Study VanDeVijver-ER-neg

Study informations

122 subnetworks in total page | file

1481 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 1143

score

DatasetScoreP-val 1P-val 2P-val 3Fisher Score
Desmedt0.33361.487e-032.600e-051.614e-016.240e-09
IPC0.34123.482e-011.779e-019.355e-015.795e-02
Loi0.47595.600e-050.000e+005.366e-020.000e+00
Schmidt0.59821.000e-060.000e+001.165e-010.000e+00
Wang0.25767.542e-036.576e-022.285e-011.133e-04

Expression data for subnetwork 1143 in each dataset

Desmedt | IPC | Loi | Schmidt | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 1143 in each dataset

Gene SymbolLinksFrequencyFrequency RankSubnetwork score rankGlobal rank DesmedtIPCLoiSchmidtWang
EP300EP300 on ITI EP300 on NCBI713120.016-0.1490.0870.1020.025
RGS4RGS4 on ITI RGS4 on NCBI326557710.1440.0220.160-0.0060.371
NCOR2NCOR2 on ITI NCOR2 on NCBI11592832740.024-0.0960.211-0.1630.114
PAX6PAX6 on ITI PAX6 on NCBI11592832740.0810.259-0.0030.1120.168
EGR1EGR1 on ITI EGR1 on NCBI11592832740.118-0.1840.2590.1300.122
BPTFBPTF on ITI BPTF on NCBI16528068220.076-0.0980.1590.1320.030
TP53TP53 on ITI TP53 on NCBI2815190.015-0.1670.148-0.0270.147
PPFIBP2PPFIBP2 on ITI PPFIBP2 on NCBI71006065760.0980.1880.320-0.1120.013
CCNA2CCNA2 on ITI CCNA2 on NCBI1540148144-0.0970.176-0.0530.1880.246
GTF2E2GTF2E2 on ITI GTF2E2 on NCBI16528068220.0260.096-0.1530.088-0.169
MYCMYC on ITI MYC on NCBI2421148137-0.056-0.101-0.1690.188-0.134
JUNBJUNB on ITI JUNB on NCBI51486966720.1010.0570.0860.065-0.015
GHRGHR on ITI GHR on NCBI1442148146-0.006-0.1120.1740.0900.201
EI24EI24 on ITI EI24 on NCBI884339336-0.0740.0510.0780.1070.070
PLK4PLK4 on ITI PLK4 on NCBI1652806822-0.1340.114-0.1540.2600.027
PPP2R2BPPP2R2B on ITI PPP2R2B on NCBI351318-0.2000.124-0.0190.029-0.073
RRAS2RRAS2 on ITI RRAS2 on NCBI6120563549-0.0890.1550.0760.2890.031
ETV1ETV1 on ITI ETV1 on NCBI11597467240.2140.0460.054-0.0650.141
SAMD4ASAMD4A on ITI SAMD4A on NCBI16528068220.0260.0090.1340.1890.187
TLE2TLE2 on ITI TLE2 on NCBI16528068220.0140.0100.0520.2020.093
SAP30SAP30 on ITI SAP30 on NCBI2391806806-0.0330.1860.0830.153-0.184
ZC4H2ZC4H2 on ITI ZC4H2 on NCBI1634339332-0.1450.0650.0610.3040.059
CALM1CALM1 on ITI CALM1 on NCBI326557710.0910.0140.0210.1920.247
PIK3R1PIK3R1 on ITI PIK3R1 on NCBI911110.189-0.2370.3810.065-0.002
FOSFOS on ITI FOS on NCBI20241481380.060-0.1370.1290.1850.234
NR2F1NR2F1 on ITI NR2F1 on NCBI61204444380.086-0.2520.1130.1330.207
SUPT16HSUPT16H on ITI SUPT16H on NCBI16528068220.0330.268-0.0280.155-0.024
TPRTPR on ITI TPR on NCBI10671481520.118-0.1300.120-0.0360.156
INSRINSR on ITI INSR on NCBI477150.1350.0630.1730.135-0.072
GRB7GRB7 on ITI GRB7 on NCBI13475751-0.0280.0210.115-0.0720.129
KLF5KLF5 on ITI KLF5 on NCBI25195750-0.0050.0770.117-0.007-0.006
H3F3AH3F3A on ITI H3F3A on NCBI16528068220.1560.2210.2320.151-0.142
SFNSFN on ITI SFN on NCBI32658067940.0440.1410.2700.0230.101
HDAC2HDAC2 on ITI HDAC2 on NCBI1652806822-0.0520.079-0.0940.1480.037

