Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 9277-11-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1640 | 6.364e-03 | 1.740e-03 | 4.050e-02 |
|---|
| IPC-NIBC-129 | 0.2192 | 7.585e-02 | 6.430e-02 | 3.460e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2683 | 2.193e-02 | 1.531e-02 | 2.412e-01 |
|---|
| Loi_GPL570 | 0.2400 | 7.019e-02 | 9.057e-02 | 2.926e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1865 | 1.300e-02 | 6.983e-03 | 1.780e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3095 | 3.639e-01 | 2.842e-01 | 8.979e-01 |
|---|
| Schmidt | 0.2372 | 2.663e-02 | 2.826e-02 | 1.710e-01 |
|---|
| Sotiriou | 0.2663 | 7.913e-02 | 2.996e-02 | 4.939e-01 |
|---|
| Wang | 0.0908 | 2.968e-01 | 3.141e-01 | 6.186e-01 |
|---|
| Zhang | 0.1306 | 9.171e-03 | 4.622e-03 | 4.355e-02 |
|---|
Expression data for subnetwork 9277-11-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 9277-11-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cdc2 |   | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| wdr46 | | 1 | 90 | 231 | 234 | -0.021 | 0.133 | 0.157 | 0.041 | 0.090 | 0.124 | 0.108 | 0.118 | -0.089 | -0.042 |
|---|
| krt18 | | 13 | 12 | 99 | 67 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | 0.086 | -0.114 |
|---|
| troap | | 4 | 27 | 167 | 139 | 0.078 | 0.179 | 0.137 | 0.149 | 0.119 | 0.144 | 0.284 | 0.117 | 0.050 | 0.242 |
|---|
| bysl | | 4 | 27 | 167 | 139 | 0.097 | 0.204 | 0.042 | 0.257 | 0.107 | 0.316 | 0.233 | 0.106 | -0.015 | -0.010 |
|---|
GO Enrichment output for subnetwork 9277-11-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 |  | 2.096E-05 | 0.0482154 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.947E-04 | 0.22393417 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.487E-04 | 0.19066026 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.569E-04 | 0.14773349 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.824E-04 | 0.12992478 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.824E-04 | 0.10827065 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.183E-04 | 0.10459163 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.371E-04 | 0.09690306 |
|---|
| regulation of ligase activity | GO:0051340 | | 3.761E-04 | 0.0961147 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 4.279E-04 | 0.09841056 |
|---|
| Golgi vesicle transport | GO:0048193 | | 4.829E-04 | 0.10097536 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 9.303E-07 | 2.273E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 9.303E-07 | 1.136E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.22E-05 | 9.938E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 8.058E-05 | 0.04921503 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.002E-04 | 0.04897202 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.032E-04 | 0.0420235 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.124E-04 | 0.03923119 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.124E-04 | 0.03432729 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.286E-04 | 0.0349105 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.354E-04 | 0.03307639 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.531E-04 | 0.03400295 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 9.719E-07 | 2.338E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 9.719E-07 | 1.169E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.275E-05 | 0.01022506 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 7.873E-05 | 0.04735708 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.047E-04 | 0.05039015 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.078E-04 | 0.04324049 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.174E-04 | 0.04036754 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.174E-04 | 0.0353216 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.344E-04 | 0.03592202 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.415E-04 | 0.03403489 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.6E-04 | 0.03498862 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 9.303E-07 | 2.273E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 9.303E-07 | 1.136E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.22E-05 | 9.938E-03 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 8.058E-05 | 0.04921503 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.002E-04 | 0.04897202 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.032E-04 | 0.0420235 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.124E-04 | 0.03923119 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.124E-04 | 0.03432729 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.286E-04 | 0.0349105 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.354E-04 | 0.03307639 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.531E-04 | 0.03400295 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 9.719E-07 | 2.338E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 9.719E-07 | 1.169E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.275E-05 | 0.01022506 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 7.873E-05 | 0.04735708 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.047E-04 | 0.05039015 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.078E-04 | 0.04324049 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.174E-04 | 0.04036754 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.174E-04 | 0.0353216 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.344E-04 | 0.03592202 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.415E-04 | 0.03403489 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.6E-04 | 0.03498862 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 9.719E-07 | 2.338E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 9.719E-07 | 1.169E-03 |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 1.275E-05 | 0.01022506 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 7.873E-05 | 0.04735708 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.047E-04 | 0.05039015 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.078E-04 | 0.04324049 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.174E-04 | 0.04036754 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.174E-04 | 0.0353216 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.344E-04 | 0.03592202 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 1.415E-04 | 0.03403489 |
|---|
| regulation of ligase activity | GO:0051340 | | 1.6E-04 | 0.03498862 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.096E-05 | 0.0482154 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.947E-04 | 0.22393417 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.487E-04 | 0.19066026 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.569E-04 | 0.14773349 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.824E-04 | 0.12992478 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.824E-04 | 0.10827065 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.183E-04 | 0.10459163 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.371E-04 | 0.09690306 |
|---|
| regulation of ligase activity | GO:0051340 | | 3.761E-04 | 0.0961147 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 4.279E-04 | 0.09841056 |
|---|
| Golgi vesicle transport | GO:0048193 | | 4.829E-04 | 0.10097536 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.096E-05 | 0.0482154 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.947E-04 | 0.22393417 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.487E-04 | 0.19066026 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.569E-04 | 0.14773349 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.824E-04 | 0.12992478 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.824E-04 | 0.10827065 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.183E-04 | 0.10459163 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.371E-04 | 0.09690306 |
|---|
| regulation of ligase activity | GO:0051340 | | 3.761E-04 | 0.0961147 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 4.279E-04 | 0.09841056 |
|---|
| Golgi vesicle transport | GO:0048193 | | 4.829E-04 | 0.10097536 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.096E-05 | 0.0482154 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.947E-04 | 0.22393417 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.487E-04 | 0.19066026 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.569E-04 | 0.14773349 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.824E-04 | 0.12992478 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.824E-04 | 0.10827065 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.183E-04 | 0.10459163 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.371E-04 | 0.09690306 |
|---|
| regulation of ligase activity | GO:0051340 | | 3.761E-04 | 0.0961147 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 4.279E-04 | 0.09841056 |
|---|
| Golgi vesicle transport | GO:0048193 | | 4.829E-04 | 0.10097536 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| post-Golgi vesicle-mediated transport | GO:0006892 | | 2.096E-05 | 0.0482154 |
|---|
| cytokine-mediated signaling pathway | GO:0019221 | | 1.947E-04 | 0.22393417 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 2.487E-04 | 0.19066026 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 2.569E-04 | 0.14773349 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.824E-04 | 0.12992478 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.824E-04 | 0.10827065 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 3.183E-04 | 0.10459163 |
|---|
| regulation of ubiquitin-protein ligase activity | GO:0051438 | | 3.371E-04 | 0.09690306 |
|---|
| regulation of ligase activity | GO:0051340 | | 3.761E-04 | 0.0961147 |
|---|
| proteasomal ubiquitin-dependent protein catabolic process | GO:0043161 | | 4.279E-04 | 0.09841056 |
|---|
| Golgi vesicle transport | GO:0048193 | | 4.829E-04 | 0.10097536 |
|---|
