Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 5692-7-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1237	1.603e-02	2.982e-02	6.294e-02
IPC-NIBC-129	0.2703	2.629e-01	1.979e-01	7.998e-01
Ivshina_GPL96-GPL97	0.2206	7.388e-03	3.689e-03	7.180e-02
Loi_GPL570	0.1369	2.654e-02	1.234e-02	1.329e-01
Loi_GPL96-GPL97	0.1883	6.931e-02	1.906e-02	6.582e-01
Pawitan_GPL96-GPL97	0.3722	7.452e-01	7.032e-01	9.970e-01
Schmidt	0.2935	3.286e-02	4.460e-02	1.806e-01
Sotiriou	0.2512	7.087e-02	5.127e-02	4.428e-01
Zhang	0.0498	3.189e-03	4.728e-03	1.513e-02

Expression data for subnetwork 5692-7-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 5692-7-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
psmd1		4	19	77	63	-0.036	0.200	0.082	0.072	0.115	0.242	0.196	0.075	-0.056
racgap1		2	35	148	138	0.181	0.240	0.218	0.126	0.242	0.313	0.238	0.255	0.234
psmd2		1	57	172	173	0.147	0.322	0.122	0.146	0.143	0.194	0.318	0.151	0.042
stip1		1	57	172	173	0.082	0.158	0.188	0.072	0.192	0.178	0.134	0.203	0.044
hspa1a		1	57	172	173	0.047	-0.046	0.070	0.019	0.160	0.108	0.121	0.110	-0.055
psmb4		1	57	172	173	-0.044	0.232	0.083	0.005	0.098	0.234	0.112	0.051	-0.028

GO Enrichment output for subnetwork 5692-7-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		2.592E-08	5.961E-05
negative regulation of ligase activity	GO:0051352		2.773E-08	3.189E-05
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.773E-08	2.126E-05
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.963E-08	1.704E-05
positive regulation of ubiquitin-protein ligase activity	GO:0051443		3.594E-08	1.653E-05
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		3.594E-08	1.378E-05
positive regulation of ligase activity	GO:0051351		4.584E-08	1.506E-05
regulation of ubiquitin-protein ligase activity	GO:0051438		5.149E-08	1.48E-05
regulation of ligase activity	GO:0051340		6.434E-08	1.644E-05
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		8.36E-08	1.923E-05
regulation of protein catabolic process	GO:0042176		2.767E-06	5.785E-04

