Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 10971-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.2458 | 6.625e-03 | 1.355e-02 | 2.766e-02 |
|---|
| IPC-NIBC-129 | 0.1576 | 5.677e-02 | 3.140e-02 | 2.321e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2629 | 7.120e-02 | 5.570e-02 | 5.272e-01 |
|---|
| Loi_GPL570 | 0.2627 | 2.955e-01 | 3.018e-01 | 7.568e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2020 | 8.570e-04 | 0.000e+00 | 2.186e-03 |
|---|
| Pawitan_GPL96-GPL97 | 0.3277 | 1.490e-01 | 8.001e-02 | 6.139e-01 |
|---|
| Schmidt | 0.1180 | 1.932e-02 | 2.674e-02 | 1.086e-01 |
|---|
| Sotiriou | 0.2849 | 5.618e-02 | 4.021e-02 | 3.728e-01 |
|---|
| Zhang | 0.2158 | 6.715e-03 | 9.983e-03 | 2.888e-02 |
|---|
Expression data for subnetwork 10971-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 10971-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| cdkn3 |   | 12 | 5 | 31 | 16 | 0.114 | 0.269 | 0.199 | 0.136 | 0.193 | 0.323 | 0.186 | 0.198 | 0.271 |
|---|
| cdc25b | | 3 | 25 | 68 | 58 | 0.197 | 0.107 | 0.134 | 0.223 | 0.092 | 0.200 | 0.067 | 0.115 | 0.048 |
|---|
| ywhaq | | 1 | 57 | 98 | 103 | 0.129 | 0.110 | 0.049 | 0.116 | 0.071 | 0.038 | 0.007 | 0.054 | 0.138 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| krt18 | | 5 | 13 | 46 | 37 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | -0.114 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 10971-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 |  | 1.643E-06 | 3.78E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 3.182E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 1.058E-05 | 6.083E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 6.189E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 5.527E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 0.01156221 |
|---|
| oogenesis | GO:0048477 | | 3.519E-05 | 0.01011693 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 4.484E-05 | 0.01145886 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 6.149E-05 | 0.01414211 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 7.403E-05 | 0.01547952 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.323E-07 | 8.117E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 7.809E-04 |
|---|
| female meiosis | GO:0007143 | | 8.703E-07 | 7.087E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.827E-06 | 1.116E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.827E-06 | 8.926E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.436E-06 | 9.917E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.3E-06 | 1.152E-03 |
|---|
| oocyte development | GO:0048599 | | 4.782E-06 | 1.46E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 5.737E-06 | 1.557E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.649E-05 | 4.029E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.394E-05 | 5.317E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.972E-07 | 9.555E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 7.641E-07 | 9.192E-04 |
|---|
| female meiosis | GO:0007143 | | 9.918E-07 | 7.954E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 1.252E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.234E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.186E-03 |
|---|
| oocyte development | GO:0048599 | | 4.459E-06 | 1.192E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 5.449E-06 | 1.311E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.692E-05 | 3.7E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.323E-07 | 8.117E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 7.809E-04 |
|---|
| female meiosis | GO:0007143 | | 8.703E-07 | 7.087E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.827E-06 | 1.116E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.827E-06 | 8.926E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.436E-06 | 9.917E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.3E-06 | 1.152E-03 |
|---|
| oocyte development | GO:0048599 | | 4.782E-06 | 1.46E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 5.737E-06 | 1.557E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.649E-05 | 4.029E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.394E-05 | 5.317E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.972E-07 | 9.555E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 7.641E-07 | 9.192E-04 |
|---|
| female meiosis | GO:0007143 | | 9.918E-07 | 7.954E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 1.252E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.234E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.186E-03 |
|---|
| oocyte development | GO:0048599 | | 4.459E-06 | 1.192E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 5.449E-06 | 1.311E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.692E-05 | 3.7E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 3.972E-07 | 9.555E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 7.641E-07 | 9.192E-04 |
|---|
| female meiosis | GO:0007143 | | 9.918E-07 | 7.954E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.082E-06 | 1.252E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.082E-06 | 1.002E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 1.113E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.234E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.186E-03 |
|---|
| oocyte development | GO:0048599 | | 4.459E-06 | 1.192E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 5.449E-06 | 1.311E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.692E-05 | 3.7E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 3.78E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 3.182E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 1.058E-05 | 6.083E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 6.189E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 5.527E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 0.01156221 |
|---|
| oogenesis | GO:0048477 | | 3.519E-05 | 0.01011693 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 4.484E-05 | 0.01145886 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 6.149E-05 | 0.01414211 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 7.403E-05 | 0.01547952 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 3.78E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 3.182E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 1.058E-05 | 6.083E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 6.189E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 5.527E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 0.01156221 |
|---|
| oogenesis | GO:0048477 | | 3.519E-05 | 0.01011693 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 4.484E-05 | 0.01145886 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 6.149E-05 | 0.01414211 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 7.403E-05 | 0.01547952 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 1.643E-06 | 3.78E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.767E-06 | 3.182E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| oocyte differentiation | GO:0009994 | | 1.058E-05 | 6.083E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 6.189E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 5.527E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 0.01156221 |
|---|
| oogenesis | GO:0048477 | | 3.519E-05 | 0.01011693 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 4.484E-05 | 0.01145886 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 6.149E-05 | 0.01414211 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 7.403E-05 | 0.01547952 |
|---|
