Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 2017-2-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1425 | 6.923e-03 | 1.410e-02 | 2.884e-02 |
|---|
| IPC-NIBC-129 | 0.1278 | 1.953e-01 | 1.384e-01 | 6.793e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2608 | 1.268e-01 | 1.098e-01 | 7.229e-01 |
|---|
| Loi_GPL570 | 0.1620 | 5.635e-02 | 3.467e-02 | 2.522e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1492 | 3.697e-02 | 3.701e-03 | 4.199e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3655 | 2.223e-01 | 1.383e-01 | 7.517e-01 |
|---|
| Schmidt | 0.2404 | 3.727e-02 | 5.033e-02 | 2.026e-01 |
|---|
| Sotiriou | 0.2432 | 1.355e-01 | 1.015e-01 | 6.636e-01 |
|---|
| Zhang | 0.1776 | 3.572e-03 | 5.300e-03 | 1.671e-02 |
|---|
Expression data for subnetwork 2017-2-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 2017-2-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| nckipsd |   | 2 | 35 | 176 | 166 | 0.094 | 0.086 | 0.221 | -0.049 | 0.109 | 0.121 | 0.006 | 0.126 | 0.054 |
|---|
| mars | | 1 | 57 | 176 | 177 | 0.114 | 0.207 | 0.114 | 0.083 | 0.198 | 0.340 | 0.139 | 0.180 | 0.129 |
|---|
| cttn | | 3 | 25 | 160 | 147 | 0.067 | 0.065 | 0.123 | 0.238 | 0.126 | 0.216 | 0.069 | 0.115 | 0.025 |
|---|
| mapk14 | | 1 | 57 | 176 | 177 | -0.062 | 0.058 | 0.135 | 0.204 | 0.086 | 0.068 | 0.246 | 0.068 | 0.011 |
|---|
| grb2 | | 3 | 25 | 160 | 147 | 0.084 | -0.013 | 0.086 | -0.031 | 0.162 | 0.065 | 0.158 | 0.127 | 0.194 |
|---|
GO Enrichment output for subnetwork 2017-2-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 |  | 1.789E-07 | 4.114E-04 |
|---|
| protein import into nucleus | GO:0006606 | | 2.02E-05 | 0.02322793 |
|---|
| nuclear import | GO:0051170 | | 2.103E-05 | 0.01612358 |
|---|
| protein localization in nucleus | GO:0034504 | | 2.553E-05 | 0.01468201 |
|---|
| protein import | GO:0017038 | | 4.835E-05 | 0.02224079 |
|---|
| Ras protein signal transduction | GO:0007265 | | 4.982E-05 | 0.01909899 |
|---|
| protein localization in organelle | GO:0033365 | | 4.982E-05 | 0.01637057 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.396E-04 | 0.04013334 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.642E-04 | 0.04197229 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.826E-04 | 0.06498711 |
|---|
| amino acid activation | GO:0043038 | | 3.35E-04 | 0.07004858 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 3.394E-08 | 8.291E-05 |
|---|
| protein import into nucleus | GO:0006606 | | 5.278E-06 | 6.447E-03 |
|---|
| nuclear import | GO:0051170 | | 5.474E-06 | 4.458E-03 |
|---|
| neuropeptide signaling pathway | GO:0007218 | | 6.309E-06 | 3.853E-03 |
|---|
| protein localization in nucleus | GO:0034504 | | 6.756E-06 | 3.301E-03 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 5.799E-05 | 0.02361189 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 6.244E-05 | 0.02179028 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 1.158E-04 | 0.03537329 |
|---|
| receptor-mediated endocytosis | GO:0006898 | | 1.628E-04 | 0.04420402 |
|---|
| response to insulin stimulus | GO:0032868 | | 1.777E-04 | 0.04341932 |
|---|
| amino acid activation | GO:0043038 | | 2.177E-04 | 0.04835917 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 5.575E-08 | 1.341E-04 |
|---|
| neuropeptide signaling pathway | GO:0007218 | | 7.151E-06 | 8.603E-03 |
|---|
| protein import into nucleus | GO:0006606 | | 8.025E-06 | 6.436E-03 |
|---|
| nuclear import | GO:0051170 | | 8.331E-06 | 5.011E-03 |
|---|
| protein localization in nucleus | GO:0034504 | | 1.033E-05 | 4.971E-03 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 7.473E-05 | 0.02996666 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.068E-05 | 0.02773259 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 1.527E-04 | 0.04591091 |
|---|
| receptor-mediated endocytosis | GO:0006898 | | 2.066E-04 | 0.05523664 |
|---|
| response to insulin stimulus | GO:0032868 | | 2.366E-04 | 0.05693083 |
|---|
| amino acid activation | GO:0043038 | | 3.026E-04 | 0.06619244 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 3.394E-08 | 8.291E-05 |
|---|
| protein import into nucleus | GO:0006606 | | 5.278E-06 | 6.447E-03 |
|---|
| nuclear import | GO:0051170 | | 5.474E-06 | 4.458E-03 |
|---|
| neuropeptide signaling pathway | GO:0007218 | | 6.309E-06 | 3.853E-03 |
|---|
| protein localization in nucleus | GO:0034504 | | 6.756E-06 | 3.301E-03 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 5.799E-05 | 0.02361189 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 6.244E-05 | 0.02179028 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 1.158E-04 | 0.03537329 |
