Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 1981-2-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1970	7.227e-03	1.465e-02	3.003e-02
IPC-NIBC-129	0.2056	5.566e-02	3.067e-02	2.273e-01
Ivshina_GPL96-GPL97	0.2587	2.744e-02	1.790e-02	2.575e-01
Loi_GPL570	0.2643	1.147e-01	8.991e-02	4.316e-01
Loi_GPL96-GPL97	0.1873	5.335e-03	1.400e-05	4.325e-02
Pawitan_GPL96-GPL97	0.3782	8.775e-01	8.643e-01	9.998e-01
Schmidt	0.1892	1.751e-02	2.431e-02	9.845e-02
Sotiriou	0.2911	7.205e-02	5.217e-02	4.480e-01
Zhang	0.0275	2.884e-03	4.273e-03	1.386e-02

Expression data for subnetwork 1981-2-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 1981-2-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
hspb1		5	13	118	99	0.190	-0.050	0.184	0.212	0.231	0.289	-0.021	0.201	-0.077
rrm2		1	57	143	144	0.131	0.207	0.227	0.187	0.161	0.303	0.190	0.219	0.129
dkc1		1	57	143	144	-0.064	0.229	0.078	0.185	0.115	0.172	0.246	0.140	0.043
eif4g1		1	57	143	144	0.123	0.262	0.043	0.013	0.098	0.194	0.076	0.147	-0.028

GO Enrichment output for subnetwork 1981-2-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		7.858E-10	1.807E-06
nucleoside diphosphate metabolic process	GO:0009132		1.375E-09	1.581E-06
deoxyribonucleotide metabolic process	GO:0009262		5.212E-08	3.996E-05
regulation of translational initiation	GO:0006446		5.538E-07	3.184E-04
protein oligomerization	GO:0051259		1.699E-06	7.815E-04
pseudouridine synthesis	GO:0001522		3.844E-06	1.473E-03
telomere maintenance via telomerase	GO:0007004		4.941E-06	1.623E-03
RNA-dependent DNA replication	GO:0006278		6.175E-06	1.775E-03
regulation of translation	GO:0006417		6.252E-06	1.598E-03
telomere organization	GO:0032200		3.463E-05	7.965E-03
response to heat	GO:0009408		5.947E-05	0.01243359

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of translational initiation	GO:0006446		6.608E-08	1.614E-04
deoxyribonucleotide biosynthetic process	GO:0009263		4.985E-07	6.089E-04
nucleoside diphosphate metabolic process	GO:0009132		8.544E-07	6.958E-04
telomere maintenance via telomerase	GO:0007004		1.305E-06	7.971E-04
pseudouridine synthesis	GO:0001522		1.851E-06	9.043E-04
RNA-dependent DNA replication	GO:0006278		2.159E-06	8.791E-04
deoxyribonucleotide metabolic process	GO:0009262		5.998E-06	2.093E-03
telomere organization	GO:0032200		7.704E-06	2.353E-03
response to heat	GO:0009408		1.102E-05	2.991E-03
RNA modification	GO:0009451		1.942E-05	4.743E-03
response to temperature stimulus	GO:0009266		3.017E-05	6.7E-03

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		2.69E-10	6.472E-07
nucleoside diphosphate metabolic process	GO:0009132		6.454E-10	7.764E-07
deoxyribonucleotide metabolic process	GO:0009262		1.182E-08	9.478E-06
regulation of translational initiation	GO:0006446		1.792E-07	1.078E-04
protein oligomerization	GO:0051259		5.805E-07	2.794E-04
telomere maintenance via telomerase	GO:0007004		2.544E-06	1.02E-03
pseudouridine synthesis	GO:0001522		3.607E-06	1.24E-03
RNA-dependent DNA replication	GO:0006278		3.607E-06	1.085E-03
telomere organization	GO:0032200		1.386E-05	3.704E-03
response to heat	GO:0009408		2.008E-05	4.831E-03
RNA modification	GO:0009451		3.417E-05	7.475E-03

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of translational initiation	GO:0006446		6.608E-08	1.614E-04
deoxyribonucleotide biosynthetic process	GO:0009263		4.985E-07	6.089E-04
nucleoside diphosphate metabolic process	GO:0009132		8.544E-07	6.958E-04
telomere maintenance via telomerase	GO:0007004		1.305E-06	7.971E-04
pseudouridine synthesis	GO:0001522		1.851E-06	9.043E-04
RNA-dependent DNA replication	GO:0006278		2.159E-06	8.791E-04
deoxyribonucleotide metabolic process	GO:0009262		5.998E-06	2.093E-03
telomere organization	GO:0032200		7.704E-06	2.353E-03
response to heat	GO:0009408		1.102E-05	2.991E-03
RNA modification	GO:0009451		1.942E-05	4.743E-03
response to temperature stimulus	GO:0009266		3.017E-05	6.7E-03

