Study VanDeVijver-ER-neg
Study informations
122 subnetworks in total page | file
1481 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1182
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 | Fisher Score |
|---|
| Desmedt | 0.3309 | 1.684e-03 | 3.200e-05 | 1.703e-01 | 9.174e-09 |
|---|
| IPC | 0.3467 | 3.391e-01 | 1.700e-01 | 9.336e-01 | 5.382e-02 |
|---|
| Loi | 0.4793 | 4.800e-05 | 0.000e+00 | 5.196e-02 | 0.000e+00 |
|---|
| Schmidt | 0.6044 | 1.000e-06 | 0.000e+00 | 1.041e-01 | 0.000e+00 |
|---|
| Wang | 0.2573 | 7.636e-03 | 6.627e-02 | 2.298e-01 | 1.163e-04 |
|---|
Expression data for subnetwork 1182 in each dataset
Desmedt |
IPC |
Loi |
Schmidt |
Wang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1182 in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC | Loi | Schmidt | Wang |
|---|
| FGFR4 |   | 37 | 12 | 262 | 262 | 0.171 | -0.011 | 0.188 | -0.089 | -0.049 |
|---|
| PDLIM7 | | 2 | 391 | 398 | 411 | -0.075 | -0.054 | 0.224 | -0.015 | 0.268 |
|---|
| MX1 | | 3 | 265 | 398 | 404 | 0.143 | 0.092 | -0.016 | -0.165 | -0.267 |
|---|
| KRT17 | | 2 | 391 | 398 | 411 | 0.187 | -0.129 | 0.174 | -0.183 | -0.072 |
|---|
| BTC | | 3 | 265 | 398 | 404 | 0.139 | 0.226 | 0.025 | -0.097 | -0.059 |
|---|
| BRD4 | | 18 | 26 | 1 | 12 | 0.156 | -0.119 | 0.095 | -0.075 | -0.044 |
|---|
| TRAF2 | | 6 | 120 | 206 | 200 | -0.107 | 0.185 | -0.172 | -0.013 | -0.092 |
|---|
| COL1A1 | | 1 | 652 | 398 | 436 | 0.163 | -0.156 | 0.244 | -0.021 | 0.086 |
|---|
| PIK3R1 | | 91 | 1 | 1 | 1 | 0.189 | -0.237 | 0.381 | 0.065 | -0.002 |
|---|
| EGF | | 11 | 59 | 398 | 383 | -0.009 | -0.212 | 0.182 | -0.276 | 0.005 |
|---|
| ITGA5 | | 5 | 148 | 339 | 337 | 0.093 | 0.031 | 0.192 | 0.125 | 0.202 |
|---|
| ODC1 | | 5 | 148 | 398 | 387 | -0.220 | -0.006 | -0.099 | 0.209 | -0.107 |
|---|
| EGFR | | 72 | 2 | 117 | 117 | 0.064 | -0.195 | 0.240 | -0.205 | 0.065 |
|---|
| FGFR1 | | 41 | 10 | 129 | 123 | 0.205 | -0.036 | 0.200 | 0.087 | -0.015 |
|---|
| MAP1B | | 13 | 47 | 148 | 148 | 0.118 | -0.123 | 0.263 | -0.107 | 0.100 |
|---|
| SPP1 | | 4 | 198 | 339 | 341 | 0.068 | 0.130 | 0.119 | 0.184 | 0.153 |
|---|
| MUC1 | | 39 | 11 | 1 | 7 | 0.215 | 0.063 | 0.214 | -0.190 | -0.132 |
|---|
| FAM107A | | 2 | 391 | 398 | 411 | 0.142 | -0.102 | -0.043 | 0.144 | -0.014 |
|---|
| IGF1 | | 6 | 120 | 398 | 386 | 0.265 | -0.207 | -0.028 | 0.059 | -0.036 |
|---|
| FGF7 | | 8 | 84 | 398 | 384 | 0.026 | -0.094 | 0.237 | 0.070 | 0.083 |
|---|
| ACTB | | 7 | 100 | 398 | 385 | -0.052 | -0.039 | 0.283 | -0.061 | 0.003 |
|---|
| S100A9 | | 18 | 26 | 398 | 382 | 0.154 | 0.117 | 0.043 | -0.110 | -0.045 |
|---|
| CAV2 | | 52 | 6 | 117 | 118 | 0.380 | -0.013 | 0.165 | 0.065 | 0.101 |
|---|
| C16orf48 | | 1 | 652 | 398 | 436 | undef | 0.169 | 0.130 | undef | undef |
|---|
| TUBB | | 2 | 391 | 398 | 411 | -0.201 | -0.118 | 0.170 | 0.200 | -0.045 |
|---|
GO Enrichment output for subnetwork 1182 in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| spindle assembly | GO:0051225 |  | 4.055E-10 | 9.327E-07 |
|---|
| natural killer cell mediated immunity | GO:0002228 | | 1.013E-08 | 1.164E-05 |
|---|
| leukocyte mediated cytotoxicity | GO:0001909 | | 2.64E-08 | 2.024E-05 |
|---|
| intermediate filament cytoskeleton organization | GO:0045104 | | 5.694E-08 | 3.274E-05 |
|---|
| intermediate filament-based process | GO:0045103 | | 7.953E-08 | 3.658E-05 |
|---|
| cell killing | GO:0001906 | | 7.953E-08 | 3.049E-05 |
|---|
| fibroblast growth factor receptor signaling pathway | GO:0008543 | | 8.251E-07 | 2.711E-04 |
|---|
| regulation of granule cell precursor proliferation | GO:0021936 | | 9.666E-07 | 2.779E-04 |
|---|
| intermediate filament organization | GO:0045109 | | 9.666E-07 | 2.47E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.543E-06 | 3.549E-04 |
|---|