|---|
| receptor-mediated endocytosis | GO:0006898 | | 1.628E-04 | 0.04420402 |
|---|
| response to insulin stimulus | GO:0032868 | | 1.777E-04 | 0.04341932 |
|---|
| amino acid activation | GO:0043038 | | 2.177E-04 | 0.04835917 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 5.575E-08 | 1.341E-04 |
|---|
| neuropeptide signaling pathway | GO:0007218 | | 7.151E-06 | 8.603E-03 |
|---|
| protein import into nucleus | GO:0006606 | | 8.025E-06 | 6.436E-03 |
|---|
| nuclear import | GO:0051170 | | 8.331E-06 | 5.011E-03 |
|---|
| protein localization in nucleus | GO:0034504 | | 1.033E-05 | 4.971E-03 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 7.473E-05 | 0.02996666 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.068E-05 | 0.02773259 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 1.527E-04 | 0.04591091 |
|---|
| receptor-mediated endocytosis | GO:0006898 | | 2.066E-04 | 0.05523664 |
|---|
| response to insulin stimulus | GO:0032868 | | 2.366E-04 | 0.05693083 |
|---|
| amino acid activation | GO:0043038 | | 3.026E-04 | 0.06619244 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 5.575E-08 | 1.341E-04 |
|---|
| neuropeptide signaling pathway | GO:0007218 | | 7.151E-06 | 8.603E-03 |
|---|
| protein import into nucleus | GO:0006606 | | 8.025E-06 | 6.436E-03 |
|---|
| nuclear import | GO:0051170 | | 8.331E-06 | 5.011E-03 |
|---|
| protein localization in nucleus | GO:0034504 | | 1.033E-05 | 4.971E-03 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 7.473E-05 | 0.02996666 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 8.068E-05 | 0.02773259 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 1.527E-04 | 0.04591091 |
|---|
| receptor-mediated endocytosis | GO:0006898 | | 2.066E-04 | 0.05523664 |
|---|
| response to insulin stimulus | GO:0032868 | | 2.366E-04 | 0.05693083 |
|---|
| amino acid activation | GO:0043038 | | 3.026E-04 | 0.06619244 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 1.789E-07 | 4.114E-04 |
|---|
| protein import into nucleus | GO:0006606 | | 2.02E-05 | 0.02322793 |
|---|
| nuclear import | GO:0051170 | | 2.103E-05 | 0.01612358 |
|---|
| protein localization in nucleus | GO:0034504 | | 2.553E-05 | 0.01468201 |
|---|
| protein import | GO:0017038 | | 4.835E-05 | 0.02224079 |
|---|
| Ras protein signal transduction | GO:0007265 | | 4.982E-05 | 0.01909899 |
|---|
| protein localization in organelle | GO:0033365 | | 4.982E-05 | 0.01637057 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.396E-04 | 0.04013334 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.642E-04 | 0.04197229 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.826E-04 | 0.06498711 |
|---|
| amino acid activation | GO:0043038 | | 3.35E-04 | 0.07004858 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 1.789E-07 | 4.114E-04 |
|---|
| protein import into nucleus | GO:0006606 | | 2.02E-05 | 0.02322793 |
|---|
| nuclear import | GO:0051170 | | 2.103E-05 | 0.01612358 |
|---|
| protein localization in nucleus | GO:0034504 | | 2.553E-05 | 0.01468201 |
|---|
| protein import | GO:0017038 | | 4.835E-05 | 0.02224079 |
|---|
| Ras protein signal transduction | GO:0007265 | | 4.982E-05 | 0.01909899 |
|---|
| protein localization in organelle | GO:0033365 | | 4.982E-05 | 0.01637057 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.396E-04 | 0.04013334 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.642E-04 | 0.04197229 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.826E-04 | 0.06498711 |
|---|
| amino acid activation | GO:0043038 | | 3.35E-04 | 0.07004858 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| NLS-bearing substrate import into nucleus | GO:0006607 | | 1.789E-07 | 4.114E-04 |
|---|
| protein import into nucleus | GO:0006606 | | 2.02E-05 | 0.02322793 |
|---|
| nuclear import | GO:0051170 | | 2.103E-05 | 0.01612358 |
|---|
| protein localization in nucleus | GO:0034504 | | 2.553E-05 | 0.01468201 |
|---|
| protein import | GO:0017038 | | 4.835E-05 | 0.02224079 |
|---|
| Ras protein signal transduction | GO:0007265 | | 4.982E-05 | 0.01909899 |
|---|
| protein localization in organelle | GO:0033365 | | 4.982E-05 | 0.01637057 |
|---|
| insulin receptor signaling pathway | GO:0008286 | | 1.396E-04 | 0.04013334 |
|---|
| epidermal growth factor receptor signaling pathway | GO:0007173 | | 1.642E-04 | 0.04197229 |
|---|
| cellular response to insulin stimulus | GO:0032869 | | 2.826E-04 | 0.06498711 |
|---|
| amino acid activation | GO:0043038 | | 3.35E-04 | 0.07004858 |
|---|
