Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 2125-2-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1586	3.215e-02	5.533e-02	1.172e-01
IPC-NIBC-129	0.2005	8.623e-02	5.183e-02	3.544e-01
Ivshina_GPL96-GPL97	0.1869	3.039e-02	2.022e-02	2.808e-01
Loi_GPL570	0.2292	6.967e-02	4.620e-02	2.984e-01
Loi_GPL96-GPL97	0.1673	2.120e-02	7.970e-04	2.473e-01
Pawitan_GPL96-GPL97	0.3226	1.420e-01	7.490e-02	5.973e-01
Schmidt	0.2252	1.839e-02	2.550e-02	1.034e-01
Sotiriou	0.2880	1.006e-01	7.411e-02	5.594e-01
Zhang	0.2203	7.300e-03	1.085e-02	3.103e-02

Expression data for subnetwork 2125-2-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 2125-2-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
sp1		14	4	11	6	0.054	0.186	0.147	0.242	0.125	0.202	0.284	0.227	0.091
pcna		9	7	56	42	0.096	0.202	0.109	0.180	0.118	0.256	0.151	0.059	0.123
msh6		1	57	146	149	0.123	0.241	0.000	-0.042	0.108	0.202	0.171	0.178	0.095
cdc2		83	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.297
evpl		1	57	146	149	-0.053	0.079	0.064	-0.126	0.090	0.176	0.192	0.157	0.046
slc25a5		5	13	29	20	0.053	0.214	0.106	0.218	0.115	0.221	0.177	0.141	-0.019
ccnd1		76	2	1	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.144

GO Enrichment output for subnetwork 2125-2-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		1.574E-06	3.619E-03
positive regulation of cell cycle	GO:0045787		4.477E-06	5.148E-03
response to UV	GO:0009411		4.787E-06	3.67E-03
plasminogen activation	GO:0031639		5.098E-06	2.931E-03
determination of adult lifespan	GO:0008340		5.098E-06	2.345E-03
regulation of helicase activity	GO:0051095		7.644E-06	2.93E-03
negative regulation of DNA recombination	GO:0045910		7.644E-06	2.512E-03
positive regulation of fibrinolysis	GO:0051919		7.644E-06	2.198E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.07E-05	2.734E-03
somatic diversification of immune receptors via somatic mutation	GO:0002566		1.07E-05	2.46E-03
multicellular organismal aging	GO:0010259		1.07E-05	2.237E-03

