Study run-b2

Study informations

100 subnetworks in total page | file

190 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 10575-0-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1113	1.436e-02	2.704e-02	5.692e-02
IPC-NIBC-129	0.2215	9.244e-02	5.634e-02	3.783e-01
Ivshina_GPL96-GPL97	0.2259	1.993e-02	1.220e-02	1.937e-01
Loi_GPL570	0.2235	1.255e-01	1.013e-01	4.594e-01
Loi_GPL96-GPL97	0.2188	1.034e-01	5.039e-02	8.012e-01
Pawitan_GPL96-GPL97	0.3666	1.510e-01	8.147e-02	6.185e-01
Schmidt	0.1825	2.329e-02	3.203e-02	1.305e-01
Sotiriou	0.2731	4.225e-02	2.988e-02	2.968e-01
Zhang	0.2145	3.503e-03	5.198e-03	1.643e-02

Expression data for subnetwork 10575-0-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Zhang

Desmedt

Score for each gene in subnetwork 10575-0-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Zhang
ccne1		1	57	125	128	-0.008	0.268	0.092	-0.012	0.115	0.205	0.201	0.074	0.026
cct4		1	57	125	128	-0.026	0.200	0.090	0.205	0.082	0.315	0.176	0.068	-0.061
cdc2		83	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.297
ccnb1		25	3	46	33	0.082	0.246	0.212	0.224	0.256	0.351	0.129	0.249	0.167
ccnd1		76	2	1	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.144

GO Enrichment output for subnetwork 10575-0-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		3.764E-08	8.657E-05
interphase	GO:0051325		4.132E-08	4.751E-05
G1/S transition of mitotic cell cycle	GO:0000082		7.696E-07	5.9E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.236E-06	1.286E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.349E-06	1.08E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		2.711E-06	1.039E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		2.711E-06	8.908E-04
positive regulation of ligase activity	GO:0051351		3.249E-06	9.341E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		3.543E-06	9.054E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.844E-06	8.841E-04
regulation of ligase activity	GO:0051340		4.182E-06	8.744E-04

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.773E-09	1.655E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.695E-07	2.07E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		5.579E-07	4.543E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		5.832E-07	3.562E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		6.636E-07	3.242E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		6.636E-07	2.702E-04
positive regulation of ligase activity	GO:0051351		8.134E-07	2.839E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		8.791E-07	2.685E-04
regulation of ligase activity	GO:0051340		1.059E-06	2.874E-04
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.44E-06	3.518E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.595E-06	3.541E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.156E-08	2.782E-05
interphase	GO:0051325		1.312E-08	1.578E-05
G1/S transition of mitotic cell cycle	GO:0000082		2.783E-07	2.232E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		9.158E-07	5.508E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		9.573E-07	4.606E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.089E-06	4.368E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.089E-06	3.744E-04
positive regulation of ligase activity	GO:0051351		1.335E-06	4.015E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		1.443E-06	3.857E-04
regulation of ligase activity	GO:0051340		1.737E-06	4.179E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.221E-06	4.857E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		6.773E-09	1.655E-05
G1/S transition of mitotic cell cycle	GO:0000082		1.695E-07	2.07E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		5.579E-07	4.543E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		5.832E-07	3.562E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		6.636E-07	3.242E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		6.636E-07	2.702E-04
positive regulation of ligase activity	GO:0051351		8.134E-07	2.839E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		8.791E-07	2.685E-04
regulation of ligase activity	GO:0051340		1.059E-06	2.874E-04
proteasomal ubiquitin-dependent protein catabolic process	GO:0043161		1.44E-06	3.518E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.595E-06	3.541E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.156E-08	2.782E-05
interphase	GO:0051325		1.312E-08	1.578E-05
G1/S transition of mitotic cell cycle	GO:0000082		2.783E-07	2.232E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		9.158E-07	5.508E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		9.573E-07	4.606E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.089E-06	4.368E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.089E-06	3.744E-04
positive regulation of ligase activity	GO:0051351		1.335E-06	4.015E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		1.443E-06	3.857E-04
regulation of ligase activity	GO:0051340		1.737E-06	4.179E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.221E-06	4.857E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		1.156E-08	2.782E-05
interphase	GO:0051325		1.312E-08	1.578E-05
G1/S transition of mitotic cell cycle	GO:0000082		2.783E-07	2.232E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		9.158E-07	5.508E-04
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		9.573E-07	4.606E-04
positive regulation of ubiquitin-protein ligase activity	GO:0051443		1.089E-06	4.368E-04
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		1.089E-06	3.744E-04
positive regulation of ligase activity	GO:0051351		1.335E-06	4.015E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		1.443E-06	3.857E-04
regulation of ligase activity	GO:0051340		1.737E-06	4.179E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		2.221E-06	4.857E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		3.764E-08	8.657E-05
interphase	GO:0051325		4.132E-08	4.751E-05
G1/S transition of mitotic cell cycle	GO:0000082		7.696E-07	5.9E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.236E-06	1.286E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.349E-06	1.08E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		2.711E-06	1.039E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		2.711E-06	8.908E-04
positive regulation of ligase activity	GO:0051351		3.249E-06	9.341E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		3.543E-06	9.054E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.844E-06	8.841E-04
regulation of ligase activity	GO:0051340		4.182E-06	8.744E-04

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		3.764E-08	8.657E-05
interphase	GO:0051325		4.132E-08	4.751E-05
G1/S transition of mitotic cell cycle	GO:0000082		7.696E-07	5.9E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.236E-06	1.286E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.349E-06	1.08E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		2.711E-06	1.039E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		2.711E-06	8.908E-04
positive regulation of ligase activity	GO:0051351		3.249E-06	9.341E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		3.543E-06	9.054E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.844E-06	8.841E-04
regulation of ligase activity	GO:0051340		4.182E-06	8.744E-04

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
interphase of mitotic cell cycle	GO:0051329		3.764E-08	8.657E-05
interphase	GO:0051325		4.132E-08	4.751E-05
G1/S transition of mitotic cell cycle	GO:0000082		7.696E-07	5.9E-04
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145		2.236E-06	1.286E-03
positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051437		2.349E-06	1.08E-03
positive regulation of ubiquitin-protein ligase activity	GO:0051443		2.711E-06	1.039E-03
regulation of ubiquitin-protein ligase activity during mitotic cell cycle	GO:0051439		2.711E-06	8.908E-04
positive regulation of ligase activity	GO:0051351		3.249E-06	9.341E-04
regulation of ubiquitin-protein ligase activity	GO:0051438		3.543E-06	9.054E-04
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		3.844E-06	8.841E-04
regulation of ligase activity	GO:0051340		4.182E-06	8.744E-04