Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 7013-8-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1873 | 1.267e-02 | 1.517e-02 | 1.181e-01 |
|---|
| IPC-NIBC-129 | 0.2569 | 3.867e-02 | 4.840e-02 | 3.789e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2368 | 5.434e-03 | 8.894e-03 | 1.799e-01 |
|---|
| Loi_GPL570 | 0.2714 | 5.591e-02 | 5.551e-02 | 2.766e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1530 | 2.000e-06 | 1.500e-05 | 6.000e-06 |
|---|
| Parker_GPL1390 | 0.2769 | 1.172e-01 | 1.184e-01 | 5.827e-01 |
|---|
| Parker_GPL887 | 0.1539 | 4.740e-01 | 5.082e-01 | 5.056e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3678 | 8.354e-02 | 5.936e-02 | 4.633e-01 |
|---|
| Schmidt | 0.2625 | 5.293e-03 | 7.768e-03 | 7.878e-02 |
|---|
| Sotiriou | 0.3538 | 2.127e-03 | 5.900e-04 | 5.543e-02 |
|---|
| Wang | 0.1798 | 1.239e-01 | 8.832e-02 | 4.193e-01 |
|---|
| Zhang | 0.2886 | 1.050e-01 | 6.941e-02 | 2.508e-01 |
|---|
| Zhou | 0.4226 | 5.691e-02 | 5.976e-02 | 3.556e-01 |
|---|
Expression data for subnetwork 7013-8-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 7013-8-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
|---|
| stmn2 |   | 29 | 8 | 1 | 3 | 0.057 | 0.106 | 0.005 | 0.052 | 0.110 | 0.071 | -0.099 | 0.006 | 0.034 | 0.103 | 0.075 | 0.113 | -0.039 |
|---|
| cttn | | 9 | 27 | 44 | 37 | 0.067 | 0.065 | 0.123 | 0.238 | 0.126 | 0.263 | -0.172 | 0.216 | 0.069 | 0.115 | 0.129 | 0.025 | 0.279 |
|---|
| cdkn1a | | 70 | 3 | 73 | 51 | 0.115 | -0.020 | 0.065 | 0.082 | 0.099 | 0.124 | 0.055 | 0.087 | 0.068 | 0.144 | 0.015 | -0.201 | 0.069 |
|---|
| tle1 | | 23 | 9 | 78 | 60 | 0.062 | 0.235 | -0.032 | -0.177 | 0.033 | 0.085 | 0.339 | 0.068 | 0.126 | -0.027 | -0.028 | 0.068 | 0.025 |
|---|
| plcg1 | | 1 | 164 | 78 | 99 | -0.042 | 0.072 | -0.038 | 0.170 | 0.068 | 0.266 | 0.112 | 0.005 | 0.061 | 0.162 | -0.003 | 0.033 | 0.005 |
|---|
| ccnb1 | | 36 | 7 | 78 | 59 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.099 | 0.126 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 | 0.398 |
|---|
| ccnd1 | | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
|---|
| cdc2 | | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
|---|
| mapre1 | | 1 | 164 | 78 | 99 | 0.025 | 0.160 | 0.120 | 0.289 | 0.089 | 0.003 | 0.023 | 0.320 | 0.149 | 0.107 | 0.152 | -0.080 | 0.170 |
|---|
| git1 | | 5 | 50 | 78 | 70 | 0.082 | -0.027 | 0.097 | 0.051 | 0.077 | 0.074 | -0.099 | 0.138 | 0.087 | 0.097 | -0.065 | -0.065 | 0.114 |
|---|
| pfn1 | | 2 | 104 | 78 | 83 | 0.107 | 0.097 | 0.121 | -0.002 | 0.068 | 0.134 | 0.079 | 0.183 | -0.002 | -0.018 | -0.009 | -0.082 | 0.256 |
|---|
| terf1 | | 1 | 164 | 78 | 99 | 0.032 | -0.046 | -0.031 | 0.156 | 0.091 | 0.038 | 0.325 | -0.156 | -0.036 | 0.142 | 0.173 | 0.160 | 0.170 |
|---|
| six1 | | 3 | 79 | 78 | 79 | 0.097 | 0.114 | 0.095 | 0.149 | 0.151 | -0.015 | -0.006 | 0.123 | 0.113 | 0.184 | 0.124 | 0.191 | 0.079 |
|---|
| mst1r | | 1 | 164 | 78 | 99 | -0.069 | 0.101 | 0.052 | -0.112 | 0.050 | 0.025 | 0.005 | 0.065 | 0.073 | -0.041 | 0.009 | 0.267 | 0.308 |
|---|
| cks2 | | 44 | 6 | 73 | 54 | 0.050 | 0.233 | 0.170 | 0.103 | 0.186 | 0.172 | 0.093 | 0.167 | 0.263 | 0.151 | 0.145 | 0.284 | 0.383 |
|---|
| acta1 | | 6 | 43 | 44 | 40 | -0.003 | 0.098 | -0.008 | -0.030 | 0.119 | 0.174 | 0.376 | 0.024 | 0.182 | 0.214 | -0.013 | 0.048 | 0.201 |
|---|
| grb2 | | 9 | 27 | 1 | 4 | 0.084 | -0.013 | 0.086 | -0.031 | 0.162 | -0.038 | 0.003 | 0.065 | 0.158 | 0.127 | -0.097 | 0.194 | -0.005 |
|---|
GO Enrichment output for subnetwork 7013-8-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 1.073E-06 | 2.468E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 4.289E-06 | 4.933E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.787E-06 | 6.736E-03 |
|---|
| interphase | GO:0051325 | | 9.628E-06 | 5.536E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.291E-05 | 0.01053646 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.433E-05 | 0.01315802 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.891E-05 | 0.01278403 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 3.891E-05 | 0.01118603 |
|---|
| response to UV | GO:0009411 | | 4.771E-05 | 0.0121928 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.801E-05 | 0.0110422 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.801E-05 | 0.01003837 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.81E-07 | 4.422E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.364E-06 | 1.666E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.614E-06 | 1.315E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 7.349E-06 | 4.489E-03 |