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		3.2E-07	7.818E-04
positive regulation of cell cycle	GO:0045787		6.547E-07	7.998E-04
response to UV	GO:0009411		9.917E-07	8.076E-04
positive regulation of helicase activity	GO:0051096		1.234E-06	7.537E-04
meiotic chromosome segregation	GO:0045132		1.234E-06	6.03E-04
establishment of spindle localization	GO:0051293		1.851E-06	7.535E-04
plasminogen activation	GO:0031639		1.851E-06	6.459E-04
determination of adult lifespan	GO:0008340		1.851E-06	5.652E-04
regulation of helicase activity	GO:0051095		2.59E-06	7.032E-04
negative regulation of DNA recombination	GO:0045910		2.59E-06	6.328E-04
positive regulation of fibrinolysis	GO:0051919		2.59E-06	5.753E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		4.84E-07	1.165E-03
positive regulation of cell cycle	GO:0045787		1.074E-06	1.293E-03
response to UV	GO:0009411		1.453E-06	1.166E-03
positive regulation of helicase activity	GO:0051096		1.719E-06	1.034E-03
meiotic chromosome segregation	GO:0045132		1.719E-06	8.27E-04
plasminogen activation	GO:0031639		1.719E-06	6.892E-04
establishment of spindle localization	GO:0051293		2.577E-06	8.859E-04
determination of adult lifespan	GO:0008340		2.577E-06	7.752E-04
positive regulation of fibrinolysis	GO:0051919		2.577E-06	6.89E-04
regulation of helicase activity	GO:0051095		3.607E-06	8.68E-04
negative regulation of DNA recombination	GO:0045910		3.607E-06	7.891E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		3.2E-07	7.818E-04
positive regulation of cell cycle	GO:0045787		6.547E-07	7.998E-04
response to UV	GO:0009411		9.917E-07	8.076E-04
positive regulation of helicase activity	GO:0051096		1.234E-06	7.537E-04
meiotic chromosome segregation	GO:0045132		1.234E-06	6.03E-04
establishment of spindle localization	GO:0051293		1.851E-06	7.535E-04
plasminogen activation	GO:0031639		1.851E-06	6.459E-04
determination of adult lifespan	GO:0008340		1.851E-06	5.652E-04
regulation of helicase activity	GO:0051095		2.59E-06	7.032E-04
negative regulation of DNA recombination	GO:0045910		2.59E-06	6.328E-04
positive regulation of fibrinolysis	GO:0051919		2.59E-06	5.753E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		4.84E-07	1.165E-03
positive regulation of cell cycle	GO:0045787		1.074E-06	1.293E-03
response to UV	GO:0009411		1.453E-06	1.166E-03
positive regulation of helicase activity	GO:0051096		1.719E-06	1.034E-03
meiotic chromosome segregation	GO:0045132		1.719E-06	8.27E-04
plasminogen activation	GO:0031639		1.719E-06	6.892E-04
establishment of spindle localization	GO:0051293		2.577E-06	8.859E-04
determination of adult lifespan	GO:0008340		2.577E-06	7.752E-04
positive regulation of fibrinolysis	GO:0051919		2.577E-06	6.89E-04
regulation of helicase activity	GO:0051095		3.607E-06	8.68E-04
negative regulation of DNA recombination	GO:0045910		3.607E-06	7.891E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		4.84E-07	1.165E-03
positive regulation of cell cycle	GO:0045787		1.074E-06	1.293E-03
response to UV	GO:0009411		1.453E-06	1.166E-03
positive regulation of helicase activity	GO:0051096		1.719E-06	1.034E-03
meiotic chromosome segregation	GO:0045132		1.719E-06	8.27E-04
plasminogen activation	GO:0031639		1.719E-06	6.892E-04
establishment of spindle localization	GO:0051293		2.577E-06	8.859E-04
determination of adult lifespan	GO:0008340		2.577E-06	7.752E-04
positive regulation of fibrinolysis	GO:0051919		2.577E-06	6.89E-04
regulation of helicase activity	GO:0051095		3.607E-06	8.68E-04
negative regulation of DNA recombination	GO:0045910		3.607E-06	7.891E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		1.574E-06	3.619E-03
positive regulation of cell cycle	GO:0045787		4.477E-06	5.148E-03
response to UV	GO:0009411		4.787E-06	3.67E-03
plasminogen activation	GO:0031639		5.098E-06	2.931E-03
determination of adult lifespan	GO:0008340		5.098E-06	2.345E-03
regulation of helicase activity	GO:0051095		7.644E-06	2.93E-03
negative regulation of DNA recombination	GO:0045910		7.644E-06	2.512E-03
positive regulation of fibrinolysis	GO:0051919		7.644E-06	2.198E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.07E-05	2.734E-03
somatic diversification of immune receptors via somatic mutation	GO:0002566		1.07E-05	2.46E-03
multicellular organismal aging	GO:0010259		1.07E-05	2.237E-03

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		1.574E-06	3.619E-03
positive regulation of cell cycle	GO:0045787		4.477E-06	5.148E-03
response to UV	GO:0009411		4.787E-06	3.67E-03
plasminogen activation	GO:0031639		5.098E-06	2.931E-03
determination of adult lifespan	GO:0008340		5.098E-06	2.345E-03
regulation of helicase activity	GO:0051095		7.644E-06	2.93E-03
negative regulation of DNA recombination	GO:0045910		7.644E-06	2.512E-03
positive regulation of fibrinolysis	GO:0051919		7.644E-06	2.198E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.07E-05	2.734E-03
somatic diversification of immune receptors via somatic mutation	GO:0002566		1.07E-05	2.46E-03
multicellular organismal aging	GO:0010259		1.07E-05	2.237E-03

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
meiosis I	GO:0007127		1.574E-06	3.619E-03
positive regulation of cell cycle	GO:0045787		4.477E-06	5.148E-03
response to UV	GO:0009411		4.787E-06	3.67E-03
plasminogen activation	GO:0031639		5.098E-06	2.931E-03
determination of adult lifespan	GO:0008340		5.098E-06	2.345E-03
regulation of helicase activity	GO:0051095		7.644E-06	2.93E-03
negative regulation of DNA recombination	GO:0045910		7.644E-06	2.512E-03
positive regulation of fibrinolysis	GO:0051919		7.644E-06	2.198E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.07E-05	2.734E-03
somatic diversification of immune receptors via somatic mutation	GO:0002566		1.07E-05	2.46E-03
multicellular organismal aging	GO:0010259		1.07E-05	2.237E-03