Study run-a1
Study informations
119 subnetworks in total page | file
406 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5329-6-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1447 | 9.343e-03 | 1.116e-02 | 9.416e-02 |
|---|
| IPC-NIBC-129 | 0.2511 | 6.108e-02 | 7.868e-02 | 5.139e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2516 | 3.124e-02 | 4.290e-02 | 4.868e-01 |
|---|
| Loi_GPL570 | 0.1892 | 6.052e-02 | 6.010e-02 | 2.929e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1541 | 1.000e-06 | 5.000e-06 | 1.000e-06 |
|---|
| Parker_GPL1390 | 0.2437 | 2.090e-01 | 2.203e-01 | 7.421e-01 |
|---|
| Parker_GPL887 | 0.1188 | 5.835e-01 | 6.146e-01 | 6.296e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3359 | 7.335e-02 | 5.103e-02 | 4.255e-01 |
|---|
| Schmidt | 0.2807 | 9.913e-03 | 1.417e-02 | 1.299e-01 |
|---|
| Sotiriou | 0.3157 | 3.631e-03 | 1.159e-03 | 8.138e-02 |
|---|
| Wang | 0.1944 | 1.217e-01 | 8.649e-02 | 4.146e-01 |
|---|
| Zhang | 0.3011 | 8.509e-02 | 5.399e-02 | 2.080e-01 |
|---|
| Zhou | 0.3904 | 7.711e-02 | 8.329e-02 | 4.564e-01 |
|---|
Expression data for subnetwork 5329-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Parker_GPL1390 |
Parker_GPL887 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Zhou |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 5329-6-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Parker_GPL1390 | Parker_GPL887 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang | Zhou |
|---|
| pcna |   | 6 | 43 | 203 | 180 | 0.096 | 0.202 | 0.109 | 0.180 | 0.118 | 0.119 | 0.104 | 0.256 | 0.151 | 0.059 | 0.162 | 0.123 | 0.233 |
|---|
| cttn | | 9 | 27 | 44 | 37 | 0.067 | 0.065 | 0.123 | 0.238 | 0.126 | 0.263 | -0.172 | 0.216 | 0.069 | 0.115 | 0.129 | 0.025 | 0.279 |
|---|
| pfn2 | | 1 | 164 | 292 | 297 | -0.026 | 0.158 | 0.017 | 0.008 | 0.084 | 0.176 | 0.010 | 0.105 | 0.124 | 0.102 | 0.054 | 0.029 | 0.176 |
|---|
| evpl | | 1 | 164 | 292 | 297 | -0.053 | 0.079 | 0.064 | -0.126 | 0.090 | 0.131 | 0.443 | 0.176 | 0.192 | 0.157 | -0.046 | 0.046 | 0.118 |
|---|
| ccnd1 | | 102 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | -0.002 | -0.190 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 | 0.290 |
|---|
| cdc2 | | 103 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.153 | -0.131 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 | 0.336 |
|---|
| fen1 | | 3 | 79 | 292 | 272 | 0.045 | 0.194 | 0.169 | 0.196 | 0.136 | 0.252 | 0.033 | 0.332 | 0.221 | 0.144 | 0.106 | 0.056 | 0.114 |
|---|
| msh6 | | 1 | 164 | 292 | 297 | 0.123 | 0.241 | 0.000 | -0.042 | 0.108 | 0.244 | -0.190 | 0.202 | 0.171 | 0.178 | 0.073 | 0.095 | 0.307 |
|---|
| grb7 | | 1 | 164 | 292 | 297 | 0.056 | 0.082 | 0.167 | 0.110 | 0.122 | -0.064 | -0.106 | 0.201 | 0.097 | 0.074 | -0.038 | 0.006 | -0.110 |
|---|
| reps2 | | 1 | 164 | 292 | 297 | -0.033 | -0.139 | 0.057 | 0.122 | 0.113 | -0.154 | 0.105 | -0.157 | 0.079 | 0.124 | 0.066 | 0.303 | 0.220 |
|---|
| fhod1 | | 3 | 79 | 88 | 86 | 0.050 | 0.216 | 0.126 | -0.110 | 0.073 | 0.134 | -0.082 | 0.094 | -0.080 | -0.013 | 0.046 | 0.075 | 0.207 |
|---|
| cks2 | | 44 | 6 | 73 | 54 | 0.050 | 0.233 | 0.170 | 0.103 | 0.186 | 0.172 | 0.093 | 0.167 | 0.263 | 0.151 | 0.145 | 0.284 | 0.383 |
|---|
| nckipsd | | 3 | 79 | 44 | 44 | 0.094 | 0.086 | 0.221 | -0.049 | 0.109 | -0.007 | 0.119 | 0.121 | 0.006 | 0.126 | 0.073 | 0.054 | 0.339 |
|---|
| stambp | | 1 | 164 | 292 | 297 | 0.038 | 0.150 | 0.160 | 0.131 | 0.100 | -0.012 | 0.307 | 0.223 | 0.284 | 0.065 | 0.076 | 0.050 | 0.161 |
|---|
| acta1 | | 6 | 43 | 44 | 40 | -0.003 | 0.098 | -0.008 | -0.030 | 0.119 | 0.174 | 0.376 | 0.024 | 0.182 | 0.214 | -0.013 | 0.048 | 0.201 |
|---|
| plaur | | 1 | 164 | 292 | 297 | 0.109 | 0.269 | 0.011 | -0.079 | 0.075 | 0.229 | 0.252 | 0.233 | -0.003 | -0.001 | 0.038 | 0.019 | 0.219 |
|---|
| grb2 | | 9 | 27 | 1 | 4 | 0.084 | -0.013 | 0.086 | -0.031 | 0.162 | -0.038 | 0.003 | 0.065 | 0.158 | 0.127 | -0.097 | 0.194 | -0.005 |
|---|
GO Enrichment output for subnetwork 5329-6-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 |  | 8.9E-08 | 2.047E-04 |
|---|
| response to UV | GO:0009411 | | 9.495E-07 | 1.092E-03 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.265E-06 | 1.737E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 5.494E-06 | 3.159E-03 |
|---|
| response to light stimulus | GO:0009416 | | 1.825E-05 | 8.396E-03 |
|---|
| meiosis I | GO:0007127 | | 1.971E-05 | 7.555E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.649E-05 | 8.703E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.649E-05 | 7.615E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.649E-05 | 6.769E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.969E-05 | 9.129E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.969E-05 | 8.299E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.586E-08 | 3.873E-05 |
