Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 9088-10-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1458	1.449e-02	5.363e-03	7.811e-02
IPC-NIBC-129	0.2921	3.580e-02	2.733e-02	1.742e-01
Ivshina_GPL96-GPL97	0.2291	5.099e-03	2.746e-03	6.644e-02
Loi_GPL570	0.2991	6.292e-02	8.190e-02	2.692e-01
Loi_GPL96-GPL97	0.1493	2.602e-02	1.750e-02	3.497e-01
Pawitan_GPL96-GPL97	0.2480	2.508e-02	9.231e-03	1.794e-01
Schmidt	0.2454	4.129e-02	4.340e-02	2.436e-01
Sotiriou	0.2384	1.430e-01	6.965e-02	6.851e-01
Wang	0.1151	2.003e-01	1.975e-01	4.853e-01
Zhang	0.3798	2.574e-02	1.467e-02	9.994e-02

Expression data for subnetwork 9088-10-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 9088-10-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
pin1		4	27	26	20	-0.012	0.181	0.133	0.270	0.112	0.072	0.063	0.161	0.033	0.259
tsc1		31	5	26	15	0.049	0.012	-0.055	0.072	0.055	-0.196	0.006	0.010	0.043	-0.007
cdc2		99	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.067	0.297
pkmyt1		4	27	26	20	0.219	0.222	0.151	0.190	0.092	0.202	0.156	0.061	0.117	0.288

GO Enrichment output for subnetwork 9088-10-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		5.535E-07	1.273E-03
negative regulation of protein ubiquitination	GO:0031397		9.812E-07	1.128E-03
positive regulation of Rho GTPase activity	GO:0032321		9.812E-07	7.523E-04
regulation of cell cycle process	GO:0010564		1.897E-06	1.091E-03
regulation of focal adhesion formation	GO:0051893		2.06E-06	9.476E-04
positive regulation of Ras GTPase activity	GO:0032320		2.746E-06	1.053E-03
positive regulation of GTPase activity	GO:0043547		3.53E-06	1.16E-03
regulation of phosphoprotein phosphatase activity	GO:0043666		3.53E-06	1.015E-03
regulation of stress fiber formation	GO:0051492		3.53E-06	9.022E-04
regulation of phosphatase activity	GO:0010921		4.412E-06	1.015E-03
regulation of actin filament bundle formation	GO:0032231		4.412E-06	9.225E-04

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		1.848E-07	4.514E-04
negative regulation of protein ubiquitination	GO:0031397		3.324E-07	4.06E-04
activation of Ras GTPase activity	GO:0032856		4.985E-07	4.059E-04
regulation of cell cycle process	GO:0010564		5.454E-07	3.331E-04
regulation of focal adhesion formation	GO:0051893		9.303E-07	4.546E-04
regulation of phosphoprotein phosphatase activity	GO:0043666		1.196E-06	4.87E-04
regulation of phosphatase activity	GO:0010921		1.495E-06	5.217E-04
regulation of stress fiber formation	GO:0051492		1.495E-06	4.565E-04
positive regulation of Rho GTPase activity	GO:0032321		1.827E-06	4.959E-04
regulation of actin filament bundle formation	GO:0032231		1.827E-06	4.463E-04
positive regulation of Ras GTPase activity	GO:0032320		3.022E-06	6.711E-04

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		3.035E-07	7.302E-04
negative regulation of protein ubiquitination	GO:0031397		4.629E-07	5.569E-04
activation of Ras GTPase activity	GO:0032856		4.629E-07	3.713E-04
regulation of cell cycle process	GO:0010564		8.954E-07	5.386E-04
regulation of focal adhesion formation	GO:0051893		1.296E-06	6.235E-04
regulation of phosphoprotein phosphatase activity	GO:0043666		1.666E-06	6.68E-04
regulation of phosphatase activity	GO:0010921		2.082E-06	7.156E-04
regulation of stress fiber formation	GO:0051492		2.082E-06	6.261E-04
positive regulation of Rho GTPase activity	GO:0032321		2.082E-06	5.566E-04
regulation of actin filament bundle formation	GO:0032231		2.544E-06	6.122E-04
positive regulation of Ras GTPase activity	GO:0032320		3.607E-06	7.891E-04

