Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 55143-6-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1770 | 9.767e-03 | 1.918e-02 | 3.985e-02 |
|---|
| IPC-NIBC-129 | 0.1352 | 8.708e-02 | 5.244e-02 | 3.577e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2443 | 1.101e-01 | 9.303e-02 | 6.753e-01 |
|---|
| Loi_GPL570 | 0.2284 | 1.117e-01 | 8.680e-02 | 4.236e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2374 | 1.102e-02 | 1.210e-04 | 1.158e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.2762 | 2.147e-01 | 1.319e-01 | 7.399e-01 |
|---|
| Schmidt | 0.1911 | 1.481e-02 | 2.068e-02 | 8.312e-02 |
|---|
| Sotiriou | 0.3016 | 3.068e-02 | 2.143e-02 | 2.253e-01 |
|---|
| Zhang | 0.1810 | 1.577e-02 | 2.337e-02 | 5.973e-02 |
|---|
Expression data for subnetwork 55143-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 55143-6-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| cdc2 |   | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| cdca8 | | 1 | 57 | 164 | 165 | 0.032 | 0.180 | 0.107 | 0.200 | 0.124 | 0.158 | 0.248 | 0.123 | 0.049 |
|---|
| krt18 | | 5 | 13 | 46 | 37 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | -0.114 |
|---|
| birc5 | | 8 | 11 | 37 | 28 | 0.101 | 0.216 | 0.190 | 0.134 | 0.223 | 0.202 | 0.236 | 0.241 | 0.205 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 55143-6-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 |  | 1.889E-06 | 4.344E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 3.551E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 3.987E-05 | 8.336E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.755E-07 | 6.731E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.495E-06 | 1.826E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.495E-06 | 1.217E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.495E-06 | 9.13E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 1.495E-06 | 7.304E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.993E-06 | 8.114E-04 |
|---|
| establishment of chromosome localization | GO:0051303 | | 1.993E-06 | 6.955E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.405E-06 | 7.344E-04 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 4.695E-06 | 1.274E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 6.471E-06 | 1.581E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 9.667E-06 | 2.147E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.524E-07 | 1.088E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 2.505E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.67E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.082E-06 | 1.252E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 2.775E-06 | 9.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.08E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.054E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 6.537E-06 | 1.573E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 9.011E-06 | 1.971E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.755E-07 | 6.731E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.495E-06 | 1.826E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.495E-06 | 1.217E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.495E-06 | 9.13E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 1.495E-06 | 7.304E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.993E-06 | 8.114E-04 |
|---|
| establishment of chromosome localization | GO:0051303 | | 1.993E-06 | 6.955E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.405E-06 | 7.344E-04 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 4.695E-06 | 1.274E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 6.471E-06 | 1.581E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 9.667E-06 | 2.147E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.524E-07 | 1.088E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 2.505E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.67E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.082E-06 | 1.252E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 2.775E-06 | 9.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.08E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.054E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 6.537E-06 | 1.573E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 9.011E-06 | 1.971E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.524E-07 | 1.088E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 2.505E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.67E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.082E-06 | 1.252E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 2.775E-06 | 9.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.08E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.054E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 6.537E-06 | 1.573E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 9.011E-06 | 1.971E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.889E-06 | 4.344E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 3.551E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 3.987E-05 | 8.336E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.889E-06 | 4.344E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 3.551E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 3.987E-05 | 8.336E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.889E-06 | 4.344E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 3.551E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 3.987E-05 | 8.336E-03 |
|---|
