Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 7057-8-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.2436	6.692e-03	1.864e-03	4.218e-02
IPC-NIBC-129	0.1456	1.703e-02	1.165e-02	8.049e-02
Ivshina_GPL96-GPL97	0.2659	9.220e-02	8.108e-02	6.218e-01
Loi_GPL570	0.3567	1.247e-01	1.534e-01	4.418e-01
Loi_GPL96-GPL97	0.1393	5.070e-04	8.300e-05	1.805e-03
Pawitan_GPL96-GPL97	0.3670	2.009e-01	1.330e-01	7.233e-01
Schmidt	0.1936	4.733e-03	5.229e-03	3.586e-02
Sotiriou	0.3742	1.674e-01	8.713e-02	7.360e-01
Wang	0.1398	1.330e-01	1.199e-01	3.687e-01
Zhang	0.1892	3.459e-03	1.557e-03	1.941e-02

Expression data for subnetwork 7057-8-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 7057-8-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
thbs1		1	90	51	61	0.127	0.110	0.029	0.160	0.056	0.053	0.003	0.026	0.108	0.003
pdgfb		1	90	51	61	0.186	-0.069	0.089	0.269	0.087	0.163	0.038	0.139	-0.163	0.037
cdc25c		2	53	51	49	-0.025	0.187	0.084	0.267	0.070	0.125	0.204	0.250	0.052	0.054
mapk14		2	53	22	31	-0.062	0.058	0.135	0.204	0.086	0.068	0.246	0.068	0.056	0.011
ccnd1		97	2	8	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.106	0.144
tsc1		31	5	26	15	0.049	0.012	-0.055	0.072	0.055	-0.196	0.006	0.010	0.043	-0.007
mars		2	53	22	31	0.114	0.207	0.114	0.083	0.198	0.340	0.139	0.180	0.050	0.129
cdc2		99	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.067	0.297
hras		5	20	51	36	0.049	-0.030	0.094	0.210	0.160	0.245	0.086	0.208	0.001	0.003
map2k1		3	39	51	42	0.154	0.096	0.093	0.013	0.095	0.207	0.082	0.096	-0.043	undef

GO Enrichment output for subnetwork 7057-8-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		1.727E-08	3.972E-05
regulation of focal adhesion formation	GO:0051893		6.034E-08	6.939E-05
positive regulation of endothelial cell migration	GO:0010595		9.647E-08	7.396E-05
regulation of blood vessel endothelial cell migration	GO:0043535		3.778E-07	2.172E-04
regulation of endothelial cell migration	GO:0010594		1.654E-06	7.61E-04
positive regulation of locomotion	GO:0040017		1.945E-06	7.455E-04
regulation of chemotaxis	GO:0050920		2.267E-06	7.449E-04
regulation of cell-matrix adhesion	GO:0001952		2.623E-06	7.541E-04
regulation of behavior	GO:0050795		2.623E-06	6.703E-04
regulation of blood coagulation	GO:0030193		2.623E-06	6.032E-04
regulation of endothelial cell proliferation	GO:0001936		3.441E-06	7.196E-04

