Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 9276-11-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.2141 | 5.969e-03 | 1.594e-03 | 3.846e-02 |
|---|
| IPC-NIBC-129 | 0.2276 | 6.126e-02 | 5.045e-02 | 2.879e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2713 | 1.859e-02 | 1.261e-02 | 2.113e-01 |
|---|
| Loi_GPL570 | 0.2569 | 1.143e-01 | 1.416e-01 | 4.162e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1300 | 1.736e-03 | 4.550e-04 | 1.283e-02 |
|---|
| Pawitan_GPL96-GPL97 | 0.2335 | 1.065e-01 | 5.901e-02 | 5.154e-01 |
|---|
| Schmidt | 0.2003 | 1.385e-02 | 1.492e-02 | 9.730e-02 |
|---|
| Sotiriou | 0.3075 | 1.933e-01 | 1.069e-01 | 7.810e-01 |
|---|
| Wang | 0.2481 | 2.073e-02 | 1.126e-02 | 9.016e-02 |
|---|
| Zhang | 0.2490 | 3.272e-02 | 1.921e-02 | 1.207e-01 |
|---|
Expression data for subnetwork 9276-11-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 9276-11-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| pcp4 |   | 5 | 20 | 35 | 25 | 0.022 | 0.163 | 0.112 | 0.140 | 0.114 | -0.002 | 0.096 | 0.117 | 0.104 | 0.109 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
| calm1 | | 16 | 10 | 35 | 19 | 0.038 | 0.023 | 0.171 | 0.277 | 0.113 | 0.007 | 0.171 | 0.112 | 0.087 | 0.162 |
|---|
| sp1 | | 31 | 5 | 16 | 8 | 0.054 | 0.186 | 0.147 | 0.242 | 0.125 | 0.202 | 0.284 | 0.227 | 0.194 | 0.091 |
|---|
| hmmr | | 10 | 14 | 35 | 23 | 0.112 | 0.310 | 0.147 | 0.127 | 0.145 | 0.221 | 0.179 | 0.233 | 0.227 | 0.144 |
|---|
| pold1 | | 2 | 53 | 89 | 81 | 0.069 | 0.107 | 0.160 | -0.033 | 0.102 | 0.121 | 0.144 | 0.148 | -0.048 | 0.006 |
|---|
| copb2 | | 1 | 90 | 93 | 102 | 0.076 | 0.119 | 0.040 | -0.111 | 0.053 | 0.163 | 0.122 | -0.019 | 0.152 | 0.068 |
|---|
| rgs4 | | 2 | 53 | 84 | 76 | 0.135 | 0.121 | 0.127 | 0.053 | 0.072 | 0.007 | 0.015 | 0.035 | 0.201 | 0.113 |
|---|
GO Enrichment output for subnetwork 9276-11-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 |  | 9.995E-06 | 0.02298776 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.266E-05 | 0.01455722 |
|---|
| response to UV | GO:0009411 | | 1.353E-05 | 0.01037521 |
|---|
| establishment of organelle localization | GO:0051656 | | 1.963E-05 | 0.01128498 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.096E-05 | 9.643E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 2.793E-05 | 0.010708 |
|---|
| S phase | GO:0051320 | | 2.793E-05 | 9.178E-03 |
|---|
| organelle localization | GO:0051640 | | 3.337E-05 | 9.594E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 4.484E-05 | 0.01145886 |
|---|
| Golgi vesicle budding | GO:0048194 | | 5.477E-05 | 0.01259705 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.892E-05 | 0.01859143 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 4.001E-06 | 9.773E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 4.001E-06 | 4.887E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.016E-06 | 3.27E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 5.998E-06 | 3.664E-03 |
|---|
| response to UV | GO:0009411 | | 6.074E-06 | 2.968E-03 |
|---|
| establishment of organelle localization | GO:0051656 | | 7.514E-06 | 3.059E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.119E-05 | 3.905E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 1.438E-05 | 4.391E-03 |
|---|
| S phase | GO:0051320 | | 1.438E-05 | 3.903E-03 |
|---|
| organelle localization | GO:0051640 | | 1.489E-05 | 3.637E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 1.797E-05 | 3.99E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 4.625E-06 | 0.01112725 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 4.625E-06 | 5.564E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.952E-06 | 3.972E-03 |
|---|
| response to UV | GO:0009411 | | 6.692E-06 | 4.025E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 6.934E-06 | 3.337E-03 |
|---|
| establishment of organelle localization | GO:0051656 | | 9.262E-06 | 3.714E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.293E-05 | 4.445E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 1.662E-05 | 4.999E-03 |
|---|
| S phase | GO:0051320 | | 1.662E-05 | 4.443E-03 |
|---|
| organelle localization | GO:0051640 | | 1.835E-05 | 4.414E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 2.077E-05 | 4.542E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 4.001E-06 | 9.773E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 4.001E-06 | 4.887E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.016E-06 | 3.27E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 5.998E-06 | 3.664E-03 |
|---|
| response to UV | GO:0009411 | | 6.074E-06 | 2.968E-03 |
|---|
| establishment of organelle localization | GO:0051656 | | 7.514E-06 | 3.059E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.119E-05 | 3.905E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 1.438E-05 | 4.391E-03 |
|---|
| S phase | GO:0051320 | | 1.438E-05 | 3.903E-03 |
|---|