| spindle organization | GO:0007051 | | 2.099E-06 | 4.389E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| spindle assembly | GO:0051225 | | 8.639E-11 | 2.11E-07 |
|---|
| natural killer cell mediated immunity | GO:0002228 | | 3.6E-09 | 4.397E-06 |
|---|
| fibroblast growth factor receptor signaling pathway | GO:0008543 | | 3.893E-09 | 3.17E-06 |
|---|
| leukocyte mediated cytotoxicity | GO:0001909 | | 8.458E-09 | 5.166E-06 |
|---|
| intermediate filament cytoskeleton organization | GO:0045104 | | 2.321E-08 | 1.134E-05 |
|---|
| cell killing | GO:0001906 | | 2.321E-08 | 9.452E-06 |
|---|
| intermediate filament-based process | GO:0045103 | | 3.09E-08 | 1.079E-05 |
|---|
| regulation of granule cell precursor proliferation | GO:0021936 | | 3.014E-07 | 9.203E-05 |
|---|
| intermediate filament organization | GO:0045109 | | 4.815E-07 | 1.307E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 4.815E-07 | 1.176E-04 |
|---|
| spindle organization | GO:0007051 | | 5.954E-07 | 1.322E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| spindle assembly | GO:0051225 | | 1.05E-10 | 2.526E-07 |
|---|
| natural killer cell mediated immunity | GO:0002228 | | 4.373E-09 | 5.26E-06 |
|---|
| leukocyte mediated cytotoxicity | GO:0001909 | | 1.027E-08 | 8.239E-06 |
|---|
| intermediate filament cytoskeleton organization | GO:0045104 | | 2.819E-08 | 1.696E-05 |
|---|
| cell killing | GO:0001906 | | 2.819E-08 | 1.356E-05 |
|---|
| intermediate filament-based process | GO:0045103 | | 3.752E-08 | 1.505E-05 |
|---|
| fibroblast growth factor receptor signaling pathway | GO:0008543 | | 2.57E-07 | 8.832E-05 |
|---|
| regulation of granule cell precursor proliferation | GO:0021936 | | 3.496E-07 | 1.051E-04 |
|---|
| intermediate filament organization | GO:0045109 | | 5.585E-07 | 1.493E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 5.585E-07 | 1.344E-04 |
|---|
| spindle organization | GO:0007051 | | 7.221E-07 | 1.579E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| spindle assembly | GO:0051225 | | 4.055E-10 | 9.327E-07 |
|---|
| natural killer cell mediated immunity | GO:0002228 | | 1.013E-08 | 1.164E-05 |
|---|
| leukocyte mediated cytotoxicity | GO:0001909 | | 2.64E-08 | 2.024E-05 |
|---|
| intermediate filament cytoskeleton organization | GO:0045104 | | 5.694E-08 | 3.274E-05 |
|---|
| intermediate filament-based process | GO:0045103 | | 7.953E-08 | 3.658E-05 |
|---|
| cell killing | GO:0001906 | | 7.953E-08 | 3.049E-05 |
|---|
| fibroblast growth factor receptor signaling pathway | GO:0008543 | | 8.251E-07 | 2.711E-04 |
|---|
| regulation of granule cell precursor proliferation | GO:0021936 | | 9.666E-07 | 2.779E-04 |
|---|
| intermediate filament organization | GO:0045109 | | 9.666E-07 | 2.47E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.543E-06 | 3.549E-04 |
|---|
| spindle organization | GO:0007051 | | 2.099E-06 | 4.389E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| spindle assembly | GO:0051225 | | 4.055E-10 | 9.327E-07 |
|---|
| natural killer cell mediated immunity | GO:0002228 | | 1.013E-08 | 1.164E-05 |
|---|
| leukocyte mediated cytotoxicity | GO:0001909 | | 2.64E-08 | 2.024E-05 |
|---|
| intermediate filament cytoskeleton organization | GO:0045104 | | 5.694E-08 | 3.274E-05 |
|---|
| intermediate filament-based process | GO:0045103 | | 7.953E-08 | 3.658E-05 |
|---|
| cell killing | GO:0001906 | | 7.953E-08 | 3.049E-05 |
|---|
| fibroblast growth factor receptor signaling pathway | GO:0008543 | | 8.251E-07 | 2.711E-04 |
|---|
| regulation of granule cell precursor proliferation | GO:0021936 | | 9.666E-07 | 2.779E-04 |
|---|
| intermediate filament organization | GO:0045109 | | 9.666E-07 | 2.47E-04 |
|---|
| phosphoinositide 3-kinase cascade | GO:0014065 | | 1.543E-06 | 3.549E-04 |
|---|
| spindle organization | GO:0007051 | | 2.099E-06 | 4.389E-04 |
|---|