|---|
| muscle cell migration | GO:0014812 | | 7.349E-06 | 3.591E-03 |
|---|
| regulation of telomerase activity | GO:0051972 | | 7.349E-06 | 2.992E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 8.889E-06 | 3.102E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.446E-05 | 4.415E-03 |
|---|
| response to UV | GO:0009411 | | 1.528E-05 | 4.148E-03 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 1.542E-05 | 3.766E-03 |
|---|
| skeletal muscle fiber development | GO:0048741 | | 1.614E-05 | 3.584E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.491E-07 | 8.4E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.236E-06 | 2.69E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.738E-06 | 2.196E-03 |
|---|
| interphase | GO:0051325 | | 3.1E-06 | 1.865E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.023E-05 | 4.925E-03 |
|---|
| muscle cell migration | GO:0014812 | | 1.023E-05 | 4.104E-03 |
|---|
| regulation of telomerase activity | GO:0051972 | | 1.023E-05 | 3.518E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.455E-05 | 4.375E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.989E-05 | 5.316E-03 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 2.146E-05 | 5.164E-03 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 2.146E-05 | 4.695E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.81E-07 | 4.422E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.364E-06 | 1.666E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.614E-06 | 1.315E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 7.349E-06 | 4.489E-03 |
|---|
| muscle cell migration | GO:0014812 | | 7.349E-06 | 3.591E-03 |
|---|
| regulation of telomerase activity | GO:0051972 | | 7.349E-06 | 2.992E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 8.889E-06 | 3.102E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.446E-05 | 4.415E-03 |
|---|
| response to UV | GO:0009411 | | 1.528E-05 | 4.148E-03 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 1.542E-05 | 3.766E-03 |
|---|
| skeletal muscle fiber development | GO:0048741 | | 1.614E-05 | 3.584E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.491E-07 | 8.4E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.236E-06 | 2.69E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.738E-06 | 2.196E-03 |
|---|
| interphase | GO:0051325 | | 3.1E-06 | 1.865E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.023E-05 | 4.925E-03 |
|---|
| muscle cell migration | GO:0014812 | | 1.023E-05 | 4.104E-03 |
|---|
| regulation of telomerase activity | GO:0051972 | | 1.023E-05 | 3.518E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.455E-05 | 4.375E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.989E-05 | 5.316E-03 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 2.146E-05 | 5.164E-03 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 2.146E-05 | 4.695E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 3.982E-10 | 1.422E-06 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 7.119E-08 | 1.271E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.703E-07 | 3.218E-04 |
|---|
| protein kinase regulator activity | GO:0019887 | | 7.384E-07 | 6.592E-04 |
|---|
| actin filament bundle | GO:0032432 | | 8.589E-07 | 6.135E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 8.589E-07 | 5.112E-04 |
|---|
| actomyosin | GO:0042641 | | 1.437E-06 | 7.33E-04 |
|---|
| kinase regulator activity | GO:0019207 | | 1.558E-06 | 6.956E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.007E-06 | 7.963E-04 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.25E-05 | 4.465E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.757E-05 | 5.704E-03 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 9.416E-10 | 3.435E-06 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 5.82E-08 | 1.062E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.292E-07 | 2.787E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 5.788E-07 | 5.279E-04 |
|---|
| protein kinase regulator activity | GO:0019887 | | 6.543E-07 | 4.774E-04 |
|---|
| kinase regulator activity | GO:0019207 | | 1.157E-06 | 7.033E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.495E-06 | 7.791E-04 |
|---|
| interphase | GO:0051325 | | 1.649E-06 | 7.519E-04 |
|---|
| spindle | GO:0005819 | | 2.492E-06 | 1.01E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 6.11E-06 | 2.229E-03 |
|---|
| skeletal muscle fiber development | GO:0048741 | | 7.917E-06 | 2.626E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.491E-07 | 8.4E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.236E-06 | 2.69E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.738E-06 | 2.196E-03 |
