Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 4869-5-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1461	1.190e-02	2.287e-02	4.787e-02
IPC-NIBC-129	0.1681	5.600e-02	3.089e-02	2.288e-01
Ivshina_GPL96-GPL97	0.2349	5.784e-02	4.355e-02	4.596e-01
Loi_GPL570	0.2638	2.623e-01	2.606e-01	7.143e-01
Loi_GPL96-GPL97	0.2499	3.267e-02	2.646e-03	3.770e-01
Pawitan_GPL96-GPL97	0.3346	1.026e-01	4.795e-02	4.891e-01
Schmidt	0.1272	1.297e-02	1.819e-02	7.254e-02
Sotiriou	0.3099	2.473e-02	1.714e-02	1.852e-01
Zhang	0.2506	5.983e-03	8.895e-03	2.615e-02

Expression data for subnetwork 4869-5-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 4869-5-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
cdc2		83	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.297
ccnb1		25	3	46	33	0.082	0.246	0.212	0.224	0.256	0.351	0.129	0.249	0.167
npm1		1	57	93	95	-0.005	0.172	0.085	0.197	0.093	-0.050	0.065	0.169	-0.086
ccnd1		76	2	1	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.144

GO Enrichment output for subnetwork 4869-5-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.619E-13	3.724E-10
ribosome assembly	GO:0042255		1.067E-11	1.227E-08
centrosome cycle	GO:0007098		4.41E-11	3.381E-08
cell aging	GO:0007569		1.931E-10	1.11E-07
microtubule organizing center organization	GO:0031023		2.359E-10	1.085E-07
regulation of microtubule cytoskeleton organization	GO:0070507		4.817E-10	1.847E-07
positive regulation of NF-kappaB transcription factor activity	GO:0051092		8.823E-10	2.899E-07
regulation of microtubule-based process	GO:0032886		8.823E-10	2.537E-07
positive regulation of transcription factor activity	GO:0051091		1.894E-09	4.84E-07
positive regulation of DNA binding	GO:0043388		3.252E-09	7.48E-07
positive regulation of binding	GO:0051099		3.961E-09	8.283E-07

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.579E-14	3.857E-11
ribosome assembly	GO:0042255		3.157E-12	3.856E-09
centrosome cycle	GO:0007098		9.646E-12	7.855E-09
cell aging	GO:0007569		2.305E-11	1.408E-08
microtubule organizing center organization	GO:0031023		4.707E-11	2.3E-08
regulation of microtubule cytoskeleton organization	GO:0070507		9.901E-11	4.031E-08
positive regulation of NF-kappaB transcription factor activity	GO:0051092		1.131E-10	3.949E-08
regulation of microtubule-based process	GO:0032886		2.077E-10	6.341E-08
positive regulation of transcription factor activity	GO:0051091		3.877E-10	1.052E-07
positive regulation of DNA binding	GO:0043388		6.109E-10	1.492E-07
positive regulation of binding	GO:0051099		8.495E-10	1.887E-07

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		3.063E-14	7.37E-11
ribosome assembly	GO:0042255		4.375E-12	5.263E-09
centrosome cycle	GO:0007098		1.871E-11	1.5E-08
cell aging	GO:0007569		3.657E-11	2.2E-08
microtubule organizing center organization	GO:0031023		9.128E-11	4.393E-08
regulation of microtubule cytoskeleton organization	GO:0070507		1.45E-10	5.813E-08
positive regulation of NF-kappaB transcription factor activity	GO:0051092		2.194E-10	7.54E-08
regulation of microtubule-based process	GO:0032886		3.192E-10	9.601E-08
positive regulation of transcription factor activity	GO:0051091		6.817E-10	1.822E-07
positive regulation of DNA binding	GO:0043388		1.085E-09	2.612E-07
ribonucleoprotein complex assembly	GO:0022618		1.289E-09	2.819E-07

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.579E-14	3.857E-11
ribosome assembly	GO:0042255		3.157E-12	3.856E-09
centrosome cycle	GO:0007098		9.646E-12	7.855E-09
cell aging	GO:0007569		2.305E-11	1.408E-08
microtubule organizing center organization	GO:0031023		4.707E-11	2.3E-08
regulation of microtubule cytoskeleton organization	GO:0070507		9.901E-11	4.031E-08
positive regulation of NF-kappaB transcription factor activity	GO:0051092		1.131E-10	3.949E-08
regulation of microtubule-based process	GO:0032886		2.077E-10	6.341E-08
positive regulation of transcription factor activity	GO:0051091		3.877E-10	1.052E-07
positive regulation of DNA binding	GO:0043388		6.109E-10	1.492E-07
positive regulation of binding	GO:0051099		8.495E-10	1.887E-07

