Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 9055-10-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1508	1.145e-02	2.210e-02	4.619e-02
IPC-NIBC-129	0.2206	1.619e-01	1.104e-01	5.994e-01
Ivshina_GPL96-GPL97	0.2367	2.028e-02	1.246e-02	1.968e-01
Loi_GPL570	0.1777	8.016e-02	5.581e-02	3.324e-01
Loi_GPL96-GPL97	0.2212	2.780e-02	1.699e-03	3.247e-01
Pawitan_GPL96-GPL97	0.3257	1.522e-01	8.236e-02	6.212e-01
Schmidt	0.2151	4.170e-02	5.605e-02	2.240e-01
Sotiriou	0.2360	4.050e-02	2.859e-02	2.865e-01
Zhang	0.2138	6.935e-03	1.031e-02	2.969e-02

Expression data for subnetwork 9055-10-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 9055-10-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
racgap1		2	35	148	138	0.181	0.240	0.218	0.126	0.242	0.313	0.238	0.255	0.234
prc1		1	57	148	151	0.121	0.179	0.236	0.212	0.200	0.314	0.190	0.211	0.183

GO Enrichment output for subnetwork 9055-10-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		9.817E-08	1.129E-04
neuroblast proliferation	GO:0007405		1.374E-07	1.054E-04
sulfate transport	GO:0008272		2.945E-07	1.693E-04
mitotic spindle organization	GO:0007052		3.599E-07	1.656E-04
spindle organization	GO:0007051		2.847E-06	1.091E-03
actomyosin structure organization	GO:0031032		3.455E-06	1.135E-03
inorganic anion transport	GO:0015698		1.491E-05	4.286E-03
microtubule cytoskeleton organization	GO:0000226		2.281E-05	5.83E-03
regulation of interferon-alpha biosynthetic process	GO:0045354		5.72E-04	0.13154884
negative regulation of protein ubiquitination	GO:0031397		5.72E-04	0.11958986

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		3.325E-08	4.061E-05
neuroblast proliferation	GO:0007405		8.707E-08	7.09E-05
mitotic spindle organization	GO:0007052		1.045E-07	6.381E-05
sulfate transport	GO:0008272		1.662E-07	8.122E-05
spindle organization	GO:0007051		7.852E-07	3.197E-04
actomyosin structure organization	GO:0031032		1.054E-06	3.68E-04
inorganic anion transport	GO:0015698		5.387E-06	1.645E-03
negative regulation of protein ubiquitination	GO:0031397		2.813E-04	0.07636427
negative regulation of nucleotide biosynthetic process	GO:0030809		2.813E-04	0.06872785
positive regulation of muscle development	GO:0048636		2.813E-04	0.06247986

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		4.631E-08	5.571E-05
neuroblast proliferation	GO:0007405		1.213E-07	9.727E-05
mitotic spindle organization	GO:0007052		1.455E-07	8.754E-05
sulfate transport	GO:0008272		2.315E-07	1.114E-04
spindle organization	GO:0007051		1.094E-06	4.386E-04
actomyosin structure organization	GO:0031032		1.469E-06	5.048E-04
inorganic anion transport	GO:0015698		6.968E-06	2.096E-03
negative regulation of protein ubiquitination	GO:0031397		3.32E-04	0.08875903
negative regulation of nucleotide biosynthetic process	GO:0030809		3.32E-04	0.07988313
positive regulation of interferon-alpha biosynthetic process	GO:0045356		3.32E-04	0.07262103

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		3.325E-08	4.061E-05
neuroblast proliferation	GO:0007405		8.707E-08	7.09E-05
mitotic spindle organization	GO:0007052		1.045E-07	6.381E-05
sulfate transport	GO:0008272		1.662E-07	8.122E-05
spindle organization	GO:0007051		7.852E-07	3.197E-04
actomyosin structure organization	GO:0031032		1.054E-06	3.68E-04
inorganic anion transport	GO:0015698		5.387E-06	1.645E-03
negative regulation of protein ubiquitination	GO:0031397		2.813E-04	0.07636427
negative regulation of nucleotide biosynthetic process	GO:0030809		2.813E-04	0.06872785
positive regulation of muscle development	GO:0048636		2.813E-04	0.06247986