| organelle localization | GO:0051640 | | 1.489E-05 | 3.637E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 1.797E-05 | 3.99E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 4.625E-06 | 0.01112725 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 4.625E-06 | 5.564E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.952E-06 | 3.972E-03 |
|---|
| response to UV | GO:0009411 | | 6.692E-06 | 4.025E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 6.934E-06 | 3.337E-03 |
|---|
| establishment of organelle localization | GO:0051656 | | 9.262E-06 | 3.714E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.293E-05 | 4.445E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 1.662E-05 | 4.999E-03 |
|---|
| S phase | GO:0051320 | | 1.662E-05 | 4.443E-03 |
|---|
| organelle localization | GO:0051640 | | 1.835E-05 | 4.414E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 2.077E-05 | 4.542E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 4.625E-06 | 0.01112725 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 4.625E-06 | 5.564E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.952E-06 | 3.972E-03 |
|---|
| response to UV | GO:0009411 | | 6.692E-06 | 4.025E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 6.934E-06 | 3.337E-03 |
|---|
| establishment of organelle localization | GO:0051656 | | 9.262E-06 | 3.714E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.293E-05 | 4.445E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 1.662E-05 | 4.999E-03 |
|---|
| S phase | GO:0051320 | | 1.662E-05 | 4.443E-03 |
|---|
| organelle localization | GO:0051640 | | 1.835E-05 | 4.414E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 2.077E-05 | 4.542E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 9.995E-06 | 0.02298776 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.266E-05 | 0.01455722 |
|---|
| response to UV | GO:0009411 | | 1.353E-05 | 0.01037521 |
|---|
| establishment of organelle localization | GO:0051656 | | 1.963E-05 | 0.01128498 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.096E-05 | 9.643E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 2.793E-05 | 0.010708 |
|---|
| S phase | GO:0051320 | | 2.793E-05 | 9.178E-03 |
|---|
| organelle localization | GO:0051640 | | 3.337E-05 | 9.594E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 4.484E-05 | 0.01145886 |
|---|
| Golgi vesicle budding | GO:0048194 | | 5.477E-05 | 0.01259705 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.892E-05 | 0.01859143 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 9.995E-06 | 0.02298776 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.266E-05 | 0.01455722 |
|---|
| response to UV | GO:0009411 | | 1.353E-05 | 0.01037521 |
|---|
| establishment of organelle localization | GO:0051656 | | 1.963E-05 | 0.01128498 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.096E-05 | 9.643E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 2.793E-05 | 0.010708 |
|---|
| S phase | GO:0051320 | | 2.793E-05 | 9.178E-03 |
|---|
| organelle localization | GO:0051640 | | 3.337E-05 | 9.594E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 4.484E-05 | 0.01145886 |
|---|
| Golgi vesicle budding | GO:0048194 | | 5.477E-05 | 0.01259705 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.892E-05 | 0.01859143 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 9.995E-06 | 0.02298776 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.266E-05 | 0.01455722 |
|---|
| response to UV | GO:0009411 | | 1.353E-05 | 0.01037521 |
|---|
| establishment of organelle localization | GO:0051656 | | 1.963E-05 | 0.01128498 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.096E-05 | 9.643E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 2.793E-05 | 0.010708 |
|---|
| S phase | GO:0051320 | | 2.793E-05 | 9.178E-03 |
|---|
| organelle localization | GO:0051640 | | 3.337E-05 | 9.594E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 4.484E-05 | 0.01145886 |
|---|
| Golgi vesicle budding | GO:0048194 | | 5.477E-05 | 0.01259705 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.892E-05 | 0.01859143 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| maintenance of fidelity during DNA-dependent DNA replication | GO:0045005 | | 9.995E-06 | 0.02298776 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.266E-05 | 0.01455722 |
|---|
| response to UV | GO:0009411 | | 1.353E-05 | 0.01037521 |
|---|
| establishment of organelle localization | GO:0051656 | | 1.963E-05 | 0.01128498 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.096E-05 | 9.643E-03 |
|---|
| DNA synthesis during DNA repair | GO:0000731 | | 2.793E-05 | 0.010708 |
|---|
| S phase | GO:0051320 | | 2.793E-05 | 9.178E-03 |
|---|
| organelle localization | GO:0051640 | | 3.337E-05 | 9.594E-03 |
|---|
| COPI coating of Golgi vesicle | GO:0048205 | | 4.484E-05 | 0.01145886 |
|---|
| Golgi vesicle budding | GO:0048194 | | 5.477E-05 | 0.01259705 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 8.892E-05 | 0.01859143 |
|---|
