Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 763

score

Dataset	Score	P-val 1	P-val 2	P-val 3	Fisher Score
Desmedt	0.3298	1.767e-03	3.400e-05	1.738e-01	1.044e-08
IPC	0.3473	3.382e-01	1.693e-01	9.334e-01	5.343e-02
Loi	0.4472	2.040e-04	0.000e+00	6.971e-02	0.000e+00
Schmidt	0.5796	3.000e-06	0.000e+00	1.601e-01	0.000e+00
Wang	0.2388	1.553e-02	1.030e-01	3.160e-01	5.057e-04

Expression data for subnetwork 763 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Desmedt IPC Loi Schmidt Wang

Desmedt

Score for each gene in subnetwork 763 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC	Loi	Schmidt	Wang
TNFRSF1B		12	55	563	544	0.109	0.024	-0.187	-0.096	-0.106
DAB2		13	47	1	15	0.258	-0.175	0.067	-0.022	0.071
TXN		5	148	657	634	0.113	0.124	0.012	0.014	-0.006
SH3RF1		14	42	117	120	undef	0.144	0.238	undef	undef
ARHGEF7		12	55	492	475	-0.180	-0.074	-0.061	0.208	0.015
PIK3R1		91	1	1	1	0.189	-0.237	0.381	0.065	-0.002
ADAM15		13	47	492	474	0.205	-0.048	-0.078	-0.208	-0.048
MYO6		3	265	923	909	0.197	-0.011	0.139	-0.128	-0.031
SPSB1		7	100	492	495	0.044	-0.124	0.088	-0.152	0.169
LRRC59		1	652	1447	1447	-0.079	0.049	0.058	-0.016	0.028
CAV2		52	6	117	118	0.380	-0.013	0.165	0.065	0.101
EGFR		72	2	117	117	0.064	-0.195	0.240	-0.205	0.065
RASA1		9	77	492	494	0.237	-0.079	0.146	0.127	0.149
FGFR1		41	10	129	123	0.205	-0.036	0.200	0.087	-0.015

GO Enrichment output for subnetwork 763 in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of nitric oxide biosynthetic process	GO:0045428		6.835E-06	0.01572
actin filament-based movement	GO:0030048		6.835E-06	7.86E-03
vasculogenesis	GO:0001570		9.209E-06	7.06E-03
DNA damage response. signal transduction by p53 class mediator	GO:0030330		9.209E-06	5.295E-03
positive regulation of vasoconstriction	GO:0045907		3.443E-05	0.01583883
positive regulation of microtubule polymerization	GO:0031116		3.443E-05	0.01319903
interaction with symbiont	GO:0051702		5.159E-05	0.01695012
gas homeostasis	GO:0033483		5.159E-05	0.01483136
positive regulation of microtubule polymerization or depolymerization	GO:0031112		5.159E-05	0.01318343
regulation of microtubule polymerization	GO:0031113		5.159E-05	0.01186509
cytoskeleton-dependent intracellular transport	GO:0030705		5.773E-05	0.0120708

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of nitric oxide biosynthetic process	GO:0045428		5.951E-06	0.01453919
actin filament-based movement	GO:0030048		5.951E-06	7.27E-03
DNA damage response. signal transduction by p53 class mediator	GO:0030330		6.883E-06	5.605E-03
vasculogenesis	GO:0001570		1.024E-05	6.256E-03
regulation of phospholipase A2 activity	GO:0032429		2.793E-05	0.01364641
positive regulation of vasoconstriction	GO:0045907		2.793E-05	0.01137201
protein insertion into membrane	GO:0051205		2.793E-05	9.747E-03
interaction with symbiont	GO:0051702		4.185E-05	0.01277959
cytoskeleton-dependent intracellular transport	GO:0030705		5.378E-05	0.01459876
negative regulation of JAK-STAT cascade	GO:0046426		5.852E-05	0.01429758
vesicle fusion	GO:0006906		5.852E-05	0.0129978

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of nitric oxide biosynthetic process	GO:0045428		4.811E-06	0.01157637
actin filament-based movement	GO:0030048		4.811E-06	5.788E-03
DNA damage response. signal transduction by p53 class mediator	GO:0030330		6.484E-06	5.201E-03
vasculogenesis	GO:0001570		9.651E-06	5.805E-03
regulation of phospholipase A2 activity	GO:0032429		2.693E-05	0.0129568
positive regulation of vasoconstriction	GO:0045907		2.693E-05	0.01079733
interaction with symbiont	GO:0051702		4.035E-05	0.01386754
positive regulation of microtubule polymerization	GO:0031116		4.035E-05	0.01213409
cytoskeleton-dependent intracellular transport	GO:0030705		4.722E-05	0.01262386
negative regulation of JAK-STAT cascade	GO:0046426		5.642E-05	0.01357575
vesicle fusion	GO:0006906		5.642E-05	0.01234159

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of nitric oxide biosynthetic process	GO:0045428		6.835E-06	0.01572
actin filament-based movement	GO:0030048		6.835E-06	7.86E-03
vasculogenesis	GO:0001570		9.209E-06	7.06E-03
DNA damage response. signal transduction by p53 class mediator	GO:0030330		9.209E-06	5.295E-03
positive regulation of vasoconstriction	GO:0045907		3.443E-05	0.01583883
positive regulation of microtubule polymerization	GO:0031116		3.443E-05	0.01319903
interaction with symbiont	GO:0051702		5.159E-05	0.01695012
gas homeostasis	GO:0033483		5.159E-05	0.01483136
positive regulation of microtubule polymerization or depolymerization	GO:0031112		5.159E-05	0.01318343
regulation of microtubule polymerization	GO:0031113		5.159E-05	0.01186509
cytoskeleton-dependent intracellular transport	GO:0030705		5.773E-05	0.0120708

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of nitric oxide biosynthetic process	GO:0045428		6.835E-06	0.01572
actin filament-based movement	GO:0030048		6.835E-06	7.86E-03
vasculogenesis	GO:0001570		9.209E-06	7.06E-03
DNA damage response. signal transduction by p53 class mediator	GO:0030330		9.209E-06	5.295E-03
positive regulation of vasoconstriction	GO:0045907		3.443E-05	0.01583883
positive regulation of microtubule polymerization	GO:0031116		3.443E-05	0.01319903
interaction with symbiont	GO:0051702		5.159E-05	0.01695012
gas homeostasis	GO:0033483		5.159E-05	0.01483136
positive regulation of microtubule polymerization or depolymerization	GO:0031112		5.159E-05	0.01318343
regulation of microtubule polymerization	GO:0031113		5.159E-05	0.01186509
cytoskeleton-dependent intracellular transport	GO:0030705		5.773E-05	0.0120708