Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 3875-4-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1420 | 7.101e-03 | 1.442e-02 | 2.954e-02 |
|---|
| IPC-NIBC-129 | 0.2097 | 9.069e-02 | 5.506e-02 | 3.716e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2596 | 2.524e-02 | 1.620e-02 | 2.396e-01 |
|---|
| Loi_GPL570 | 0.2251 | 2.208e-01 | 2.100e-01 | 6.522e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2829 | 3.766e-02 | 3.889e-03 | 4.265e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3212 | 2.995e-01 | 2.077e-01 | 8.461e-01 |
|---|
| Schmidt | 0.1404 | 2.432e-02 | 3.338e-02 | 1.360e-01 |
|---|
| Sotiriou | 0.2703 | 1.392e-02 | 9.468e-03 | 1.057e-01 |
|---|
| Zhang | 0.1484 | 7.483e-03 | 1.112e-02 | 3.170e-02 |
|---|
Expression data for subnetwork 3875-4-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 3875-4-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| cdc2 |   | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| krt18 | | 5 | 13 | 46 | 37 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | -0.114 |
|---|
| ccnb1 | | 25 | 3 | 46 | 33 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.167 |
|---|
GO Enrichment output for subnetwork 3875-4-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 |  | 4.022E-07 | 9.251E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 4.226E-07 | 4.86E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.88E-07 | 3.741E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.88E-07 | 2.806E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.852E-07 | 2.692E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 6.382E-07 | 2.447E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 7.538E-07 | 2.477E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 9.167E-07 | 2.636E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.995E-06 | 2.554E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.371E-05 | 3.154E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 9.309E-05 | 0.01946532 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.334E-07 | 3.259E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.394E-07 | 1.703E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.587E-07 | 1.292E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.587E-07 | 9.692E-05 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.946E-07 | 9.507E-05 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.103E-07 | 8.564E-05 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.533E-07 | 8.842E-05 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.448E-07 | 1.053E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.985E-07 | 1.353E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 4.985E-07 | 1.218E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 6.543E-06 | 1.453E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.191E-07 | 5.272E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.29E-07 | 2.755E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.607E-07 | 2.091E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.607E-07 | 1.568E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.196E-07 | 1.538E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.454E-07 | 1.385E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.161E-07 | 1.43E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.663E-07 | 1.703E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.856E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 1.67E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 1.993E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.334E-07 | 3.259E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.394E-07 | 1.703E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.587E-07 | 1.292E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.587E-07 | 9.692E-05 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.946E-07 | 9.507E-05 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.103E-07 | 8.564E-05 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.533E-07 | 8.842E-05 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.448E-07 | 1.053E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.985E-07 | 1.353E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 4.985E-07 | 1.218E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 6.543E-06 | 1.453E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.191E-07 | 5.272E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.29E-07 | 2.755E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.607E-07 | 2.091E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.607E-07 | 1.568E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.196E-07 | 1.538E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.454E-07 | 1.385E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.161E-07 | 1.43E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.663E-07 | 1.703E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.856E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 1.67E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 1.993E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.191E-07 | 5.272E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.29E-07 | 2.755E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.607E-07 | 2.091E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.607E-07 | 1.568E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.196E-07 | 1.538E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.454E-07 | 1.385E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.161E-07 | 1.43E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.663E-07 | 1.703E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 6.943E-07 | 1.856E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 6.943E-07 | 1.67E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.111E-06 | 1.993E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.022E-07 | 9.251E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 4.226E-07 | 4.86E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.88E-07 | 3.741E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.88E-07 | 2.806E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.852E-07 | 2.692E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 6.382E-07 | 2.447E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 7.538E-07 | 2.477E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 9.167E-07 | 2.636E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.995E-06 | 2.554E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.371E-05 | 3.154E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 9.309E-05 | 0.01946532 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.022E-07 | 9.251E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 4.226E-07 | 4.86E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.88E-07 | 3.741E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.88E-07 | 2.806E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.852E-07 | 2.692E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 6.382E-07 | 2.447E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 7.538E-07 | 2.477E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 9.167E-07 | 2.636E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.995E-06 | 2.554E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.371E-05 | 3.154E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 9.309E-05 | 0.01946532 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 4.022E-07 | 9.251E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 4.226E-07 | 4.86E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 4.88E-07 | 3.741E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 4.88E-07 | 2.806E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 5.852E-07 | 2.692E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 6.382E-07 | 2.447E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 7.538E-07 | 2.477E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 9.167E-07 | 2.636E-04 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 9.995E-06 | 2.554E-03 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.371E-05 | 3.154E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 9.309E-05 | 0.01946532 |
|---|
