Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 997-11-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1759	1.214e-02	2.329e-02	4.878e-02
IPC-NIBC-129	0.2161	5.437e-02	2.981e-02	2.216e-01
Ivshina_GPL96-GPL97	0.2339	2.222e-02	1.390e-02	2.139e-01
Loi_GPL570	0.2662	6.786e-02	4.459e-02	2.924e-01
Loi_GPL96-GPL97	0.1652	1.146e-02	1.360e-04	1.217e-01
Pawitan_GPL96-GPL97	0.3351	1.999e-01	1.197e-01	7.157e-01
Schmidt	0.2271	1.556e-02	2.169e-02	8.740e-02
Sotiriou	0.2985	1.042e-01	7.691e-02	5.716e-01
Zhang	0.1878	5.928e-03	8.812e-03	2.594e-02

Expression data for subnetwork 997-11-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 997-11-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
sp1		14	4	11	6	0.054	0.186	0.147	0.242	0.125	0.202	0.284	0.227	0.091
mybl2		9	7	29	13	0.162	0.237	0.166	0.079	0.124	0.275	0.202	0.182	0.074
cdc2		83	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.297
slc25a5		5	13	29	20	0.053	0.214	0.106	0.218	0.115	0.221	0.177	0.141	-0.019
cdc34		1	57	74	78	0.044	0.217	0.121	0.109	0.062	0.193	0.133	0.009	-0.040
ccnd1		76	2	1	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.144

GO Enrichment output for subnetwork 997-11-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		1.643E-06	3.78E-03
positive regulation of cell cycle	GO:0045787		1.889E-06	2.172E-03
plasminogen activation	GO:0031639		2.942E-06	2.256E-03
positive regulation of fibrinolysis	GO:0051919		4.412E-06	2.537E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.175E-06	2.841E-03
regulation of fibrinolysis	GO:0051917		8.231E-06	3.155E-03
zymogen activation	GO:0031638		1.322E-05	4.344E-03
interphase of mitotic cell cycle	GO:0051329		1.345E-05	3.868E-03
interphase	GO:0051325		1.442E-05	3.684E-03
negative regulation of cell cycle process	GO:0010948		3.08E-05	7.084E-03
cellular response to unfolded protein	GO:0034620		3.519E-05	7.358E-03

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		3.323E-07	8.117E-04
positive regulation of cell cycle	GO:0045787		3.785E-07	4.623E-04
meiotic chromosome segregation	GO:0045132		8.703E-07	7.087E-04
establishment of spindle localization	GO:0051293		1.305E-06	7.971E-04
plasminogen activation	GO:0031639		1.305E-06	6.377E-04
positive regulation of fibrinolysis	GO:0051919		1.827E-06	7.439E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.436E-06	8.5E-04
interphase of mitotic cell cycle	GO:0051329		3.3E-06	1.008E-03
regulation of fibrinolysis	GO:0051917		3.913E-06	1.062E-03
zymogen activation	GO:0031638		5.737E-06	1.402E-03
DNA replication initiation	GO:0006270		1.042E-05	2.315E-03

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.455E-07	1.312E-03
positive regulation of cell cycle	GO:0045787		6.213E-07	7.474E-04
meiotic chromosome segregation	GO:0045132		1.212E-06	9.721E-04
plasminogen activation	GO:0031639		1.212E-06	7.291E-04
establishment of spindle localization	GO:0051293		1.818E-06	8.747E-04
positive regulation of fibrinolysis	GO:0051919		1.818E-06	7.289E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.392E-06	1.166E-03
regulation of fibrinolysis	GO:0051917		4.36E-06	1.311E-03
interphase of mitotic cell cycle	GO:0051329		4.926E-06	1.317E-03
interphase	GO:0051325		5.409E-06	1.301E-03
zymogen activation	GO:0031638		6.658E-06	1.456E-03

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		3.323E-07	8.117E-04
positive regulation of cell cycle	GO:0045787		3.785E-07	4.623E-04
meiotic chromosome segregation	GO:0045132		8.703E-07	7.087E-04
establishment of spindle localization	GO:0051293		1.305E-06	7.971E-04
plasminogen activation	GO:0031639		1.305E-06	6.377E-04
positive regulation of fibrinolysis	GO:0051919		1.827E-06	7.439E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.436E-06	8.5E-04
interphase of mitotic cell cycle	GO:0051329		3.3E-06	1.008E-03
regulation of fibrinolysis	GO:0051917		3.913E-06	1.062E-03
zymogen activation	GO:0031638		5.737E-06	1.402E-03
DNA replication initiation	GO:0006270		1.042E-05	2.315E-03