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		3.766E-09	9.201E-06
negative regulation of ligase activity	GO:0051352		4.001E-09	4.887E-06
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		4.001E-09	3.258E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		4.247E-09	2.594E-06
positive regulation of ubiquitin-protein ligase activity	GO:0051443		5.051E-09	2.468E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		5.051E-09	2.057E-06
positive regulation of ligase activity	GO:0051351		6.639E-09	2.317E-06
regulation of ubiquitin-protein ligase activity	GO:0051438		7.369E-09	2.25E-06
regulation of ligase activity	GO:0051340		9.456E-09	2.567E-06
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.429E-08	3.491E-06
regulation of protein catabolic process	GO:0042176		6.057E-07	1.345E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		4.65E-09	1.119E-05
negative regulation of ligase activity	GO:0051352		4.939E-09	5.942E-06
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		4.939E-09	3.961E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		5.242E-09	3.153E-06
positive regulation of ubiquitin-protein ligase activity	GO:0051443		6.236E-09	3.001E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		6.236E-09	2.501E-06
positive regulation of ligase activity	GO:0051351		8.196E-09	2.817E-06
regulation of ubiquitin-protein ligase activity	GO:0051438		9.097E-09	2.736E-06
regulation of ligase activity	GO:0051340		1.167E-08	3.121E-06
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.764E-08	4.244E-06
regulation of protein catabolic process	GO:0042176		6.853E-07	1.499E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		3.766E-09	9.201E-06
negative regulation of ligase activity	GO:0051352		4.001E-09	4.887E-06
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		4.001E-09	3.258E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		4.247E-09	2.594E-06
positive regulation of ubiquitin-protein ligase activity	GO:0051443		5.051E-09	2.468E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		5.051E-09	2.057E-06
positive regulation of ligase activity	GO:0051351		6.639E-09	2.317E-06
regulation of ubiquitin-protein ligase activity	GO:0051438		7.369E-09	2.25E-06
regulation of ligase activity	GO:0051340		9.456E-09	2.567E-06
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.429E-08	3.491E-06
regulation of protein catabolic process	GO:0042176		6.057E-07	1.345E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		4.65E-09	1.119E-05
negative regulation of ligase activity	GO:0051352		4.939E-09	5.942E-06
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		4.939E-09	3.961E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		5.242E-09	3.153E-06
positive regulation of ubiquitin-protein ligase activity	GO:0051443		6.236E-09	3.001E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		6.236E-09	2.501E-06
positive regulation of ligase activity	GO:0051351		8.196E-09	2.817E-06
regulation of ubiquitin-protein ligase activity	GO:0051438		9.097E-09	2.736E-06
regulation of ligase activity	GO:0051340		1.167E-08	3.121E-06
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.764E-08	4.244E-06
regulation of protein catabolic process	GO:0042176		6.853E-07	1.499E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		4.65E-09	1.119E-05
negative regulation of ligase activity	GO:0051352		4.939E-09	5.942E-06
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		4.939E-09	3.961E-06
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		5.242E-09	3.153E-06
positive regulation of ubiquitin-protein ligase activity	GO:0051443		6.236E-09	3.001E-06
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		6.236E-09	2.501E-06
positive regulation of ligase activity	GO:0051351		8.196E-09	2.817E-06
regulation of ubiquitin-protein ligase activity	GO:0051438		9.097E-09	2.736E-06
regulation of ligase activity	GO:0051340		1.167E-08	3.121E-06
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.764E-08	4.244E-06
regulation of protein catabolic process	GO:0042176		6.853E-07	1.499E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		2.592E-08	5.961E-05
negative regulation of ligase activity	GO:0051352		2.773E-08	3.189E-05
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.773E-08	2.126E-05
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.963E-08	1.704E-05
positive regulation of ubiquitin-protein ligase activity	GO:0051443		3.594E-08	1.653E-05
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		3.594E-08	1.378E-05
positive regulation of ligase activity	GO:0051351		4.584E-08	1.506E-05
regulation of ubiquitin-protein ligase activity	GO:0051438		5.149E-08	1.48E-05
regulation of ligase activity	GO:0051340		6.434E-08	1.644E-05
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		8.36E-08	1.923E-05
regulation of protein catabolic process	GO:0042176		2.767E-06	5.785E-04

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		2.592E-08	5.961E-05
negative regulation of ligase activity	GO:0051352		2.773E-08	3.189E-05
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.773E-08	2.126E-05
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.963E-08	1.704E-05
positive regulation of ubiquitin-protein ligase activity	GO:0051443		3.594E-08	1.653E-05
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		3.594E-08	1.378E-05
positive regulation of ligase activity	GO:0051351		4.584E-08	1.506E-05
regulation of ubiquitin-protein ligase activity	GO:0051438		5.149E-08	1.48E-05
regulation of ligase activity	GO:0051340		6.434E-08	1.644E-05
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		8.36E-08	1.923E-05
regulation of protein catabolic process	GO:0042176		2.767E-06	5.785E-04

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051436		2.592E-08	5.961E-05
negative regulation of ligase activity	GO:0051352		2.773E-08	3.189E-05
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.773E-08	2.126E-05
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.963E-08	1.704E-05
positive regulation of ubiquitin-protein ligase activity	GO:0051443		3.594E-08	1.653E-05
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		3.594E-08	1.378E-05
positive regulation of ligase activity	GO:0051351		4.584E-08	1.506E-05
regulation of ubiquitin-protein ligase activity	GO:0051438		5.149E-08	1.48E-05
regulation of ligase activity	GO:0051340		6.434E-08	1.644E-05
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		8.36E-08	1.923E-05
regulation of protein catabolic process	GO:0042176		2.767E-06	5.785E-04