529e-02 | 4.128e-02 | 4.454e-01 |
|---|
| Loi_GPL570 | 0.2246 | 1.070e-01 | 8.209e-02 | 4.112e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2084 | 7.044e-02 | 1.985e-02 | 6.644e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3164 | 8.285e-02 | 3.572e-02 | 4.230e-01 |
|---|
| Schmidt | 0.1942 | 2.000e-02 | 2.764e-02 | 1.124e-01 |
|---|
| Sotiriou | 0.2827 | 5.045e-02 | 3.594e-02 | 3.427e-01 |
|---|
| Zhang | 0.2703 | 8.103e-03 | 1.205e-02 | 3.394e-02 |
|---|
Expression data for subnetwork 836-9-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 836-9-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| rad51 |   | 2 | 35 | 136 | 126 | 0.037 | 0.173 | 0.127 | 0.233 | 0.126 | 0.303 | 0.166 | 0.147 | 0.109 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| birc5 | | 8 | 11 | 37 | 28 | 0.101 | 0.216 | 0.190 | 0.134 | 0.223 | 0.202 | 0.236 | 0.241 | 0.205 |
|---|
| casp3 | | 2 | 35 | 136 | 126 | -0.051 | 0.158 | 0.146 | 0.160 | 0.074 | 0.202 | 0.070 | 0.073 | 0.059 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 836-9-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 |  | 2.592E-06 | 5.962E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 3.188E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 2.183E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.48E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 2.067E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.772E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.55E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.928E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.785E-07 | 9.246E-04 |
|---|
| response to UV | GO:0009411 | | 5.734E-07 | 7.004E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 5.206E-04 |
|---|
| mitotic recombination | GO:0006312 | | 8.703E-07 | 5.315E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 8.703E-07 | 4.252E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.305E-06 | 5.314E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.305E-06 | 4.555E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 1.827E-06 | 5.579E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.827E-06 | 4.959E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 1.827E-06 | 4.463E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.436E-06 | 5.409E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 1.495E-03 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 1.011E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 8.414E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 7.291E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 5.832E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 7.289E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 6.248E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 2.544E-06 | 7.652E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 6.802E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 6.122E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 3.392E-06 | 7.419E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.785E-07 | 9.246E-04 |
|---|
| response to UV | GO:0009411 | | 5.734E-07 | 7.004E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 5.206E-04 |
|---|
| mitotic recombination | GO:0006312 | | 8.703E-07 | 5.315E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 8.703E-07 | 4.252E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.305E-06 | 5.314E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.305E-06 | 4.555E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 1.827E-06 | 5.579E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.827E-06 | 4.959E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 1.827E-06 | 4.463E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.436E-06 | 5.409E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 1.495E-03 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 1.011E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 8.414E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 7.291E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 5.832E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 7.289E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 6.248E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 2.544E-06 | 7.652E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 6.802E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 6.122E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 3.392E-06 | 7.419E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 1.495E-03 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 1.011E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 8.414E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 7.291E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 5.832E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 7.289E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 6.248E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 2.544E-06 | 7.652E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 6.802E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 6.122E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 3.392E-06 | 7.419E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 5.962E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 3.188E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 2.183E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.48E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 2.067E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.772E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.55E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.928E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 5.962E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 3.188E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 2.183E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.48E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 2.067E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.772E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.55E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.928E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 5.962E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 3.188E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.757E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 2.183E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.48E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 2.067E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.772E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.55E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.928E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