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.455E-07	1.312E-03
positive regulation of cell cycle	GO:0045787		6.213E-07	7.474E-04
meiotic chromosome segregation	GO:0045132		1.212E-06	9.721E-04
plasminogen activation	GO:0031639		1.212E-06	7.291E-04
establishment of spindle localization	GO:0051293		1.818E-06	8.747E-04
positive regulation of fibrinolysis	GO:0051919		1.818E-06	7.289E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.392E-06	1.166E-03
regulation of fibrinolysis	GO:0051917		4.36E-06	1.311E-03
interphase of mitotic cell cycle	GO:0051329		4.926E-06	1.317E-03
interphase	GO:0051325		5.409E-06	1.301E-03
zymogen activation	GO:0031638		6.658E-06	1.456E-03

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.455E-07	1.312E-03
positive regulation of cell cycle	GO:0045787		6.213E-07	7.474E-04
meiotic chromosome segregation	GO:0045132		1.212E-06	9.721E-04
plasminogen activation	GO:0031639		1.212E-06	7.291E-04
establishment of spindle localization	GO:0051293		1.818E-06	8.747E-04
positive regulation of fibrinolysis	GO:0051919		1.818E-06	7.289E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.392E-06	1.166E-03
regulation of fibrinolysis	GO:0051917		4.36E-06	1.311E-03
interphase of mitotic cell cycle	GO:0051329		4.926E-06	1.317E-03
interphase	GO:0051325		5.409E-06	1.301E-03
zymogen activation	GO:0031638		6.658E-06	1.456E-03

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		1.643E-06	3.78E-03
positive regulation of cell cycle	GO:0045787		1.889E-06	2.172E-03
plasminogen activation	GO:0031639		2.942E-06	2.256E-03
positive regulation of fibrinolysis	GO:0051919		4.412E-06	2.537E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.175E-06	2.841E-03
regulation of fibrinolysis	GO:0051917		8.231E-06	3.155E-03
zymogen activation	GO:0031638		1.322E-05	4.344E-03
interphase of mitotic cell cycle	GO:0051329		1.345E-05	3.868E-03
interphase	GO:0051325		1.442E-05	3.684E-03
negative regulation of cell cycle process	GO:0010948		3.08E-05	7.084E-03
cellular response to unfolded protein	GO:0034620		3.519E-05	7.358E-03

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		1.643E-06	3.78E-03
positive regulation of cell cycle	GO:0045787		1.889E-06	2.172E-03
plasminogen activation	GO:0031639		2.942E-06	2.256E-03
positive regulation of fibrinolysis	GO:0051919		4.412E-06	2.537E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.175E-06	2.841E-03
regulation of fibrinolysis	GO:0051917		8.231E-06	3.155E-03
zymogen activation	GO:0031638		1.322E-05	4.344E-03
interphase of mitotic cell cycle	GO:0051329		1.345E-05	3.868E-03
interphase	GO:0051325		1.442E-05	3.684E-03
negative regulation of cell cycle process	GO:0010948		3.08E-05	7.084E-03
cellular response to unfolded protein	GO:0034620		3.519E-05	7.358E-03

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		1.643E-06	3.78E-03
positive regulation of cell cycle	GO:0045787		1.889E-06	2.172E-03
plasminogen activation	GO:0031639		2.942E-06	2.256E-03
positive regulation of fibrinolysis	GO:0051919		4.412E-06	2.537E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		6.175E-06	2.841E-03
regulation of fibrinolysis	GO:0051917		8.231E-06	3.155E-03
zymogen activation	GO:0031638		1.322E-05	4.344E-03
interphase of mitotic cell cycle	GO:0051329		1.345E-05	3.868E-03
interphase	GO:0051325		1.442E-05	3.684E-03
negative regulation of cell cycle process	GO:0010948		3.08E-05	7.084E-03
cellular response to unfolded protein	GO:0034620		3.519E-05	7.358E-03