|---|
| response to UV | GO:0009411 | | 2.592E-07 | 3.166E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 4.855E-07 | 3.953E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 9.108E-07 | 5.563E-04 |
|---|
| meiosis I | GO:0007127 | | 7.206E-06 | 3.521E-03 |
|---|
| positive regulation of helicase activity | GO:0051096 | | 9.402E-06 | 3.828E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 9.402E-06 | 3.281E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 1.409E-05 | 4.304E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 1.972E-05 | 5.353E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 1.972E-05 | 4.818E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 1.972E-05 | 4.38E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 2.631E-08 | 6.33E-05 |
|---|
| response to UV | GO:0009411 | | 4.297E-07 | 5.169E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 7.968E-07 | 6.39E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.751E-06 | 1.053E-03 |
|---|
| meiosis I | GO:0007127 | | 1.087E-05 | 5.232E-03 |
|---|
| positive regulation of helicase activity | GO:0051096 | | 1.309E-05 | 5.25E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.309E-05 | 4.5E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 1.962E-05 | 5.902E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 1.962E-05 | 5.246E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 2.745E-05 | 6.605E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 2.745E-05 | 6.004E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.586E-08 | 3.873E-05 |
|---|
| response to UV | GO:0009411 | | 2.592E-07 | 3.166E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 4.855E-07 | 3.953E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 9.108E-07 | 5.563E-04 |
|---|
| meiosis I | GO:0007127 | | 7.206E-06 | 3.521E-03 |
|---|
| positive regulation of helicase activity | GO:0051096 | | 9.402E-06 | 3.828E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 9.402E-06 | 3.281E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 1.409E-05 | 4.304E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 1.972E-05 | 5.353E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 1.972E-05 | 4.818E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 1.972E-05 | 4.38E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 2.631E-08 | 6.33E-05 |
|---|
| response to UV | GO:0009411 | | 4.297E-07 | 5.169E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 7.968E-07 | 6.39E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.751E-06 | 1.053E-03 |
|---|
| meiosis I | GO:0007127 | | 1.087E-05 | 5.232E-03 |
|---|
| positive regulation of helicase activity | GO:0051096 | | 1.309E-05 | 5.25E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.309E-05 | 4.5E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 1.962E-05 | 5.902E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 1.962E-05 | 5.246E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 2.745E-05 | 6.605E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 2.745E-05 | 6.004E-03 |
|---|
Parker_GPL1390 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| MutLalpha complex binding | GO:0032405 | | 1.274E-08 | 4.549E-05 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.511E-08 | 2.698E-05 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 7.119E-08 | 8.474E-05 |
|---|
| mismatch repair complex binding | GO:0032404 | | 1.523E-07 | 1.36E-04 |
|---|
| ADP binding | GO:0043531 | | 2.093E-07 | 1.495E-04 |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 2.093E-07 | 1.246E-04 |
|---|
| response to UV | GO:0009411 | | 2.489E-07 | 1.27E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.402E-06 | 6.256E-04 |
|---|
| protein binding. bridging | GO:0030674 | | 1.91E-06 | 7.58E-04 |
|---|
| meiosis I | GO:0007127 | | 5.621E-06 | 2.007E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.25E-05 | 4.059E-03 |
|---|
Parker_GPL887 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.117E-08 | 4.075E-05 |
|---|
| MutLalpha complex binding | GO:0032405 | | 1.769E-08 | 3.227E-05 |
|---|
| cyclin-dependent protein kinase holoenzyme complex | GO:0000307 | | 4.948E-08 | 6.017E-05 |
|---|
| mismatch repair complex binding | GO:0032404 | | 4.948E-08 | 4.513E-05 |
|---|
| response to UV | GO:0009411 | | 1.1E-07 | 8.023E-05 |
|---|
| ADP binding | GO:0043531 | | 2.519E-07 | 1.531E-04 |
|---|
| cyclin-dependent protein kinase regulator activity | GO:0016538 | | 3.204E-07 | 1.67E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 8.336E-07 | 3.801E-04 |
|---|
| protein binding. bridging | GO:0030674 | | 1.457E-06 | 5.904E-04 |
|---|
| response to light stimulus | GO:0009416 | | 2.794E-06 | 1.019E-03 |