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		2.702E-09	6.601E-06
positive regulation of endothelial cell migration	GO:0010595		1.511E-08	1.846E-05
regulation of focal adhesion formation	GO:0051893		1.511E-08	1.231E-05
regulation of blood vessel endothelial cell migration	GO:0043535		5.926E-08	3.62E-05
regulation of endothelial cell migration	GO:0010594		2.602E-07	1.271E-04
positive regulation of locomotion	GO:0040017		4.13E-07	1.682E-04
positive regulation of MAP kinase activity	GO:0043406		4.483E-07	1.564E-04
regulation of chemotaxis	GO:0050920		4.748E-07	1.45E-04
regulation of cell-matrix adhesion	GO:0001952		4.748E-07	1.289E-04
regulation of behavior	GO:0050795		6.16E-07	1.505E-04
regulation of blood coagulation	GO:0030193		6.961E-07	1.546E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		4.441E-09	1.069E-05
positive regulation of endothelial cell migration	GO:0010595		2.483E-08	2.987E-05
regulation of focal adhesion formation	GO:0051893		2.483E-08	1.992E-05
regulation of blood vessel endothelial cell migration	GO:0043535		9.735E-08	5.856E-05
regulation of endothelial cell migration	GO:0010594		4.272E-07	2.056E-04
positive regulation of locomotion	GO:0040017		5.858E-07	2.349E-04
regulation of chemotaxis	GO:0050920		6.779E-07	2.33E-04
regulation of cell-matrix adhesion	GO:0001952		7.792E-07	2.343E-04
positive regulation of MAP kinase activity	GO:0043406		8.634E-07	2.308E-04
regulation of behavior	GO:0050795		8.9E-07	2.141E-04
regulation of blood coagulation	GO:0030193		1.011E-06	2.211E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		2.702E-09	6.601E-06
positive regulation of endothelial cell migration	GO:0010595		1.511E-08	1.846E-05
regulation of focal adhesion formation	GO:0051893		1.511E-08	1.231E-05
regulation of blood vessel endothelial cell migration	GO:0043535		5.926E-08	3.62E-05
regulation of endothelial cell migration	GO:0010594		2.602E-07	1.271E-04
positive regulation of locomotion	GO:0040017		4.13E-07	1.682E-04
positive regulation of MAP kinase activity	GO:0043406		4.483E-07	1.564E-04
regulation of chemotaxis	GO:0050920		4.748E-07	1.45E-04
regulation of cell-matrix adhesion	GO:0001952		4.748E-07	1.289E-04
regulation of behavior	GO:0050795		6.16E-07	1.505E-04
regulation of blood coagulation	GO:0030193		6.961E-07	1.546E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		4.441E-09	1.069E-05
positive regulation of endothelial cell migration	GO:0010595		2.483E-08	2.987E-05
regulation of focal adhesion formation	GO:0051893		2.483E-08	1.992E-05
regulation of blood vessel endothelial cell migration	GO:0043535		9.735E-08	5.856E-05
regulation of endothelial cell migration	GO:0010594		4.272E-07	2.056E-04
positive regulation of locomotion	GO:0040017		5.858E-07	2.349E-04
regulation of chemotaxis	GO:0050920		6.779E-07	2.33E-04
regulation of cell-matrix adhesion	GO:0001952		7.792E-07	2.343E-04
positive regulation of MAP kinase activity	GO:0043406		8.634E-07	2.308E-04
regulation of behavior	GO:0050795		8.9E-07	2.141E-04
regulation of blood coagulation	GO:0030193		1.011E-06	2.211E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		4.441E-09	1.069E-05
positive regulation of endothelial cell migration	GO:0010595		2.483E-08	2.987E-05
regulation of focal adhesion formation	GO:0051893		2.483E-08	1.992E-05
regulation of blood vessel endothelial cell migration	GO:0043535		9.735E-08	5.856E-05
regulation of endothelial cell migration	GO:0010594		4.272E-07	2.056E-04
positive regulation of locomotion	GO:0040017		5.858E-07	2.349E-04
regulation of chemotaxis	GO:0050920		6.779E-07	2.33E-04
regulation of cell-matrix adhesion	GO:0001952		7.792E-07	2.343E-04
positive regulation of MAP kinase activity	GO:0043406		8.634E-07	2.308E-04
regulation of behavior	GO:0050795		8.9E-07	2.141E-04
regulation of blood coagulation	GO:0030193		1.011E-06	2.211E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		1.727E-08	3.972E-05
regulation of focal adhesion formation	GO:0051893		6.034E-08	6.939E-05
positive regulation of endothelial cell migration	GO:0010595		9.647E-08	7.396E-05
regulation of blood vessel endothelial cell migration	GO:0043535		3.778E-07	2.172E-04
regulation of endothelial cell migration	GO:0010594		1.654E-06	7.61E-04
positive regulation of locomotion	GO:0040017		1.945E-06	7.455E-04
regulation of chemotaxis	GO:0050920		2.267E-06	7.449E-04
regulation of cell-matrix adhesion	GO:0001952		2.623E-06	7.541E-04
regulation of behavior	GO:0050795		2.623E-06	6.703E-04
regulation of blood coagulation	GO:0030193		2.623E-06	6.032E-04
regulation of endothelial cell proliferation	GO:0001936		3.441E-06	7.196E-04

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		1.727E-08	3.972E-05
regulation of focal adhesion formation	GO:0051893		6.034E-08	6.939E-05
positive regulation of endothelial cell migration	GO:0010595		9.647E-08	7.396E-05
regulation of blood vessel endothelial cell migration	GO:0043535		3.778E-07	2.172E-04
regulation of endothelial cell migration	GO:0010594		1.654E-06	7.61E-04
positive regulation of locomotion	GO:0040017		1.945E-06	7.455E-04
regulation of chemotaxis	GO:0050920		2.267E-06	7.449E-04
regulation of cell-matrix adhesion	GO:0001952		2.623E-06	7.541E-04
regulation of behavior	GO:0050795		2.623E-06	6.703E-04
regulation of blood coagulation	GO:0030193		2.623E-06	6.032E-04
regulation of endothelial cell proliferation	GO:0001936		3.441E-06	7.196E-04

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		1.727E-08	3.972E-05
regulation of focal adhesion formation	GO:0051893		6.034E-08	6.939E-05
positive regulation of endothelial cell migration	GO:0010595		9.647E-08	7.396E-05
regulation of blood vessel endothelial cell migration	GO:0043535		3.778E-07	2.172E-04
regulation of endothelial cell migration	GO:0010594		1.654E-06	7.61E-04
positive regulation of locomotion	GO:0040017		1.945E-06	7.455E-04
regulation of chemotaxis	GO:0050920		2.267E-06	7.449E-04
regulation of cell-matrix adhesion	GO:0001952		2.623E-06	7.541E-04
regulation of behavior	GO:0050795		2.623E-06	6.703E-04
regulation of blood coagulation	GO:0030193		2.623E-06	6.032E-04
regulation of endothelial cell proliferation	GO:0001936		3.441E-06	7.196E-04

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
positive regulation of blood vessel endothelial cell migration	GO:0043536		1.727E-08	3.972E-05
regulation of focal adhesion formation	GO:0051893		6.034E-08	6.939E-05
positive regulation of endothelial cell migration	GO:0010595		9.647E-08	7.396E-05
regulation of blood vessel endothelial cell migration	GO:0043535		3.778E-07	2.172E-04
regulation of endothelial cell migration	GO:0010594		1.654E-06	7.61E-04
positive regulation of locomotion	GO:0040017		1.945E-06	7.455E-04
regulation of chemotaxis	GO:0050920		2.267E-06	7.449E-04
regulation of cell-matrix adhesion	GO:0001952		2.623E-06	7.541E-04
regulation of behavior	GO:0050795		2.623E-06	6.703E-04
regulation of blood coagulation	GO:0030193		2.623E-06	6.032E-04
regulation of endothelial cell proliferation	GO:0001936		3.441E-06	7.196E-04