GO Enrichment output for subnetwork 1143 in each dataset

Desmedt file

NameAccession NumberLinkP-valCorrected P-val
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO2.035E-074.68E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO6.148E-077.07E-04
nucleosome organizationGO:0034728GO:0034728 on GO1.09E-068.36E-04
insulin-like growth factor receptor signaling pathwayGO:0048009GO:0048009 on GO3.109E-061.787E-03
chromatin assemblyGO:0031497GO:0031497 on GO1.471E-056.766E-03
induction of apoptosis by intracellular signalsGO:0008629GO:0008629 on GO1.722E-056.599E-03
protein-DNA complex assemblyGO:0065004GO:0065004 on GO1.866E-056.133E-03
regulation of gene-specific transcriptionGO:0032583GO:0032583 on GO2.304E-056.625E-03
positive regulation of growthGO:0045927GO:0045927 on GO4.213E-050.01076707
DNA damage response. signal transductionGO:0042770GO:0042770 on GO6.603E-050.01518586
protein tetramerizationGO:0051262GO:0051262 on GO8.221E-050.01718968


IPC file

NameAccession NumberLinkP-valCorrected P-val
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO3.773E-089.217E-05
regulation of gene-specific transcriptionGO:0032583GO:0032583 on GO1.175E-071.435E-04
nucleosome organizationGO:0034728GO:0034728 on GO1.614E-071.314E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO1.805E-071.102E-04
insulin-like growth factor receptor signaling pathwayGO:0048009GO:0048009 on GO1.304E-066.372E-04
positive regulation of gene-specific transcriptionGO:0043193GO:0043193 on GO1.487E-066.053E-04
nucleosome assemblyGO:0006334GO:0006334 on GO2.918E-061.018E-03
chromatin assemblyGO:0031497GO:0031497 on GO3.088E-069.429E-04
protein-DNA complex assemblyGO:0065004GO:0065004 on GO3.845E-061.044E-03
induction of apoptosis by intracellular signalsGO:0008629GO:0008629 on GO5.289E-061.292E-03
positive regulation of growthGO:0045927GO:0045927 on GO1.023E-052.273E-03


Loi file

NameAccession NumberLinkP-valCorrected P-val
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO5.788E-081.393E-04
regulation of gene-specific transcriptionGO:0032583GO:0032583 on GO1.989E-072.393E-04
nucleosome organizationGO:0034728GO:0034728 on GO2.481E-071.99E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO2.765E-071.663E-04
insulin-like growth factor receptor signaling pathwayGO:0048009GO:0048009 on GO1.8E-068.663E-04
positive regulation of gene-specific transcriptionGO:0043193GO:0043193 on GO2.271E-069.108E-04
nucleosome assemblyGO:0006334GO:0006334 on GO4.367E-061.501E-03
chromatin assemblyGO:0031497GO:0031497 on GO4.626E-061.391E-03
protein-DNA complex assemblyGO:0065004GO:0065004 on GO5.787E-061.547E-03
induction of apoptosis by intracellular signalsGO:0008629GO:0008629 on GO8.059E-061.939E-03
DNA integrationGO:0015074GO:0015074 on GO1.434E-053.136E-03


Schmidt file

NameAccession NumberLinkP-valCorrected P-val
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO2.035E-074.68E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO6.148E-077.07E-04
nucleosome organizationGO:0034728GO:0034728 on GO1.09E-068.36E-04
insulin-like growth factor receptor signaling pathwayGO:0048009GO:0048009 on GO3.109E-061.787E-03
chromatin assemblyGO:0031497GO:0031497 on GO1.471E-056.766E-03
induction of apoptosis by intracellular signalsGO:0008629GO:0008629 on GO1.722E-056.599E-03
protein-DNA complex assemblyGO:0065004GO:0065004 on GO1.866E-056.133E-03
regulation of gene-specific transcriptionGO:0032583GO:0032583 on GO2.304E-056.625E-03
positive regulation of growthGO:0045927GO:0045927 on GO4.213E-050.01076707
DNA damage response. signal transductionGO:0042770GO:0042770 on GO6.603E-050.01518586
protein tetramerizationGO:0051262GO:0051262 on GO8.221E-050.01718968


Wang file

NameAccession NumberLinkP-valCorrected P-val
release of cytochrome c from mitochondriaGO:0001836GO:0001836 on GO2.035E-074.68E-04
apoptotic mitochondrial changesGO:0008637GO:0008637 on GO6.148E-077.07E-04
nucleosome organizationGO:0034728GO:0034728 on GO1.09E-068.36E-04
insulin-like growth factor receptor signaling pathwayGO:0048009GO:0048009 on GO3.109E-061.787E-03
chromatin assemblyGO:0031497GO:0031497 on GO1.471E-056.766E-03
induction of apoptosis by intracellular signalsGO:0008629GO:0008629 on GO1.722E-056.599E-03
protein-DNA complex assemblyGO:0065004GO:0065004 on GO1.866E-056.133E-03
regulation of gene-specific transcriptionGO:0032583GO:0032583 on GO2.304E-056.625E-03
positive regulation of growthGO:0045927GO:0045927 on GO4.213E-050.01076707
DNA damage response. signal transductionGO:0042770GO:0042770 on GO6.603E-050.01518586
protein tetramerizationGO:0051262GO:0051262 on GO8.221E-050.01718968


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