Study VanDeVijver-ER-neg
Study informations
122 subnetworks in total page | file
1481 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1252
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 | Fisher Score |
|---|
| Desmedt | 0.3346 | 1.426e-03 | 2.400e-05 | 1.585e-01 | 5.424e-09 |
|---|
| IPC | 0.3258 | 3.734e-01 | 2.005e-01 | 9.407e-01 | 7.043e-02 |
|---|
| Loi | 0.4872 | 3.300e-05 | 0.000e+00 | 4.816e-02 | 0.000e+00 |
|---|
| Schmidt | 0.5985 | 1.000e-06 | 0.000e+00 | 1.160e-01 | 0.000e+00 |
|---|
| Wang | 0.2549 | 8.406e-03 | 7.037e-02 | 2.402e-01 | 1.421e-04 |
|---|
Expression data for subnetwork 1252 in each dataset
Desmedt |
IPC |
Loi |
Schmidt |
Wang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1252 in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC | Loi | Schmidt | Wang |
|---|
| IRS1 |   | 14 | 42 | 1 | 14 | 0.217 | -0.219 | 0.065 | 0.165 | 0.064 |
|---|
| FGFR4 | | 37 | 12 | 262 | 262 | 0.171 | -0.011 | 0.188 | -0.089 | -0.049 |
|---|
| BMP2 | | 7 | 100 | 33 | 37 | -0.155 | -0.011 | 0.097 | 0.148 | -0.069 |
|---|
| GREM1 | | 5 | 148 | 57 | 63 | 0.213 | -0.073 | 0.200 | 0.028 | 0.261 |
|---|
| CDH1 | | 54 | 5 | 1 | 4 | 0.211 | -0.227 | 0.187 | -0.236 | -0.024 |
|---|
| PRKCB | | 8 | 84 | 33 | 35 | 0.081 | -0.065 | 0.001 | -0.148 | -0.035 |
|---|
| TGFA | | 8 | 84 | 439 | 429 | 0.077 | -0.057 | -0.027 | -0.158 | 0.020 |
|---|
| PIK3R1 | | 91 | 1 | 1 | 1 | 0.189 | -0.237 | 0.381 | 0.065 | -0.002 |
|---|
| IGF1 | | 6 | 120 | 398 | 386 | 0.265 | -0.207 | -0.028 | 0.059 | -0.036 |
|---|
| GSK3B | | 47 | 7 | 33 | 28 | 0.117 | -0.130 | 0.292 | -0.129 | 0.057 |
|---|
| CDH2 | | 7 | 100 | 33 | 37 | -0.228 | 0.169 | 0.109 | -0.016 | 0.155 |
|---|
| HCK | | 3 | 265 | 598 | 596 | -0.066 | -0.112 | -0.228 | -0.124 | -0.072 |
|---|
| EGFR | | 72 | 2 | 117 | 117 | 0.064 | -0.195 | 0.240 | -0.205 | 0.065 |
|---|
| FGFR1 | | 41 | 10 | 129 | 123 | 0.205 | -0.036 | 0.200 | 0.087 | -0.015 |
|---|
GO Enrichment output for subnetwork 1252 in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 |  | 9.368E-10 | 2.155E-06 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 5.107E-08 | 5.873E-05 |
|---|
| insulin-like growth factor receptor signaling pathway | GO:0048009 | | 4.089E-07 | 3.135E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 1.053E-06 | 6.057E-04 |
|---|
| branching morphogenesis of a tube | GO:0048754 | | 1.427E-06 | 6.566E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.892E-06 | 7.252E-04 |
|---|
| branching involved in ureteric bud morphogenesis | GO:0001658 | | 2.636E-06 | 8.66E-04 |
|---|
| morphogenesis of a branching structure | GO:0001763 | | 2.675E-06 | 7.691E-04 |
|---|
| positive regulation of cell migration | GO:0030335 | | 3.146E-06 | 8.04E-04 |
|---|
| positive regulation of cell motion | GO:0051272 | | 4.591E-06 | 1.056E-03 |
|---|
| positive regulation of nucleocytoplasmic transport | GO:0046824 | | 4.904E-06 | 1.025E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 2.04E-10 | 4.984E-07 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 3.048E-08 | 3.724E-05 |
|---|
| insulin-like growth factor receptor signaling pathway | GO:0048009 | | 1.93E-07 | 1.572E-04 |
|---|
| branching morphogenesis of a tube | GO:0048754 | | 4.187E-07 | 2.557E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 4.187E-07 | 2.046E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 5.451E-07 | 2.22E-04 |
