Study VanDeVijver-ER-neg
Study informations
122 subnetworks in total page | file
1481 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1258
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 | Fisher Score |
|---|
| Desmedt | 0.3361 | 1.331e-03 | 2.100e-05 | 1.538e-01 | 4.299e-09 |
|---|
| IPC | 0.3240 | 3.764e-01 | 2.033e-01 | 9.413e-01 | 7.205e-02 |
|---|
| Loi | 0.4866 | 3.400e-05 | 0.000e+00 | 4.843e-02 | 0.000e+00 |
|---|
| Schmidt | 0.5980 | 1.000e-06 | 0.000e+00 | 1.169e-01 | 0.000e+00 |
|---|
| Wang | 0.2543 | 8.606e-03 | 7.141e-02 | 2.428e-01 | 1.492e-04 |
|---|
Expression data for subnetwork 1258 in each dataset
Desmedt |
IPC |
Loi |
Schmidt |
Wang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1258 in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC | Loi | Schmidt | Wang |
|---|
| FGFR4 |   | 37 | 12 | 262 | 262 | 0.171 | -0.011 | 0.188 | -0.089 | -0.049 |
|---|
| CTSB | | 1 | 652 | 1077 | 1084 | 0.076 | 0.203 | -0.063 | 0.020 | 0.192 |
|---|
| TGFA | | 8 | 84 | 439 | 429 | 0.077 | -0.057 | -0.027 | -0.158 | 0.020 |
|---|
| LUM | | 1 | 652 | 1077 | 1084 | 0.214 | 0.214 | 0.179 | 0.046 | 0.067 |
|---|
| PIK3R1 | | 91 | 1 | 1 | 1 | 0.189 | -0.237 | 0.381 | 0.065 | -0.002 |
|---|
| EXTL3 | | 1 | 652 | 1077 | 1084 | 0.151 | -0.085 | 0.044 | 0.182 | -0.014 |
|---|
| RXRA | | 3 | 265 | 283 | 292 | -0.062 | -0.055 | 0.134 | -0.027 | -0.096 |
|---|
| DAG1 | | 2 | 391 | 283 | 301 | 0.021 | -0.197 | 0.258 | 0.049 | 0.039 |
|---|
| EGFR | | 72 | 2 | 117 | 117 | 0.064 | -0.195 | 0.240 | -0.205 | 0.065 |
|---|
| FGFR1 | | 41 | 10 | 129 | 123 | 0.205 | -0.036 | 0.200 | 0.087 | -0.015 |
|---|
| HSPA1B | | 1 | 652 | 1077 | 1084 | -0.173 | 0.075 | 0.117 | -0.061 | 0.223 |
|---|
| INSR | | 47 | 7 | 1 | 5 | 0.135 | 0.063 | 0.173 | 0.135 | -0.072 |
|---|
| DOK4 | | 1 | 652 | 1077 | 1084 | 0.053 | 0.068 | -0.038 | -0.047 | 0.084 |
|---|
| IGF1 | | 6 | 120 | 398 | 386 | 0.265 | -0.207 | -0.028 | 0.059 | -0.036 |
|---|
| ACAN | | 4 | 198 | 797 | 792 | -0.060 | 0.156 | 0.132 | -0.024 | -0.083 |
|---|
| HMGA1 | | 1 | 652 | 1077 | 1084 | 0.002 | -0.108 | -0.039 | -0.059 | -0.071 |
|---|
| CAV2 | | 52 | 6 | 117 | 118 | 0.380 | -0.013 | 0.165 | 0.065 | 0.101 |
|---|
| TRIP4 | | 1 | 652 | 1077 | 1084 | 0.125 | -0.091 | 0.246 | -0.063 | 0.019 |
|---|
| IGF2 | | 6 | 120 | 532 | 514 | 0.261 | -0.022 | 0.172 | 0.145 | 0.116 |
|---|
GO Enrichment output for subnetwork 1258 in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 |  | 2.047E-07 | 4.707E-04 |
|---|
| positive regulation of glycolysis | GO:0045821 | | 2.061E-07 | 2.37E-04 |
|---|
| regulation of nitric oxide biosynthetic process | GO:0045428 | | 2.553E-07 | 1.957E-04 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 5.553E-07 | 3.193E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.147E-06 | 5.278E-04 |
|---|
| positive regulation of glucose metabolic process | GO:0010907 | | 1.718E-06 | 6.585E-04 |
|---|
| regulation of glycolysis | GO:0006110 | | 1.718E-06 | 5.644E-04 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.374E-06 | 6.826E-04 |
|---|
| regulation of cellular carbohydrate catabolic process | GO:0043471 | | 2.449E-06 | 6.259E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 4.168E-06 | 9.586E-04 |
|---|
| positive regulation of cellular catabolic process | GO:0031331 | | 4.472E-06 | 9.351E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of nitric oxide biosynthetic process | GO:0045428 | | 5.242E-08 | 1.281E-04 |
|---|