|---|
| interphase | GO:0051325 | | 3.1E-06 | 1.865E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.023E-05 | 4.925E-03 |
|---|
| muscle cell migration | GO:0014812 | | 1.023E-05 | 4.104E-03 |
|---|
| regulation of telomerase activity | GO:0051972 | | 1.023E-05 | 3.518E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.455E-05 | 4.375E-03 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 1.989E-05 | 5.316E-03 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 2.146E-05 | 5.164E-03 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 2.146E-05 | 4.695E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.073E-06 | 2.468E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 4.289E-06 | 4.933E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.787E-06 | 6.736E-03 |
|---|
| interphase | GO:0051325 | | 9.628E-06 | 5.536E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.291E-05 | 0.01053646 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.433E-05 | 0.01315802 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.891E-05 | 0.01278403 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 3.891E-05 | 0.01118603 |
|---|
| response to UV | GO:0009411 | | 4.771E-05 | 0.0121928 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.801E-05 | 0.0110422 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.801E-05 | 0.01003837 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.073E-06 | 2.468E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 4.289E-06 | 4.933E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.787E-06 | 6.736E-03 |
|---|
| interphase | GO:0051325 | | 9.628E-06 | 5.536E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.291E-05 | 0.01053646 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.433E-05 | 0.01315802 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.891E-05 | 0.01278403 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 3.891E-05 | 0.01118603 |
|---|
| response to UV | GO:0009411 | | 4.771E-05 | 0.0121928 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.801E-05 | 0.0110422 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.801E-05 | 0.01003837 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.073E-06 | 2.468E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 4.289E-06 | 4.933E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.787E-06 | 6.736E-03 |
|---|
| interphase | GO:0051325 | | 9.628E-06 | 5.536E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.291E-05 | 0.01053646 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.433E-05 | 0.01315802 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.891E-05 | 0.01278403 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 3.891E-05 | 0.01118603 |
|---|
| response to UV | GO:0009411 | | 4.771E-05 | 0.0121928 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.801E-05 | 0.0110422 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.801E-05 | 0.01003837 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.073E-06 | 2.468E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 4.289E-06 | 4.933E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.787E-06 | 6.736E-03 |
|---|
| interphase | GO:0051325 | | 9.628E-06 | 5.536E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.291E-05 | 0.01053646 |
|---|
| regulation of microtubule polymerization | GO:0031113 | | 3.433E-05 | 0.01315802 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.891E-05 | 0.01278403 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 3.891E-05 | 0.01118603 |
|---|
| response to UV | GO:0009411 | | 4.771E-05 | 0.0121928 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.801E-05 | 0.0110422 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.801E-05 | 0.01003837 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.016E-06 | 2.411E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 3.642E-06 | 4.322E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 7.463E-06 | 5.903E-03 |
|---|
| interphase | GO:0051325 | | 8.169E-06 | 4.847E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.047E-05 | 9.717E-03 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.546E-05 | 0.01402545 |
|---|
| epithelial tube morphogenesis | GO:0060562 | | 4.057E-05 | 0.01375217 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.292E-05 | 0.01273083 |
|---|
| negative regulation of telomere maintenance | GO:0032205 | | 4.292E-05 | 0.01131629 |
|---|
| response to UV | GO:0009411 | | 4.329E-05 | 0.0102728 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 5.717E-05 | 0.01233387 |
|---|