|---|
| morphogenesis of a branching structure | GO:0001763 | | 7.554E-07 | 2.636E-04 |
|---|
| branching involved in ureteric bud morphogenesis | GO:0001658 | | 8.325E-07 | 2.542E-04 |
|---|
| positive regulation of cell migration | GO:0030335 | | 1.177E-06 | 3.195E-04 |
|---|
| positive regulation of cell motion | GO:0051272 | | 1.865E-06 | 4.556E-04 |
|---|
| positive regulation of nucleocytoplasmic transport | GO:0046824 | | 2.593E-06 | 5.758E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 3.03E-10 | 7.29E-07 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 3.118E-08 | 3.751E-05 |
|---|
| insulin-like growth factor receptor signaling pathway | GO:0048009 | | 2.602E-07 | 2.087E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 5.142E-07 | 3.093E-04 |
|---|
| branching morphogenesis of a tube | GO:0048754 | | 6.194E-07 | 2.981E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 8.063E-07 | 3.233E-04 |
|---|
| morphogenesis of a branching structure | GO:0001763 | | 1.117E-06 | 3.839E-04 |
|---|
| branching involved in ureteric bud morphogenesis | GO:0001658 | | 1.122E-06 | 3.373E-04 |
|---|
| positive regulation of cell migration | GO:0030335 | | 1.621E-06 | 4.333E-04 |
|---|
| positive regulation of cell motion | GO:0051272 | | 2.587E-06 | 6.225E-04 |
|---|
| positive regulation of nucleocytoplasmic transport | GO:0046824 | | 3.491E-06 | 7.635E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 9.368E-10 | 2.155E-06 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 5.107E-08 | 5.873E-05 |
|---|
| insulin-like growth factor receptor signaling pathway | GO:0048009 | | 4.089E-07 | 3.135E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 1.053E-06 | 6.057E-04 |
|---|
| branching morphogenesis of a tube | GO:0048754 | | 1.427E-06 | 6.566E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.892E-06 | 7.252E-04 |
|---|
| branching involved in ureteric bud morphogenesis | GO:0001658 | | 2.636E-06 | 8.66E-04 |
|---|
| morphogenesis of a branching structure | GO:0001763 | | 2.675E-06 | 7.691E-04 |
|---|
| positive regulation of cell migration | GO:0030335 | | 3.146E-06 | 8.04E-04 |
|---|
| positive regulation of cell motion | GO:0051272 | | 4.591E-06 | 1.056E-03 |
|---|
| positive regulation of nucleocytoplasmic transport | GO:0046824 | | 4.904E-06 | 1.025E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 9.368E-10 | 2.155E-06 |
|---|
| positive regulation of epithelial cell proliferation | GO:0050679 | | 5.107E-08 | 5.873E-05 |
|---|
| insulin-like growth factor receptor signaling pathway | GO:0048009 | | 4.089E-07 | 3.135E-04 |
|---|
| regulation of epithelial cell proliferation | GO:0050678 | | 1.053E-06 | 6.057E-04 |
|---|
| branching morphogenesis of a tube | GO:0048754 | | 1.427E-06 | 6.566E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.892E-06 | 7.252E-04 |
|---|
| branching involved in ureteric bud morphogenesis | GO:0001658 | | 2.636E-06 | 8.66E-04 |
|---|
| morphogenesis of a branching structure | GO:0001763 | | 2.675E-06 | 7.691E-04 |
|---|
| positive regulation of cell migration | GO:0030335 | | 3.146E-06 | 8.04E-04 |
|---|
| positive regulation of cell motion | GO:0051272 | | 4.591E-06 | 1.056E-03 |
|---|
| positive regulation of nucleocytoplasmic transport | GO:0046824 | | 4.904E-06 | 1.025E-03 |
|---|
