Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 993-11-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1076 | 1.811e-02 | 7.262e-03 | 9.297e-02 |
|---|
| IPC-NIBC-129 | 0.3154 | 8.061e-02 | 6.889e-02 | 3.639e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2184 | 3.186e-03 | 1.573e-03 | 4.177e-02 |
|---|
| Loi_GPL570 | 0.2352 | 7.822e-02 | 1.000e-01 | 3.173e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1871 | 1.034e-01 | 1.025e-01 | 8.197e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3322 | 7.945e-02 | 4.052e-02 | 4.277e-01 |
|---|
| Schmidt | 0.2291 | 2.160e-02 | 2.303e-02 | 1.434e-01 |
|---|
| Sotiriou | 0.2795 | 7.834e-02 | 2.954e-02 | 4.909e-01 |
|---|
| Wang | 0.1533 | 1.061e-01 | 9.063e-02 | 3.146e-01 |
|---|
| Zhang | 0.2760 | 6.256e-03 | 3.015e-03 | 3.179e-02 |
|---|
Expression data for subnetwork 993-11-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 993-11-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| tsc1 |   | 31 | 5 | 26 | 15 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.196 | 0.006 | 0.010 | 0.043 | -0.007 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| stmn2 | | 19 | 8 | 32 | 18 | 0.057 | 0.106 | 0.005 | 0.052 | 0.110 | 0.006 | 0.034 | 0.103 | 0.075 | 0.113 |
|---|
| cdc25a | | 4 | 27 | 32 | 27 | -0.019 | 0.221 | 0.093 | 0.158 | 0.120 | 0.207 | 0.211 | 0.016 | 0.069 | 0.183 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
GO Enrichment output for subnetwork 993-11-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 |  | 1.831E-06 | 4.212E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.831E-06 | 2.106E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.236E-06 | 1.714E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.349E-06 | 1.351E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.711E-06 | 1.247E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.711E-06 | 1.039E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.249E-06 | 1.068E-03 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.543E-06 | 1.019E-03 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 3.844E-06 | 9.823E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.182E-06 | 9.619E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.083E-06 | 1.063E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 8.703E-07 | 2.126E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.093E-06 | 1.335E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.142E-06 | 9.303E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.3E-06 | 7.938E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.3E-06 | 6.35E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.305E-06 | 5.314E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.593E-06 | 5.559E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.721E-06 | 5.256E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.072E-06 | 5.625E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.436E-06 | 5.95E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 2.818E-06 | 6.258E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 8.703E-07 | 2.126E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.093E-06 | 1.335E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.142E-06 | 9.303E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.3E-06 | 7.938E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.3E-06 | 6.35E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.305E-06 | 5.314E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.593E-06 | 5.559E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.721E-06 | 5.256E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.072E-06 | 5.625E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.436E-06 | 5.95E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 2.818E-06 | 6.258E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 9.918E-07 | 2.386E-03 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 9.918E-07 | 1.193E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.306E-06 | 1.048E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.365E-06 | 8.212E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.553E-06 | 7.474E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.553E-06 | 6.229E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.903E-06 | 6.543E-04 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 2.057E-06 | 6.187E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 2.476E-06 | 6.62E-04 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 2.775E-06 | 6.678E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 3.367E-06 | 7.365E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.831E-06 | 4.212E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.831E-06 | 2.106E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.236E-06 | 1.714E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.349E-06 | 1.351E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.711E-06 | 1.247E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.711E-06 | 1.039E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.249E-06 | 1.068E-03 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.543E-06 | 1.019E-03 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 3.844E-06 | 9.823E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.182E-06 | 9.619E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.083E-06 | 1.063E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.831E-06 | 4.212E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.831E-06 | 2.106E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.236E-06 | 1.714E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.349E-06 | 1.351E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.711E-06 | 1.247E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.711E-06 | 1.039E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.249E-06 | 1.068E-03 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.543E-06 | 1.019E-03 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 3.844E-06 | 9.823E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.182E-06 | 9.619E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.083E-06 | 1.063E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.831E-06 | 4.212E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.831E-06 | 2.106E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.236E-06 | 1.714E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.349E-06 | 1.351E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.711E-06 | 1.247E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.711E-06 | 1.039E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.249E-06 | 1.068E-03 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.543E-06 | 1.019E-03 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 3.844E-06 | 9.823E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.182E-06 | 9.619E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.083E-06 | 1.063E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.831E-06 | 4.212E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.831E-06 | 2.106E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.236E-06 | 1.714E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.349E-06 | 1.351E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.711E-06 | 1.247E-03 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.711E-06 | 1.039E-03 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.249E-06 | 1.068E-03 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.543E-06 | 1.019E-03 |
|---|
| regulation of focal adhesion formation | GO:0051893 | | 3.844E-06 | 9.823E-04 |
|---|
| regulation of ligase activity | GO:0051340 | | 4.182E-06 | 9.619E-04 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 5.083E-06 | 1.063E-03 |
|---|
