Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 11168-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1482 | 2.745e-02 | 4.811e-02 | 1.020e-01 |
|---|
| IPC-NIBC-129 | 0.1880 | 6.575e-02 | 3.744e-02 | 2.709e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.1946 | 3.901e-02 | 2.726e-02 | 3.438e-01 |
|---|
| Loi_GPL570 | 0.2510 | 8.142e-02 | 5.699e-02 | 3.364e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1579 | 3.040e-02 | 2.173e-03 | 3.531e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3214 | 1.440e-01 | 7.634e-02 | 6.021e-01 |
|---|
| Schmidt | 0.2140 | 1.683e-02 | 2.340e-02 | 9.461e-02 |
|---|
| Sotiriou | 0.2936 | 1.176e-01 | 8.733e-02 | 6.138e-01 |
|---|
| Zhang | 0.2190 | 7.450e-03 | 1.108e-02 | 3.158e-02 |
|---|
Expression data for subnetwork 11168-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 11168-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| sp1 |   | 14 | 4 | 11 | 6 | 0.054 | 0.186 | 0.147 | 0.242 | 0.125 | 0.202 | 0.284 | 0.227 | 0.091 |
|---|
| psip1 | | 1 | 57 | 156 | 160 | 0.066 | 0.101 | -0.052 | 0.145 | 0.060 | -0.011 | 0.105 | 0.119 | 0.038 |
|---|
| rad51 | | 2 | 35 | 136 | 126 | 0.037 | 0.173 | 0.127 | 0.233 | 0.126 | 0.303 | 0.166 | 0.147 | 0.109 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| mybl2 | | 9 | 7 | 29 | 13 | 0.162 | 0.237 | 0.166 | 0.079 | 0.124 | 0.275 | 0.202 | 0.182 | 0.074 |
|---|
| casp3 | | 2 | 35 | 136 | 126 | -0.051 | 0.158 | 0.146 | 0.160 | 0.074 | 0.202 | 0.070 | 0.073 | 0.059 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 11168-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 |  | 1.574E-06 | 3.619E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 5.148E-03 |
|---|
| response to UV | GO:0009411 | | 4.787E-06 | 3.67E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 5.098E-06 | 2.931E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.553E-06 | 3.014E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 7.644E-06 | 2.93E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| meiosis | GO:0007126 | | 1.128E-05 | 2.882E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 1.185E-05 | 2.724E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.426E-05 | 2.981E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 4.07E-07 | 9.943E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 8.325E-07 | 1.017E-03 |
|---|
| response to UV | GO:0009411 | | 1.261E-06 | 1.027E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.405E-06 | 8.584E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.44E-06 | 7.034E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.44E-06 | 5.862E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.44E-06 | 5.024E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 2.159E-06 | 6.593E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 2.159E-06 | 5.86E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 2.159E-06 | 5.274E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.022E-06 | 6.711E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 4.84E-07 | 1.165E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 1.293E-03 |
|---|
| response to UV | GO:0009411 | | 1.453E-06 | 1.166E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.719E-06 | 1.034E-03 |
|---|
| mitotic recombination | GO:0006312 | | 1.719E-06 | 8.27E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.719E-06 | 6.892E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.814E-06 | 6.234E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 2.577E-06 | 7.752E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 2.577E-06 | 6.89E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 2.577E-06 | 6.201E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.607E-06 | 7.891E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 4.07E-07 | 9.943E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 8.325E-07 | 1.017E-03 |
|---|
| response to UV | GO:0009411 | | 1.261E-06 | 1.027E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.405E-06 | 8.584E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.44E-06 | 7.034E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.44E-06 | 5.862E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.44E-06 | 5.024E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 2.159E-06 | 6.593E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 2.159E-06 | 5.86E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 2.159E-06 | 5.274E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.022E-06 | 6.711E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 4.84E-07 | 1.165E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 1.293E-03 |
|---|
| response to UV | GO:0009411 | | 1.453E-06 | 1.166E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.719E-06 | 1.034E-03 |
|---|
| mitotic recombination | GO:0006312 | | 1.719E-06 | 8.27E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.719E-06 | 6.892E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.814E-06 | 6.234E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 2.577E-06 | 7.752E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 2.577E-06 | 6.89E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 2.577E-06 | 6.201E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.607E-06 | 7.891E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 4.84E-07 | 1.165E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 1.293E-03 |
|---|
| response to UV | GO:0009411 | | 1.453E-06 | 1.166E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.719E-06 | 1.034E-03 |
|---|
| mitotic recombination | GO:0006312 | | 1.719E-06 | 8.27E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.719E-06 | 6.892E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.814E-06 | 6.234E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 2.577E-06 | 7.752E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 2.577E-06 | 6.89E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 2.577E-06 | 6.201E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.607E-06 | 7.891E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 1.574E-06 | 3.619E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 5.148E-03 |
|---|
| response to UV | GO:0009411 | | 4.787E-06 | 3.67E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 5.098E-06 | 2.931E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.553E-06 | 3.014E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 7.644E-06 | 2.93E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| meiosis | GO:0007126 | | 1.128E-05 | 2.882E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 1.185E-05 | 2.724E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.426E-05 | 2.981E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 1.574E-06 | 3.619E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 5.148E-03 |
|---|
| response to UV | GO:0009411 | | 4.787E-06 | 3.67E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 5.098E-06 | 2.931E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.553E-06 | 3.014E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 7.644E-06 | 2.93E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| meiosis | GO:0007126 | | 1.128E-05 | 2.882E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 1.185E-05 | 2.724E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.426E-05 | 2.981E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 1.574E-06 | 3.619E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 5.148E-03 |
|---|
| response to UV | GO:0009411 | | 4.787E-06 | 3.67E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 5.098E-06 | 2.931E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.553E-06 | 3.014E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 7.644E-06 | 2.93E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 7.644E-06 | 2.512E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.075E-03 |
|---|
| meiosis | GO:0007126 | | 1.128E-05 | 2.882E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 1.185E-05 | 2.724E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.426E-05 | 2.981E-03 |
|---|
