#run-b1 #Genes kept after intersection from : #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/subnets-kept/subnets-kept_th1-pval-1e-01-08.txt #Threshold file used : #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/threshold/th1-pval-1e-01.tab #Number of experiments to keep a subnet : #08 #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/subnets-kept/subnets-kept_th2-pval-1e-02-02.txt #Threshold file used : #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/threshold/th2-pval-1e-02.tab #Number of experiments to keep a subnet : #02 #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/subnets-kept/subnets-kept_th3-pval-1e-01-01.txt #Threshold file used : #/home/data/iti/output/run-b1/out-0.05-06-0.01-300-run-b1/threshold/th3-pval-1e-01.tab #Number of experiments to keep a subnet : #01 CDC2 99 CCND1 97 PCNA 39 CCNB1 33 TSC1 31 SP1 31 TOP2A 22 STMN2 19 CDKN3 18 CALM1 16 HDAC2 16 EIF2S1 13 KRT18 13 HMMR 10 FEN1 7 HIF1A 7 HUS1 6 PGK1 6 GRB2 6 HRAS 5 RACGAP1 5 RRM2 5 BRCA1 5 PCP4 5 CTTN 5 MYBL2 5 PIN1 4 BYSL 4 SFN 4 MCM2 4 RANBP9 4 PKMYT1 4 PTTG1 4 TROAP 4 RAN 4 CKS2 4 CCNB2 4 CDC25A 4 POLD2 3 XPO1 3 SRPK1 3 E2F3 3 RCC1 3 BAX 3 BIRC5 3 DYNC1I1 3 MAP2K1 3 CDK2 3 PSMD2 3 FADD 3 POLE 3 NACA 3 YBX1 2 TXN 2 PSMA6 2 CFL1 2 HSPB1 2 TK1 2 RALA 2 MAPK14 2 CYCS 2 TPX2 2 FKBP3 2 GAPDH 2 DYNLL1 2 VEGFA 2 ORC6L 2 RGS4 2 CCNA2 2 TXNRD1 2 PSMA7 2 CDC25C 2 PSMD10 2 GSK3B 2 MCM6 2 HNRNPA1 2 DAPK1 2 STAMBP 2 SMAD6 2 SEMA3F 2 MARS 2 RPA3 2 POLD1 2 GLRX2 2 RBX1 2 RPS6KB1 2 MSH6 2 YWHAZ 2 HSPH1 2 BOP1 1 RIT2 1 AURKB 1 YY1 1 PRKCI 1 TM7SF2 1 MAP4 1 STRN3 1 CKS1B 1 CEBPZ 1 DGCR8 1 SMARCB1 1 NDUFA4L2 1 COPB2 1 DYNLT1 1 SKP2 1 CEP55 1 VDAC1 1 CSE1L 1 PSMD1 1 RHOD 1 GAP43 1 ACTN1 1 ACOX1 1 GIT1 1 MNAT1 1 CLSPN 1 HBXIP 1 CDS1 1 FTSJ3 1 DCTN2 1 MORF4L2 1 XPOT 1 P4HA2 1 RAD1 1 TCERG1 1 SLC19A1 1 ZWINT 1 SLC4A1AP 1 NMD3 1 TUBB3 1 TRPV4 1 UBB 1 TOPBP1 1 U2AF2 1 HMGA1 1 RAD51 1 WDR26 1 THBS1 1 KCNN2 1 SF3A2 1 MAF1 1 SUPT16H 1 PPFIA1 1 SPAG5 1 PLK4 1 RBBP7 1 WDR46 1 OIP5 1 SIX2 1 ARD1A 1 STRN 1 PDGFB 1 TUBG1 1 BAT2 1 CCNE2 1 SNRPD1 1 KCTD13 1 PSMD8 1 CS 1 DHX30 1 RFC3 1 LZTS1 1 EPN1 1 DYNLRB1 1 PBK 1 RFC5 1 BRAF 1 EGLN1 1 KCNK15 1 EIF4EBP1 1 CDC6 1 BCAS1 1 CDK7 1 COL7A1 1 LIG1 1 NOP56 1 MAPK1 1 SPP1 1 HSPA8 1 BARD1 1 COL1A1 1 MCM4 1 RAP1B 1 CTSL1 1 UNG 1 THOC7 1 IGFBP5 1 ENO2 1 NEK2 1 NXT1 1 POU5F1 1 HMGB2 1 AGTPBP1 1 POLD4 1 SFRS3 1 KARS 1 STMN1 1 RPS6KA3 1 PNO1 1 TRADD 1 TRIM37 1 SLC25A4 1 UBE2C 1 SIX1 1 NDRG1 1 NCKIPSD 1 CCNK 1 RNASEN 1 CCNE1 1 CRMP1 1 PES1 1 FANCG 1 ORC4L 1 CASP3 1 HSP90AA1 1 FOXM1 1 LGALS1 1 PA2G4 1 PRKDC 1 ECT2 1 GRB7 1 PRIM2 1 KIF23 1 POLE2 1 DSN1 1 DHX9 1 MCM7 1 EDF1 1 E2F2 1 PRC1 1 NOL3 1 AFG3L2 1 GTF2H4 1 CDCA8 1 HOXC4 1 MTFR1 1