| positive regulation of glycolysis | GO:0045821 | | 5.293E-08 | 6.465E-05 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 9.269E-08 | 7.548E-05 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.525E-07 | 9.313E-05 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 2.953E-07 | 1.443E-04 |
|---|
| positive regulation of glucose metabolic process | GO:0010907 | | 4.424E-07 | 1.801E-04 |
|---|
| regulation of glycolysis | GO:0006110 | | 4.424E-07 | 1.544E-04 |
|---|
| regulation of cellular carbohydrate catabolic process | GO:0043471 | | 6.311E-07 | 1.927E-04 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 6.321E-07 | 1.716E-04 |
|---|
| positive regulation of cellular catabolic process | GO:0031331 | | 1.154E-06 | 2.82E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 1.264E-06 | 2.807E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of nitric oxide biosynthetic process | GO:0045428 | | 5.862E-08 | 1.41E-04 |
|---|
| positive regulation of glycolysis | GO:0045821 | | 6.759E-08 | 8.132E-05 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 8.824E-08 | 7.077E-05 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.793E-07 | 1.079E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 3.77E-07 | 1.814E-04 |
|---|
| positive regulation of glucose metabolic process | GO:0010907 | | 5.647E-07 | 2.264E-04 |
|---|
| regulation of glycolysis | GO:0006110 | | 5.647E-07 | 1.941E-04 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 7.798E-07 | 2.345E-04 |
|---|
| regulation of cellular carbohydrate catabolic process | GO:0043471 | | 8.056E-07 | 2.154E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 1.445E-06 | 3.476E-04 |
|---|
| positive regulation of cellular catabolic process | GO:0031331 | | 1.473E-06 | 3.222E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 2.047E-07 | 4.707E-04 |
|---|
| positive regulation of glycolysis | GO:0045821 | | 2.061E-07 | 2.37E-04 |
|---|
| regulation of nitric oxide biosynthetic process | GO:0045428 | | 2.553E-07 | 1.957E-04 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 5.553E-07 | 3.193E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.147E-06 | 5.278E-04 |
|---|
| positive regulation of glucose metabolic process | GO:0010907 | | 1.718E-06 | 6.585E-04 |
|---|
| regulation of glycolysis | GO:0006110 | | 1.718E-06 | 5.644E-04 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.374E-06 | 6.826E-04 |
|---|
| regulation of cellular carbohydrate catabolic process | GO:0043471 | | 2.449E-06 | 6.259E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 4.168E-06 | 9.586E-04 |
|---|
| positive regulation of cellular catabolic process | GO:0031331 | | 4.472E-06 | 9.351E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 2.047E-07 | 4.707E-04 |
|---|
| positive regulation of glycolysis | GO:0045821 | | 2.061E-07 | 2.37E-04 |
|---|
| regulation of nitric oxide biosynthetic process | GO:0045428 | | 2.553E-07 | 1.957E-04 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 5.553E-07 | 3.193E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.147E-06 | 5.278E-04 |
|---|
| positive regulation of glucose metabolic process | GO:0010907 | | 1.718E-06 | 6.585E-04 |
|---|
| regulation of glycolysis | GO:0006110 | | 1.718E-06 | 5.644E-04 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.374E-06 | 6.826E-04 |
|---|
| regulation of cellular carbohydrate catabolic process | GO:0043471 | | 2.449E-06 | 6.259E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 4.168E-06 | 9.586E-04 |
|---|
| positive regulation of cellular catabolic process | GO:0031331 | | 4.472E-06 | 9.351E-04 |
|---|
