Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1173-1-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1792 | 1.393e-02 | 2.632e-02 | 5.536e-02 |
|---|
| IPC-NIBC-129 | 0.2994 | 2.703e-02 | 1.291e-02 | 9.795e-02 |
|---|
| Ivshina_GPL96-GPL97 | 0.2273 | 4.064e-03 | 1.788e-03 | 3.698e-02 |
|---|
| Loi_GPL570 | 0.3214 | 8.526e-02 | 6.062e-02 | 3.483e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1491 | 1.020e-02 | 9.700e-05 | 1.049e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.2127 | 4.280e-01 | 3.369e-01 | 9.351e-01 |
|---|
| Schmidt | 0.2107 | 4.091e-02 | 5.503e-02 | 2.202e-01 |
|---|
| Sotiriou | 0.2372 | 1.357e-01 | 1.017e-01 | 6.642e-01 |
|---|
| Zhang | 0.1121 | 4.472e-02 | 6.515e-02 | 1.408e-01 |
|---|
Expression data for subnetwork 1173-1-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1173-1-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| ap2m1 |   | 1 | 57 | 167 | 168 | 0.089 | 0.224 | 0.153 | 0.180 | 0.060 | 0.015 | 0.103 | 0.050 | -0.044 |
|---|
| gak | | 1 | 57 | 167 | 168 | 0.120 | -0.018 | 0.068 | 0.106 | 0.092 | 0.059 | -0.069 | 0.056 | 0.016 |
|---|
| ndrg1 | | 3 | 25 | 37 | 34 | 0.072 | 0.301 | 0.084 | 0.324 | 0.108 | 0.083 | 0.068 | 0.064 | 0.092 |
|---|
| birc5 | | 8 | 11 | 37 | 28 | 0.101 | 0.216 | 0.190 | 0.134 | 0.223 | 0.202 | 0.236 | 0.241 | 0.205 |
|---|
| hsp90aa1 | | 6 | 12 | 37 | 29 | 0.116 | 0.030 | 0.164 | 0.076 | 0.119 | 0.169 | 0.069 | 0.102 | -0.011 |
|---|
GO Enrichment output for subnetwork 1173-1-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 |  | 4.412E-06 | 0.01014785 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 6.175E-06 | 3.551E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 6.175E-06 | 2.841E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.367E-03 |
|---|
| mast cell activation | GO:0045576 | | 6.175E-06 | 2.029E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 8.231E-06 | 2.366E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 2.704E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 2.67E-05 | 6.141E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 5.583E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 1.305E-06 | 3.189E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.827E-06 | 2.232E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 1.827E-06 | 1.488E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 2.436E-06 | 1.487E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 2.436E-06 | 1.19E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 2.436E-06 | 9.917E-04 |
|---|
| mast cell activation | GO:0045576 | | 2.436E-06 | 8.5E-04 |
|---|
| establishment of chromosome localization | GO:0051303 | | 2.436E-06 | 7.437E-04 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 5.737E-06 | 1.557E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 7.907E-06 | 1.932E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 1.181E-05 | 2.623E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 1.818E-06 | 4.373E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 3.061E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 2.041E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 3.392E-06 | 2.04E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 3.392E-06 | 1.632E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 3.392E-06 | 1.36E-03 |
|---|
| mast cell activation | GO:0045576 | | 3.392E-06 | 1.166E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 3.392E-06 | 1.02E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 7.988E-06 | 2.136E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 1.101E-05 | 2.649E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 1.451E-05 | 3.174E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 1.305E-06 | 3.189E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 1.827E-06 | 2.232E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 1.827E-06 | 1.488E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 2.436E-06 | 1.487E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 2.436E-06 | 1.19E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 2.436E-06 | 9.917E-04 |
|---|
| mast cell activation | GO:0045576 | | 2.436E-06 | 8.5E-04 |
|---|
| establishment of chromosome localization | GO:0051303 | | 2.436E-06 | 7.437E-04 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 5.737E-06 | 1.557E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 7.907E-06 | 1.932E-03 |
|---|
| negative regulation of peptidase activity | GO:0010466 | | 1.181E-05 | 2.623E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 1.818E-06 | 4.373E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 3.061E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 2.041E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 3.392E-06 | 2.04E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 3.392E-06 | 1.632E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 3.392E-06 | 1.36E-03 |
|---|
| mast cell activation | GO:0045576 | | 3.392E-06 | 1.166E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 3.392E-06 | 1.02E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 7.988E-06 | 2.136E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 1.101E-05 | 2.649E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 1.451E-05 | 3.174E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 1.818E-06 | 4.373E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.544E-06 | 3.061E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 2.544E-06 | 2.041E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 3.392E-06 | 2.04E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 3.392E-06 | 1.632E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 3.392E-06 | 1.36E-03 |
|---|
| mast cell activation | GO:0045576 | | 3.392E-06 | 1.166E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 3.392E-06 | 1.02E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 7.988E-06 | 2.136E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 1.101E-05 | 2.649E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 1.451E-05 | 3.174E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 4.412E-06 | 0.01014785 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 6.175E-06 | 3.551E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 6.175E-06 | 2.841E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.367E-03 |
|---|
| mast cell activation | GO:0045576 | | 6.175E-06 | 2.029E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 8.231E-06 | 2.366E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 2.704E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 2.67E-05 | 6.141E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 5.583E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 4.412E-06 | 0.01014785 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 6.175E-06 | 3.551E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 6.175E-06 | 2.841E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.367E-03 |
|---|
| mast cell activation | GO:0045576 | | 6.175E-06 | 2.029E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 8.231E-06 | 2.366E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 2.704E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 2.67E-05 | 6.141E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 5.583E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| protein refolding | GO:0042026 | | 4.412E-06 | 0.01014785 |
|---|
| spindle checkpoint | GO:0031577 | | 4.412E-06 | 5.074E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of defense response to virus by virus | GO:0050690 | | 6.175E-06 | 3.551E-03 |
|---|
| outer mitochondrial membrane organization | GO:0007008 | | 6.175E-06 | 2.841E-03 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 6.175E-06 | 2.367E-03 |
|---|
| mast cell activation | GO:0045576 | | 6.175E-06 | 2.029E-03 |
|---|
| chaperone-mediated protein complex assembly | GO:0051131 | | 8.231E-06 | 2.366E-03 |
|---|
| regulation of exit from mitosis | GO:0007096 | | 1.058E-05 | 2.704E-03 |
|---|
| regulation of defense response to virus | GO:0050688 | | 2.67E-05 | 6.141E-03 |
|---|
| negative regulation of caspase activity | GO:0043154 | | 2.67E-05 | 5.583E-03 |
|---|
