Study run-b2
Study informations
100 subnetworks in total page | file
190 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 1033-0-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1635 | 1.132e-02 | 2.188e-02 | 4.572e-02 |
|---|
| IPC-NIBC-129 | 0.1727 | 1.031e-01 | 6.420e-02 | 4.175e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2373 | 5.283e-02 | 3.911e-02 | 4.314e-01 |
|---|
| Loi_GPL570 | 0.2147 | 1.772e-01 | 1.586e-01 | 5.739e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2500 | 1.782e-02 | 4.870e-04 | 2.049e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3347 | 4.210e-02 | 1.406e-02 | 2.525e-01 |
|---|
| Schmidt | 0.1570 | 1.953e-02 | 2.702e-02 | 1.098e-01 |
|---|
| Sotiriou | 0.2842 | 2.467e-02 | 1.709e-02 | 1.847e-01 |
|---|
| Zhang | 0.3318 | 5.973e-03 | 8.880e-03 | 2.611e-02 |
|---|
Expression data for subnetwork 1033-0-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 1033-0-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Zhang |
|---|
| cdkn3 |   | 12 | 5 | 31 | 16 | 0.114 | 0.269 | 0.199 | 0.136 | 0.193 | 0.323 | 0.186 | 0.198 | 0.271 |
|---|
| cdc2 | | 83 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.297 |
|---|
| ccnd1 | | 76 | 2 | 1 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.144 |
|---|
GO Enrichment output for subnetwork 1033-0-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 |  | 2.758E-07 | 6.343E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.649E-07 | 5.347E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.06E-06 | 1.579E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.274E-06 | 1.308E-03 |
|---|
| interphase | GO:0051325 | | 2.438E-06 | 1.122E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.175E-05 | 4.506E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 2.056E-05 | 6.754E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 2.476E-05 | 7.118E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 2.7E-05 | 6.901E-03 |
|---|
| response to calcium ion | GO:0051592 | | 7.613E-05 | 0.01750924 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 9.655E-05 | 0.02018755 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 7.074E-08 | 1.728E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.362E-07 | 1.664E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 7.057E-07 | 5.746E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.303E-07 | 5.682E-04 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 6.306E-06 | 3.081E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 1.078E-05 | 4.389E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 1.254E-05 | 4.375E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 1.346E-05 | 4.111E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.734E-05 | 0.01013549 |
|---|
| response to calcium ion | GO:0051592 | | 3.892E-05 | 9.509E-03 |
|---|
| response to UV | GO:0009411 | | 4.912E-05 | 0.01091005 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 6.648E-08 | 1.599E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.28E-07 | 1.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.039E-07 | 4.843E-04 |
|---|
| interphase | GO:0051325 | | 6.635E-07 | 3.991E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.256E-07 | 4.454E-04 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 5.647E-06 | 2.265E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 9.903E-06 | 3.404E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 1.158E-05 | 3.484E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 1.247E-05 | 3.335E-03 |
|---|
| response to calcium ion | GO:0051592 | | 3.561E-05 | 8.568E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.716E-05 | 8.127E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 7.074E-08 | 1.728E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.362E-07 | 1.664E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 7.057E-07 | 5.746E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.303E-07 | 5.682E-04 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 6.306E-06 | 3.081E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 1.078E-05 | 4.389E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 1.254E-05 | 4.375E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 1.346E-05 | 4.111E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.734E-05 | 0.01013549 |
|---|
| response to calcium ion | GO:0051592 | | 3.892E-05 | 9.509E-03 |
|---|
| response to UV | GO:0009411 | | 4.912E-05 | 0.01091005 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 6.648E-08 | 1.599E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.28E-07 | 1.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.039E-07 | 4.843E-04 |
|---|
| interphase | GO:0051325 | | 6.635E-07 | 3.991E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.256E-07 | 4.454E-04 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 5.647E-06 | 2.265E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 9.903E-06 | 3.404E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 1.158E-05 | 3.484E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 1.247E-05 | 3.335E-03 |
|---|
| response to calcium ion | GO:0051592 | | 3.561E-05 | 8.568E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.716E-05 | 8.127E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 6.648E-08 | 1.599E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.28E-07 | 1.54E-04 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.039E-07 | 4.843E-04 |
|---|
| interphase | GO:0051325 | | 6.635E-07 | 3.991E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 9.256E-07 | 4.454E-04 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 5.647E-06 | 2.265E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 9.903E-06 | 3.404E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 1.158E-05 | 3.484E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 1.247E-05 | 3.335E-03 |
|---|
| response to calcium ion | GO:0051592 | | 3.561E-05 | 8.568E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.716E-05 | 8.127E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.758E-07 | 6.343E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.649E-07 | 5.347E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.06E-06 | 1.579E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.274E-06 | 1.308E-03 |
|---|
| interphase | GO:0051325 | | 2.438E-06 | 1.122E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.175E-05 | 4.506E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 2.056E-05 | 6.754E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 2.476E-05 | 7.118E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 2.7E-05 | 6.901E-03 |
|---|
| response to calcium ion | GO:0051592 | | 7.613E-05 | 0.01750924 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 9.655E-05 | 0.02018755 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.758E-07 | 6.343E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.649E-07 | 5.347E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.06E-06 | 1.579E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.274E-06 | 1.308E-03 |
|---|
| interphase | GO:0051325 | | 2.438E-06 | 1.122E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.175E-05 | 4.506E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 2.056E-05 | 6.754E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 2.476E-05 | 7.118E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 2.7E-05 | 6.901E-03 |
|---|
| response to calcium ion | GO:0051592 | | 7.613E-05 | 0.01750924 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 9.655E-05 | 0.02018755 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| G1/S transition of mitotic cell cycle | GO:0000082 | | 2.758E-07 | 6.343E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.649E-07 | 5.347E-04 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.06E-06 | 1.579E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.274E-06 | 1.308E-03 |
|---|
| interphase | GO:0051325 | | 2.438E-06 | 1.122E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.175E-05 | 4.506E-03 |
|---|
| response to endoplasmic reticulum stress | GO:0034976 | | 2.056E-05 | 6.754E-03 |
|---|
| ER-nuclear signaling pathway | GO:0006984 | | 2.476E-05 | 7.118E-03 |
|---|
| fat cell differentiation | GO:0045444 | | 2.7E-05 | 6.901E-03 |
|---|
| response to calcium ion | GO:0051592 | | 7.613E-05 | 0.01750924 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 9.655E-05 | 0.02018755 |
|---|