|---|
| meiosis I | GO:0007127 | | 4.316E-06 | 1.431E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 2.631E-08 | 6.33E-05 |
|---|
| response to UV | GO:0009411 | | 4.297E-07 | 5.169E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 7.968E-07 | 6.39E-04 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.751E-06 | 1.053E-03 |
|---|
| meiosis I | GO:0007127 | | 1.087E-05 | 5.232E-03 |
|---|
| positive regulation of helicase activity | GO:0051096 | | 1.309E-05 | 5.25E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 1.309E-05 | 4.5E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 1.962E-05 | 5.902E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 1.962E-05 | 5.246E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 2.745E-05 | 6.605E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 2.745E-05 | 6.004E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.9E-08 | 2.047E-04 |
|---|
| response to UV | GO:0009411 | | 9.495E-07 | 1.092E-03 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.265E-06 | 1.737E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 5.494E-06 | 3.159E-03 |
|---|
| response to light stimulus | GO:0009416 | | 1.825E-05 | 8.396E-03 |
|---|
| meiosis I | GO:0007127 | | 1.971E-05 | 7.555E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.649E-05 | 8.703E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.649E-05 | 7.615E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.649E-05 | 6.769E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.969E-05 | 9.129E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.969E-05 | 8.299E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.9E-08 | 2.047E-04 |
|---|
| response to UV | GO:0009411 | | 9.495E-07 | 1.092E-03 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.265E-06 | 1.737E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 5.494E-06 | 3.159E-03 |
|---|
| response to light stimulus | GO:0009416 | | 1.825E-05 | 8.396E-03 |
|---|
| meiosis I | GO:0007127 | | 1.971E-05 | 7.555E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.649E-05 | 8.703E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.649E-05 | 7.615E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.649E-05 | 6.769E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.969E-05 | 9.129E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.969E-05 | 8.299E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.9E-08 | 2.047E-04 |
|---|
| response to UV | GO:0009411 | | 9.495E-07 | 1.092E-03 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.265E-06 | 1.737E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 5.494E-06 | 3.159E-03 |
|---|
| response to light stimulus | GO:0009416 | | 1.825E-05 | 8.396E-03 |
|---|
| meiosis I | GO:0007127 | | 1.971E-05 | 7.555E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.649E-05 | 8.703E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.649E-05 | 7.615E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.649E-05 | 6.769E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.969E-05 | 9.129E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.969E-05 | 8.299E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.9E-08 | 2.047E-04 |
|---|
| response to UV | GO:0009411 | | 9.495E-07 | 1.092E-03 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.265E-06 | 1.737E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 5.494E-06 | 3.159E-03 |
|---|
| response to light stimulus | GO:0009416 | | 1.825E-05 | 8.396E-03 |
|---|
| meiosis I | GO:0007127 | | 1.971E-05 | 7.555E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.649E-05 | 8.703E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.649E-05 | 7.615E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.649E-05 | 6.769E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.969E-05 | 9.129E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.969E-05 | 8.299E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 5.329E-08 | 1.265E-04 |
|---|
| response to UV | GO:0009411 | | 6.226E-07 | 7.387E-04 |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 2.241E-06 | 1.773E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 4.349E-06 | 2.58E-03 |
|---|
| meiosis I | GO:0007127 | | 1.927E-05 | 9.145E-03 |
|---|
| skeletal myofibril assembly | GO:0014866 | | 2.047E-05 | 8.098E-03 |
|---|
| attachment of GPI anchor to protein | GO:0016255 | | 2.047E-05 | 6.941E-03 |
|---|
| determination of adult lifespan | GO:0008340 | | 2.047E-05 | 6.073E-03 |
|---|
| regulation of helicase activity | GO:0051095 | | 3.068E-05 | 8.09E-03 |
|---|
| negative regulation of DNA recombination | GO:0045910 | | 3.068E-05 | 7.281E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.292E-05 | 9.259E-03 |
|---|