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		2.69E-10	6.472E-07
nucleoside diphosphate metabolic process	GO:0009132		6.454E-10	7.764E-07
deoxyribonucleotide metabolic process	GO:0009262		1.182E-08	9.478E-06
regulation of translational initiation	GO:0006446		1.792E-07	1.078E-04
protein oligomerization	GO:0051259		5.805E-07	2.794E-04
telomere maintenance via telomerase	GO:0007004		2.544E-06	1.02E-03
pseudouridine synthesis	GO:0001522		3.607E-06	1.24E-03
RNA-dependent DNA replication	GO:0006278		3.607E-06	1.085E-03
telomere organization	GO:0032200		1.386E-05	3.704E-03
response to heat	GO:0009408		2.008E-05	4.831E-03
RNA modification	GO:0009451		3.417E-05	7.475E-03

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		2.69E-10	6.472E-07
nucleoside diphosphate metabolic process	GO:0009132		6.454E-10	7.764E-07
deoxyribonucleotide metabolic process	GO:0009262		1.182E-08	9.478E-06
regulation of translational initiation	GO:0006446		1.792E-07	1.078E-04
protein oligomerization	GO:0051259		5.805E-07	2.794E-04
telomere maintenance via telomerase	GO:0007004		2.544E-06	1.02E-03
pseudouridine synthesis	GO:0001522		3.607E-06	1.24E-03
RNA-dependent DNA replication	GO:0006278		3.607E-06	1.085E-03
telomere organization	GO:0032200		1.386E-05	3.704E-03
response to heat	GO:0009408		2.008E-05	4.831E-03
RNA modification	GO:0009451		3.417E-05	7.475E-03

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		7.858E-10	1.807E-06
nucleoside diphosphate metabolic process	GO:0009132		1.375E-09	1.581E-06
deoxyribonucleotide metabolic process	GO:0009262		5.212E-08	3.996E-05
regulation of translational initiation	GO:0006446		5.538E-07	3.184E-04
protein oligomerization	GO:0051259		1.699E-06	7.815E-04
pseudouridine synthesis	GO:0001522		3.844E-06	1.473E-03
telomere maintenance via telomerase	GO:0007004		4.941E-06	1.623E-03
RNA-dependent DNA replication	GO:0006278		6.175E-06	1.775E-03
regulation of translation	GO:0006417		6.252E-06	1.598E-03
telomere organization	GO:0032200		3.463E-05	7.965E-03
response to heat	GO:0009408		5.947E-05	0.01243359

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		7.858E-10	1.807E-06
nucleoside diphosphate metabolic process	GO:0009132		1.375E-09	1.581E-06
deoxyribonucleotide metabolic process	GO:0009262		5.212E-08	3.996E-05
regulation of translational initiation	GO:0006446		5.538E-07	3.184E-04
protein oligomerization	GO:0051259		1.699E-06	7.815E-04
pseudouridine synthesis	GO:0001522		3.844E-06	1.473E-03
telomere maintenance via telomerase	GO:0007004		4.941E-06	1.623E-03
RNA-dependent DNA replication	GO:0006278		6.175E-06	1.775E-03
regulation of translation	GO:0006417		6.252E-06	1.598E-03
telomere organization	GO:0032200		3.463E-05	7.965E-03
response to heat	GO:0009408		5.947E-05	0.01243359

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
deoxyribonucleotide biosynthetic process	GO:0009263		7.858E-10	1.807E-06
nucleoside diphosphate metabolic process	GO:0009132		1.375E-09	1.581E-06
deoxyribonucleotide metabolic process	GO:0009262		5.212E-08	3.996E-05
regulation of translational initiation	GO:0006446		5.538E-07	3.184E-04
protein oligomerization	GO:0051259		1.699E-06	7.815E-04
pseudouridine synthesis	GO:0001522		3.844E-06	1.473E-03
telomere maintenance via telomerase	GO:0007004		4.941E-06	1.623E-03
RNA-dependent DNA replication	GO:0006278		6.175E-06	1.775E-03
regulation of translation	GO:0006417		6.252E-06	1.598E-03
telomere organization	GO:0032200		3.463E-05	7.965E-03
response to heat	GO:0009408		5.947E-05	0.01243359