Study Desmedt-ER-pos

Study informations

6 subnetworks in total page | file

175 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 204

score

Expression data for subnetwork 204 in each dataset

IPC | Loi | Schmidt | VanDeVijver | Wang |

Subnetwork structure for each dataset

Score for each gene in subnetwork 204 in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	IPC	Loi	Schmidt	VanDeVijver	Wang
MMP9		1	25	1	6	0.131	0.054	-0.014	0.222	0.086
CTSB		1	25	1	6	0.224	0.079	0.044	undef	-0.020
RIF1		2	9	1	4	0.053	-0.056	-0.038	undef	0.085
GADD45G		1	25	1	6	0.067	-0.017	0.025	-0.033	0.009
RET		1	25	1	6	-0.063	0.119	0.041	undef	0.006
FOXA3		1	25	1	6	-0.051	0.058	undef	0.156	undef
HSF1		1	25	1	6	-0.068	0.100	0.182	0.205	0.186
ERBB2		1	25	1	6	-0.012	0.088	0.191	0.138	-0.068
STAT5B		1	25	1	6	-0.029	-0.027	-0.123	0.019	-0.170
EN2		1	25	1	6	0.037	-0.011	-0.004	0.095	0.158
HSBP1		1	25	1	6	0.059	0.099	0.154	0.084	0.091
HSPA1A		1	25	1	6	0.116	0.077	0.173	0.021	0.209
RSRC1		1	25	1	6	0.236	0.006	0.295	-0.024	0.057
ADA		1	25	1	6	0.084	0.094	0.272	0.094	0.035
HAPLN1		1	25	1	6	0.142	0.086	-0.085	undef	0.083
TNPO2		1	25	1	6	0.092	0.068	0.159	0.016	0.007
FMR1		1	25	1	6	0.129	0.098	0.079	-0.034	0.003
GDF9		1	25	1	6	-0.037	0.103	0.176	-0.072	-0.154
TOMM70A		1	25	1	6	0.095	0.182	0.228	0.001	0.075
TK1		1	25	1	6	0.162	0.169	0.197	0.289	0.169
NCK1		1	25	1	6	0.127	0.044	0.103	-0.101	0.055
LDB1		1	25	1	6	0.000	-0.015	0.214	0.183	-0.137
ACTN1		1	25	1	6	0.066	-0.053	-0.030	0.184	0.068
ATF3		2	9	1	4	-0.016	0.092	-0.045	undef	-0.079
FBN2		1	25	1	6	0.212	0.093	-0.058	-0.058	0.247
FXR1		1	25	1	6	0.086	0.044	0.205	undef	0.149
MAPK8IP1		1	25	1	6	0.135	0.072	0.021	0.088	0.031
GRB2		4	1	1	1	0.037	0.087	0.182	0.183	-0.037
MAPKAPK2		3	3	1	3	-0.049	0.100	0.210	0.003	0.101
HPRT1		1	25	1	6	0.198	0.185	0.089	0.085	0.235
LHX4		1	25	1	6	0.205	0.125	undef	undef	undef
DCK		1	25	1	6	0.093	0.010	0.043	0.051	0.081
MATN2		1	25	1	6	-0.140	0.041	0.089	undef	-0.049
TLE1		1	25	1	6	-0.050	-0.002	0.079	0.144	-0.022
ROD1		1	25	1	6	0.082	0.047	0.038	0.157	-0.020
LMX1B		1	25	1	6	0.035	0.045	0.131	0.183	-0.007
SPRYD4		1	25	1	6	-0.076	0.109	undef	undef	undef
COL4A6		1	25	1	6	-0.099	-0.070	0.045	undef	0.118
ESR1		1	25	1	6	0.032	0.114	-0.064	-0.141	0.048
PDLIM5		1	25	1	6	0.067	-0.078	-0.286	-0.041	0.010
HSPB1		4	1	1	1	0.053	0.231	0.043	0.246	0.144
EYA2		1	25	1	6	0.054	0.119	0.097	undef	0.174
CPSF7		1	25	1	6	-0.111	-0.031	0.152	undef	-0.043
SIX2		1	25	1	6	-0.055	0.134	0.122	-0.003	0.120