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		3.063E-14	7.37E-11
ribosome assembly	GO:0042255		4.375E-12	5.263E-09
centrosome cycle	GO:0007098		1.871E-11	1.5E-08
cell aging	GO:0007569		3.657E-11	2.2E-08
microtubule organizing center organization	GO:0031023		9.128E-11	4.393E-08
regulation of microtubule cytoskeleton organization	GO:0070507		1.45E-10	5.813E-08
positive regulation of NF-kappaB transcription factor activity	GO:0051092		2.194E-10	7.54E-08
regulation of microtubule-based process	GO:0032886		3.192E-10	9.601E-08
positive regulation of transcription factor activity	GO:0051091		6.817E-10	1.822E-07
positive regulation of DNA binding	GO:0043388		1.085E-09	2.612E-07
ribonucleoprotein complex assembly	GO:0022618		1.289E-09	2.819E-07

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		3.063E-14	7.37E-11
ribosome assembly	GO:0042255		4.375E-12	5.263E-09
centrosome cycle	GO:0007098		1.871E-11	1.5E-08
cell aging	GO:0007569		3.657E-11	2.2E-08
microtubule organizing center organization	GO:0031023		9.128E-11	4.393E-08
regulation of microtubule cytoskeleton organization	GO:0070507		1.45E-10	5.813E-08
positive regulation of NF-kappaB transcription factor activity	GO:0051092		2.194E-10	7.54E-08
regulation of microtubule-based process	GO:0032886		3.192E-10	9.601E-08
positive regulation of transcription factor activity	GO:0051091		6.817E-10	1.822E-07
positive regulation of DNA binding	GO:0043388		1.085E-09	2.612E-07
ribonucleoprotein complex assembly	GO:0022618		1.289E-09	2.819E-07

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.619E-13	3.724E-10
ribosome assembly	GO:0042255		1.067E-11	1.227E-08
centrosome cycle	GO:0007098		4.41E-11	3.381E-08
cell aging	GO:0007569		1.931E-10	1.11E-07
microtubule organizing center organization	GO:0031023		2.359E-10	1.085E-07
regulation of microtubule cytoskeleton organization	GO:0070507		4.817E-10	1.847E-07
positive regulation of NF-kappaB transcription factor activity	GO:0051092		8.823E-10	2.899E-07
regulation of microtubule-based process	GO:0032886		8.823E-10	2.537E-07
positive regulation of transcription factor activity	GO:0051091		1.894E-09	4.84E-07
positive regulation of DNA binding	GO:0043388		3.252E-09	7.48E-07
positive regulation of binding	GO:0051099		3.961E-09	8.283E-07

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.619E-13	3.724E-10
ribosome assembly	GO:0042255		1.067E-11	1.227E-08
centrosome cycle	GO:0007098		4.41E-11	3.381E-08
cell aging	GO:0007569		1.931E-10	1.11E-07
microtubule organizing center organization	GO:0031023		2.359E-10	1.085E-07
regulation of microtubule cytoskeleton organization	GO:0070507		4.817E-10	1.847E-07
positive regulation of NF-kappaB transcription factor activity	GO:0051092		8.823E-10	2.899E-07
regulation of microtubule-based process	GO:0032886		8.823E-10	2.537E-07
positive regulation of transcription factor activity	GO:0051091		1.894E-09	4.84E-07
positive regulation of DNA binding	GO:0043388		3.252E-09	7.48E-07
positive regulation of binding	GO:0051099		3.961E-09	8.283E-07

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of centrosome cycle	GO:0046605		1.619E-13	3.724E-10
ribosome assembly	GO:0042255		1.067E-11	1.227E-08
centrosome cycle	GO:0007098		4.41E-11	3.381E-08
cell aging	GO:0007569		1.931E-10	1.11E-07
microtubule organizing center organization	GO:0031023		2.359E-10	1.085E-07
regulation of microtubule cytoskeleton organization	GO:0070507		4.817E-10	1.847E-07
positive regulation of NF-kappaB transcription factor activity	GO:0051092		8.823E-10	2.899E-07
regulation of microtubule-based process	GO:0032886		8.823E-10	2.537E-07
positive regulation of transcription factor activity	GO:0051091		1.894E-09	4.84E-07
positive regulation of DNA binding	GO:0043388		3.252E-09	7.48E-07
positive regulation of binding	GO:0051099		3.961E-09	8.283E-07