Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 9134-10-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1475 | 2.686e-02 | 1.239e-02 | 1.259e-01 |
|---|
| IPC-NIBC-129 | 0.2122 | 1.800e-01 | 1.701e-01 | 6.463e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.1994 | 2.520e-02 | 1.801e-02 | 2.687e-01 |
|---|
| Loi_GPL570 | 0.1700 | 7.205e-02 | 9.276e-02 | 2.984e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1864 | 2.443e-02 | 1.611e-02 | 3.309e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.2991 | 6.653e-02 | 3.228e-02 | 3.791e-01 |
|---|
| Schmidt | 0.2353 | 3.451e-02 | 3.641e-02 | 2.113e-01 |
|---|
| Sotiriou | 0.2498 | 7.927e-02 | 3.004e-02 | 4.945e-01 |
|---|
| Wang | 0.1715 | 7.789e-02 | 6.152e-02 | 2.514e-01 |
|---|
| Zhang | 0.2922 | 1.094e-02 | 5.629e-03 | 5.029e-02 |
|---|
Expression data for subnetwork 9134-10-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 9134-10-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cks2 |   | 4 | 27 | 151 | 122 | 0.050 | 0.233 | 0.170 | 0.103 | 0.186 | 0.167 | 0.263 | 0.151 | 0.145 | 0.284 |
|---|
| cks1b | | 1 | 90 | 214 | 219 | 0.095 | 0.222 | 0.107 | -0.008 | 0.107 | 0.277 | 0.185 | 0.132 | 0.060 | 0.128 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| cdk2 | | 3 | 39 | 104 | 93 | 0.102 | 0.241 | 0.092 | 0.008 | 0.100 | 0.236 | 0.154 | 0.122 | 0.186 | 0.046 |
|---|
| ccne2 | | 1 | 90 | 214 | 219 | 0.072 | 0.135 | 0.030 | 0.144 | 0.103 | 0.114 | 0.198 | 0.113 | -0.003 | 0.114 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 9134-10-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 |  | 4.305E-11 | 9.902E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 2.942E-06 | 3.384E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 8.231E-06 | 4.733E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 8.231E-06 | 3.786E-03 |
|---|
| acid secretion | GO:0046717 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 3.519E-05 | 7.358E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.219E-12 | 5.421E-09 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 1.068E-06 | 1.305E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.993E-06 | 1.623E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 1.993E-06 | 1.217E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.405E-06 | 1.175E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 2.562E-06 | 1.043E-03 |
|---|
| acid secretion | GO:0046717 | | 3.913E-06 | 1.366E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 8.531E-06 | 2.605E-03 |
|---|
| long-chain fatty acid transport | GO:0015909 | | 1.087E-05 | 2.952E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 1.215E-05 | 2.968E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.35E-05 | 2.998E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.075E-12 | 1.221E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 9.918E-07 | 1.193E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 2.226E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 2.775E-06 | 1.669E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 3.568E-06 | 1.717E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.44E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.355E-03 |
|---|
| acid secretion | GO:0046717 | | 5.449E-06 | 1.639E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 1.188E-05 | 3.175E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 1.188E-05 | 2.858E-03 |
|---|
| long-chain fatty acid transport | GO:0015909 | | 1.514E-05 | 3.311E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 2.219E-12 | 5.421E-09 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 1.068E-06 | 1.305E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.993E-06 | 1.623E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 1.993E-06 | 1.217E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 2.405E-06 | 1.175E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 2.562E-06 | 1.043E-03 |
|---|
| acid secretion | GO:0046717 | | 3.913E-06 | 1.366E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 8.531E-06 | 2.605E-03 |
|---|
| long-chain fatty acid transport | GO:0015909 | | 1.087E-05 | 2.952E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 1.215E-05 | 2.968E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 1.35E-05 | 2.998E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.075E-12 | 1.221E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 9.918E-07 | 1.193E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 2.226E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 2.775E-06 | 1.669E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 3.568E-06 | 1.717E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.44E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.355E-03 |
|---|
| acid secretion | GO:0046717 | | 5.449E-06 | 1.639E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 1.188E-05 | 3.175E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 1.188E-05 | 2.858E-03 |
|---|
| long-chain fatty acid transport | GO:0015909 | | 1.514E-05 | 3.311E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 5.075E-12 | 1.221E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 9.918E-07 | 1.193E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 2.775E-06 | 2.226E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 2.775E-06 | 1.669E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 3.568E-06 | 1.717E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.59E-06 | 1.44E-03 |
|---|
| interphase | GO:0051325 | | 3.943E-06 | 1.355E-03 |
|---|
| acid secretion | GO:0046717 | | 5.449E-06 | 1.639E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 1.188E-05 | 3.175E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 1.188E-05 | 2.858E-03 |
|---|
| long-chain fatty acid transport | GO:0015909 | | 1.514E-05 | 3.311E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.305E-11 | 9.902E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 2.942E-06 | 3.384E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 8.231E-06 | 4.733E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 8.231E-06 | 3.786E-03 |
|---|
| acid secretion | GO:0046717 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 3.519E-05 | 7.358E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.305E-11 | 9.902E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 2.942E-06 | 3.384E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 8.231E-06 | 4.733E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 8.231E-06 | 3.786E-03 |
|---|
| acid secretion | GO:0046717 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 3.519E-05 | 7.358E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.305E-11 | 9.902E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 2.942E-06 | 3.384E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 8.231E-06 | 4.733E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 8.231E-06 | 3.786E-03 |
|---|
| acid secretion | GO:0046717 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 3.519E-05 | 7.358E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 4.305E-11 | 9.902E-08 |
|---|
| traversing start control point of mitotic cell cycle | GO:0007089 | | 2.942E-06 | 3.384E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.175E-06 | 4.734E-03 |
|---|
| regulation of vascular permeability | GO:0043114 | | 8.231E-06 | 4.733E-03 |
|---|
| icosanoid secretion | GO:0032309 | | 8.231E-06 | 3.786E-03 |
|---|
| acid secretion | GO:0046717 | | 1.058E-05 | 4.055E-03 |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.345E-05 | 4.42E-03 |
|---|
| interphase | GO:0051325 | | 1.442E-05 | 4.145E-03 |
|---|
| G1 phase of mitotic cell cycle | GO:0000080 | | 2.67E-05 | 6.824E-03 |
|---|
| cellular response to unfolded protein | GO:0034620 | | 3.519E-05 | 8.094E-03 |
|---|
| DNA replication initiation | GO:0006270 | | 3.519E-05 | 7.358E-03 |
|---|