GO Enrichment output for subnetwork 204 in each dataset

IPC file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of retinoic acid receptor signaling pathway	GO:0048385		4.538E-07	1.109E-03
purine salvage	GO:0043101		2.521E-06	3.079E-03
motor axon guidance	GO:0008045		5.374E-06	4.376E-03
cellular metabolic compound salvage	GO:0043094		7.369E-06	4.501E-03
regulation of erythrocyte differentiation	GO:0045646		1.271E-05	6.208E-03
regulation of T cell proliferation	GO:0042129		1.776E-05	7.23E-03
stem cell development	GO:0048864		2.468E-05	8.615E-03
regulation of T cell activation	GO:0050863		2.633E-05	8.039E-03
regulation of lymphocyte differentiation	GO:0045619		2.998E-05	8.139E-03
regulation of mast cell proliferation	GO:0070666		2.998E-05	7.325E-03
regulation of leukocyte proliferation	GO:0070663		4.098E-05	9.101E-03

Loi file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of retinoic acid receptor signaling pathway	GO:0048385		4.979E-07	1.198E-03
purine salvage	GO:0043101		1.733E-06	2.085E-03
cellular metabolic compound salvage	GO:0043094		5.895E-06	4.728E-03
regulation of T cell proliferation	GO:0042129		1.65E-05	9.927E-03
stem cell development	GO:0048864		1.769E-05	8.511E-03
regulation of erythrocyte differentiation	GO:0045646		1.769E-05	7.093E-03
regulation of T cell activation	GO:0050863		2.742E-05	9.424E-03
regulation of lymphocyte differentiation	GO:0045619		3.108E-05	9.348E-03
regulation of mast cell proliferation	GO:0070666		3.108E-05	8.309E-03
regulation of leukocyte proliferation	GO:0070663		3.958E-05	9.522E-03
estrogen receptor signaling pathway	GO:0030520		4.645E-05	0.01016018

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of retinoic acid receptor signaling pathway	GO:0048385		1.141E-06	2.625E-03
purine salvage	GO:0043101		2.274E-06	2.616E-03
cellular metabolic compound salvage	GO:0043094		9.451E-06	7.246E-03
regulation of T cell proliferation	GO:0042129		3.546E-05	0.02039146
regulation of erythrocyte differentiation	GO:0045646		4.023E-05	0.01850672
regulation of mast cell proliferation	GO:0070666		6.377E-05	0.0244454
regulation of T cell activation	GO:0050863		7.686E-05	0.02525518
regulation of leukocyte proliferation	GO:0070663		8.285E-05	0.02382036
estrogen receptor signaling pathway	GO:0030520		8.892E-05	0.02272286
gut development	GO:0048565		8.892E-05	0.02045057
regulation of lymphocyte differentiation	GO:0045619		9.005E-05	0.01882821

VanDeVijver file

Name	Accession Number	Link	P-val	Corrected P-val
cellular metabolic compound salvage	GO:0043094		1.484E-06	2.734E-03
regulation of T cell activation	GO:0050863		2.756E-06	2.539E-03
regulation of T cell proliferation	GO:0042129		3.488E-06	2.143E-03
regulation of mast cell proliferation	GO:0070666		5.594E-06	2.577E-03
regulation of lymphocyte activation	GO:0051249		6.046E-06	2.229E-03
regulation of lymphocyte proliferation	GO:0050670		6.469E-06	1.987E-03
purine ribonucleoside metabolic process	GO:0046128		8.797E-06	2.316E-03
regulation of erythrocyte differentiation	GO:0045646		8.797E-06	2.027E-03
regulation of lymphocyte differentiation	GO:0045619		9.706E-06	1.988E-03
regulation of leukocyte activation	GO:0002694		1.028E-05	1.894E-03
regulation of cell activation	GO:0050865		1.184E-05	1.983E-03

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of retinoic acid receptor signaling pathway	GO:0048385		1.141E-06	2.625E-03
purine salvage	GO:0043101		2.274E-06	2.616E-03
cellular metabolic compound salvage	GO:0043094		9.451E-06	7.246E-03
regulation of T cell proliferation	GO:0042129		3.546E-05	0.02039146
regulation of erythrocyte differentiation	GO:0045646		4.023E-05	0.01850672
regulation of mast cell proliferation	GO:0070666		6.377E-05	0.0244454
regulation of T cell activation	GO:0050863		7.686E-05	0.02525518
regulation of leukocyte proliferation	GO:0070663		8.285E-05	0.02382036
estrogen receptor signaling pathway	GO:0030520		8.892E-05	0.02272286
gut development	GO:0048565		8.892E-05	0.02045057
regulation of lymphocyte differentiation	GO:0045619		9.005E-05	0.01882821