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		4.631E-08	5.571E-05
neuroblast proliferation	GO:0007405		1.213E-07	9.727E-05
mitotic spindle organization	GO:0007052		1.455E-07	8.754E-05
sulfate transport	GO:0008272		2.315E-07	1.114E-04
spindle organization	GO:0007051		1.094E-06	4.386E-04
actomyosin structure organization	GO:0031032		1.469E-06	5.048E-04
inorganic anion transport	GO:0015698		6.968E-06	2.096E-03
negative regulation of protein ubiquitination	GO:0031397		3.32E-04	0.08875903
negative regulation of nucleotide biosynthetic process	GO:0030809		3.32E-04	0.07988313
positive regulation of interferon-alpha biosynthetic process	GO:0045356		3.32E-04	0.07262103

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		4.631E-08	5.571E-05
neuroblast proliferation	GO:0007405		1.213E-07	9.727E-05
mitotic spindle organization	GO:0007052		1.455E-07	8.754E-05
sulfate transport	GO:0008272		2.315E-07	1.114E-04
spindle organization	GO:0007051		1.094E-06	4.386E-04
actomyosin structure organization	GO:0031032		1.469E-06	5.048E-04
inorganic anion transport	GO:0015698		6.968E-06	2.096E-03
negative regulation of protein ubiquitination	GO:0031397		3.32E-04	0.08875903
negative regulation of nucleotide biosynthetic process	GO:0030809		3.32E-04	0.07988313
positive regulation of interferon-alpha biosynthetic process	GO:0045356		3.32E-04	0.07262103

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		9.817E-08	1.129E-04
neuroblast proliferation	GO:0007405		1.374E-07	1.054E-04
sulfate transport	GO:0008272		2.945E-07	1.693E-04
mitotic spindle organization	GO:0007052		3.599E-07	1.656E-04
spindle organization	GO:0007051		2.847E-06	1.091E-03
actomyosin structure organization	GO:0031032		3.455E-06	1.135E-03
inorganic anion transport	GO:0015698		1.491E-05	4.286E-03
microtubule cytoskeleton organization	GO:0000226		2.281E-05	5.83E-03
regulation of interferon-alpha biosynthetic process	GO:0045354		5.72E-04	0.13154884
negative regulation of protein ubiquitination	GO:0031397		5.72E-04	0.11958986

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		9.817E-08	1.129E-04
neuroblast proliferation	GO:0007405		1.374E-07	1.054E-04
sulfate transport	GO:0008272		2.945E-07	1.693E-04
mitotic spindle organization	GO:0007052		3.599E-07	1.656E-04
spindle organization	GO:0007051		2.847E-06	1.091E-03
actomyosin structure organization	GO:0031032		3.455E-06	1.135E-03
inorganic anion transport	GO:0015698		1.491E-05	4.286E-03
microtubule cytoskeleton organization	GO:0000226		2.281E-05	5.83E-03
regulation of interferon-alpha biosynthetic process	GO:0045354		5.72E-04	0.13154884
negative regulation of protein ubiquitination	GO:0031397		5.72E-04	0.11958986

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
cytokinesis	GO:0000910		0E00	0E00
cytokinesis during cell cycle	GO:0033205		9.817E-08	1.129E-04
neuroblast proliferation	GO:0007405		1.374E-07	1.054E-04
sulfate transport	GO:0008272		2.945E-07	1.693E-04
mitotic spindle organization	GO:0007052		3.599E-07	1.656E-04
spindle organization	GO:0007051		2.847E-06	1.091E-03
actomyosin structure organization	GO:0031032		3.455E-06	1.135E-03
inorganic anion transport	GO:0015698		1.491E-05	4.286E-03
microtubule cytoskeleton organization	GO:0000226		2.281E-05	5.83E-03
regulation of interferon-alpha biosynthetic process	GO:0045354		5.72E-04	0.13154884
negative regulation of protein ubiquitination	GO:0031397		5.72E-04	0.11958986