Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 10733-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1760 | 1.164e-02 | 2.243e-02 | 4.692e-02 |
|---|
| IPC-NIBC-129 | 0.1730 | 2.904e-02 | 1.407e-02 | 1.071e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2359 | 5.250e-02 | 3.882e-02 | 4.295e-01 |
|---|
| Loi_GPL570 | 0.3158 | 1.198e-01 | 9.531e-02 | 4.450e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1850 | 1.143e-02 | 1.350e-04 | 1.212e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3542 | 6.760e-02 | 2.700e-02 | 3.654e-01 |
|---|
| Schmidt | 0.1859 | 1.661e-02 | 2.310e-02 | 9.336e-02 |
|---|
| Sotiriou | 0.2944 | 7.492e-02 | 5.435e-02 | 4.605e-01 |
|---|
| Zhang | 0.2889 | 4.312e-03 | 6.404e-03 | 1.969e-02 |
|---|
Expression data for subnetwork 10733-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 10733-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| plk4 |   | 1 | 57 | 23 | 38 | 0.055 | 0.176 | 0.020 | 0.214 | 0.102 | 0.190 | 0.200 | 0.094 | 0.145 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| slc25a4 | | 1 | 57 | 23 | 38 | 0.084 | 0.041 | 0.064 | 0.086 | 0.187 | 0.166 | 0.004 | 0.178 | 0.025 |
|---|
| sfn | | 2 | 35 | 17 | 17 | 0.077 | 0.137 | 0.111 | 0.172 | 0.112 | 0.219 | 0.100 | 0.147 | 0.079 |
|---|
| bax | | 1 | 57 | 23 | 38 | 0.029 | 0.185 | 0.233 | 0.192 | 0.088 | 0.172 | 0.175 | 0.019 | 0.041 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 10733-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 5.051E-06 | 0.01161803 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.053E-06 | 0.01041131 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 9.053E-06 | 6.941E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.054E-05 | 6.059E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.155E-05 | 5.312E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 1.207E-05 | 4.625E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 1.207E-05 | 3.965E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.435E-05 | 4.125E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 1.496E-05 | 3.823E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 2.367E-05 | 5.445E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 2.84E-05 | 5.938E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.106E-06 | 2.701E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.441E-06 | 2.981E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 2.59E-06 | 2.109E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 2.752E-06 | 1.681E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 3.329E-06 | 1.626E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 3.453E-06 | 1.406E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 3.453E-06 | 1.205E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 3.98E-06 | 1.215E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 6.779E-06 | 1.84E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 9.61E-06 | 2.348E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 9.61E-06 | 2.134E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.397E-06 | 3.361E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.838E-06 | 3.414E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 3.053E-06 | 2.448E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 3.083E-06 | 1.855E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 3.757E-06 | 1.808E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.07E-06 | 1.632E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 4.07E-06 | 1.399E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 4.854E-06 | 1.46E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 5.231E-06 | 1.398E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 9.584E-06 | 2.306E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 9.584E-06 | 2.096E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.106E-06 | 2.701E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.441E-06 | 2.981E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 2.59E-06 | 2.109E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 2.752E-06 | 1.681E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 3.329E-06 | 1.626E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 3.453E-06 | 1.406E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 3.453E-06 | 1.205E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 3.98E-06 | 1.215E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 6.779E-06 | 1.84E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 9.61E-06 | 2.348E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 9.61E-06 | 2.134E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.397E-06 | 3.361E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.838E-06 | 3.414E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 3.053E-06 | 2.448E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 3.083E-06 | 1.855E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 3.757E-06 | 1.808E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.07E-06 | 1.632E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 4.07E-06 | 1.399E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 4.854E-06 | 1.46E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 5.231E-06 | 1.398E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 9.584E-06 | 2.306E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 9.584E-06 | 2.096E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.397E-06 | 3.361E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.838E-06 | 3.414E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 3.053E-06 | 2.448E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 3.083E-06 | 1.855E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 3.757E-06 | 1.808E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 4.07E-06 | 1.632E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 4.07E-06 | 1.399E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 4.854E-06 | 1.46E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 5.231E-06 | 1.398E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 9.584E-06 | 2.306E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 9.584E-06 | 2.096E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.051E-06 | 0.01161803 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.053E-06 | 0.01041131 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 9.053E-06 | 6.941E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.054E-05 | 6.059E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.155E-05 | 5.312E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 1.207E-05 | 4.625E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 1.207E-05 | 3.965E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.435E-05 | 4.125E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 1.496E-05 | 3.823E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 2.367E-05 | 5.445E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 2.84E-05 | 5.938E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.051E-06 | 0.01161803 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.053E-06 | 0.01041131 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 9.053E-06 | 6.941E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.054E-05 | 6.059E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.155E-05 | 5.312E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 1.207E-05 | 4.625E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 1.207E-05 | 3.965E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.435E-05 | 4.125E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 1.496E-05 | 3.823E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 2.367E-05 | 5.445E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 2.84E-05 | 5.938E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.051E-06 | 0.01161803 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.053E-06 | 0.01041131 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 9.053E-06 | 6.941E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.054E-05 | 6.059E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.155E-05 | 5.312E-03 |
|---|
| neurotransmitter uptake | GO:0001504 | | 1.207E-05 | 4.625E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 1.207E-05 | 3.965E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.435E-05 | 4.125E-03 |
|---|
| mitochondrion organization | GO:0007005 | | 1.496E-05 | 3.823E-03 |
|---|
| L-glutamate transport | GO:0015813 | | 2.367E-05 | 5.445E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 2.84E-05 | 5.938E-03 |
|---|
