Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5422-6-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1005 | 1.519e-02 | 2.843e-02 | 5.993e-02 |
|---|
| IPC-NIBC-129 | 0.2304 | 1.066e-01 | 6.682e-02 | 4.300e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2231 | 1.663e-02 | 9.816e-03 | 1.636e-01 |
|---|
| Loi_GPL570 | 0.2120 | 9.763e-02 | 7.263e-02 | 3.849e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2010 | 1.446e-01 | 1.075e-01 | 8.950e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3646 | 7.975e-02 | 3.389e-02 | 4.118e-01 |
|---|
| Schmidt | 0.2009 | 3.617e-02 | 4.891e-02 | 1.972e-01 |
|---|
| Sotiriou | 0.2451 | 5.712e-02 | 4.092e-02 | 3.776e-01 |
|---|
| Zhang | 0.2738 | 3.626e-03 | 5.381e-03 | 1.693e-02 |
|---|
Expression data for subnetwork 5422-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 5422-6-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| cdkn3 |   | 12 | 5 | 31 | 16 | 0.114 | 0.269 | 0.199 | 0.136 | 0.193 | 0.323 | 0.186 | 0.198 | 0.271 |
|---|
| mcm6 | | 1 | 57 | 113 | 117 | 0.021 | 0.271 | 0.148 | 0.061 | 0.121 | 0.320 | 0.258 | 0.144 | 0.084 |
|---|
| pola1 | | 1 | 57 | 113 | 117 | -0.096 | 0.039 | 0.055 | 0.080 | 0.080 | 0.051 | 0.065 | 0.035 | 0.054 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| cdc45l | | 2 | 35 | 113 | 108 | -0.014 | 0.244 | 0.143 | 0.181 | 0.118 | 0.227 | 0.262 | 0.050 | 0.189 |
|---|
| ccnb1 | | 25 | 3 | 46 | 33 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.167 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 5422-6-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 |  | 9.792E-11 | 2.252E-07 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.33E-10 | 7.279E-07 |
|---|
| interphase | GO:0051325 | | 7.117E-10 | 5.456E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 6.59E-09 | 3.789E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 7.56E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 1.061E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.767E-06 | 1.566E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.008E-06 | 1.44E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.779E-06 | 1.477E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.779E-06 | 1.329E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 1.291E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 1.952E-11 | 4.769E-08 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.817E-10 | 2.22E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 2.883E-09 | 2.348E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 5.749E-07 | 3.511E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.106E-06 | 5.402E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.889E-06 | 7.692E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.975E-06 | 6.891E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.246E-06 | 6.86E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.246E-06 | 6.097E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.752E-06 | 6.724E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.974E-06 | 6.605E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 1.749E-11 | 4.207E-08 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.278E-10 | 1.537E-07 |
|---|
| interphase | GO:0051325 | | 1.497E-10 | 1.2E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 2.023E-09 | 1.217E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 5.455E-07 | 2.625E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 4.207E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.793E-06 | 6.163E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.874E-06 | 5.637E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.132E-06 | 5.7E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.132E-06 | 5.13E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.612E-06 | 5.714E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 1.952E-11 | 4.769E-08 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.817E-10 | 2.22E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 2.883E-09 | 2.348E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 5.749E-07 | 3.511E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.106E-06 | 5.402E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.889E-06 | 7.692E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.975E-06 | 6.891E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.246E-06 | 6.86E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.246E-06 | 6.097E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.752E-06 | 6.724E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.974E-06 | 6.605E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 1.749E-11 | 4.207E-08 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.278E-10 | 1.537E-07 |
|---|
| interphase | GO:0051325 | | 1.497E-10 | 1.2E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 2.023E-09 | 1.217E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 5.455E-07 | 2.625E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 4.207E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.793E-06 | 6.163E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.874E-06 | 5.637E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.132E-06 | 5.7E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.132E-06 | 5.13E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.612E-06 | 5.714E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 1.749E-11 | 4.207E-08 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.278E-10 | 1.537E-07 |
|---|
| interphase | GO:0051325 | | 1.497E-10 | 1.2E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 2.023E-09 | 1.217E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 5.455E-07 | 2.625E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 4.207E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.793E-06 | 6.163E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.874E-06 | 5.637E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.132E-06 | 5.7E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.132E-06 | 5.13E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.612E-06 | 5.714E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 9.792E-11 | 2.252E-07 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.33E-10 | 7.279E-07 |
|---|
| interphase | GO:0051325 | | 7.117E-10 | 5.456E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 6.59E-09 | 3.789E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 7.56E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 1.061E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.767E-06 | 1.566E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.008E-06 | 1.44E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.779E-06 | 1.477E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.779E-06 | 1.329E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 1.291E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 9.792E-11 | 2.252E-07 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.33E-10 | 7.279E-07 |
|---|
| interphase | GO:0051325 | | 7.117E-10 | 5.456E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 6.59E-09 | 3.789E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 7.56E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 1.061E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.767E-06 | 1.566E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.008E-06 | 1.44E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.779E-06 | 1.477E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.779E-06 | 1.329E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 1.291E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| DNA replication initiation | GO:0006270 | | 9.792E-11 | 2.252E-07 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.33E-10 | 7.279E-07 |
|---|
| interphase | GO:0051325 | | 7.117E-10 | 5.456E-07 |
|---|
| DNA-dependent DNA replication | GO:0006261 | | 6.59E-09 | 3.789E-06 |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 7.56E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 1.061E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.767E-06 | 1.566E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 5.008E-06 | 1.44E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 5.779E-06 | 1.477E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 5.779E-06 | 1.329E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 1.291E-03 |
|---|