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		1.848E-07	4.514E-04
negative regulation of protein ubiquitination	GO:0031397		3.324E-07	4.06E-04
activation of Ras GTPase activity	GO:0032856		4.985E-07	4.059E-04
regulation of cell cycle process	GO:0010564		5.454E-07	3.331E-04
regulation of focal adhesion formation	GO:0051893		9.303E-07	4.546E-04
regulation of phosphoprotein phosphatase activity	GO:0043666		1.196E-06	4.87E-04
regulation of phosphatase activity	GO:0010921		1.495E-06	5.217E-04
regulation of stress fiber formation	GO:0051492		1.495E-06	4.565E-04
positive regulation of Rho GTPase activity	GO:0032321		1.827E-06	4.959E-04
regulation of actin filament bundle formation	GO:0032231		1.827E-06	4.463E-04
positive regulation of Ras GTPase activity	GO:0032320		3.022E-06	6.711E-04

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		3.035E-07	7.302E-04
negative regulation of protein ubiquitination	GO:0031397		4.629E-07	5.569E-04
activation of Ras GTPase activity	GO:0032856		4.629E-07	3.713E-04
regulation of cell cycle process	GO:0010564		8.954E-07	5.386E-04
regulation of focal adhesion formation	GO:0051893		1.296E-06	6.235E-04
regulation of phosphoprotein phosphatase activity	GO:0043666		1.666E-06	6.68E-04
regulation of phosphatase activity	GO:0010921		2.082E-06	7.156E-04
regulation of stress fiber formation	GO:0051492		2.082E-06	6.261E-04
positive regulation of Rho GTPase activity	GO:0032321		2.082E-06	5.566E-04
regulation of actin filament bundle formation	GO:0032231		2.544E-06	6.122E-04
positive regulation of Ras GTPase activity	GO:0032320		3.607E-06	7.891E-04

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		3.035E-07	7.302E-04
negative regulation of protein ubiquitination	GO:0031397		4.629E-07	5.569E-04
activation of Ras GTPase activity	GO:0032856		4.629E-07	3.713E-04
regulation of cell cycle process	GO:0010564		8.954E-07	5.386E-04
regulation of focal adhesion formation	GO:0051893		1.296E-06	6.235E-04
regulation of phosphoprotein phosphatase activity	GO:0043666		1.666E-06	6.68E-04
regulation of phosphatase activity	GO:0010921		2.082E-06	7.156E-04
regulation of stress fiber formation	GO:0051492		2.082E-06	6.261E-04
positive regulation of Rho GTPase activity	GO:0032321		2.082E-06	5.566E-04
regulation of actin filament bundle formation	GO:0032231		2.544E-06	6.122E-04
positive regulation of Ras GTPase activity	GO:0032320		3.607E-06	7.891E-04

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		5.535E-07	1.273E-03
negative regulation of protein ubiquitination	GO:0031397		9.812E-07	1.128E-03
positive regulation of Rho GTPase activity	GO:0032321		9.812E-07	7.523E-04
regulation of cell cycle process	GO:0010564		1.897E-06	1.091E-03
regulation of focal adhesion formation	GO:0051893		2.06E-06	9.476E-04
positive regulation of Ras GTPase activity	GO:0032320		2.746E-06	1.053E-03
positive regulation of GTPase activity	GO:0043547		3.53E-06	1.16E-03
regulation of phosphoprotein phosphatase activity	GO:0043666		3.53E-06	1.015E-03
regulation of stress fiber formation	GO:0051492		3.53E-06	9.022E-04
regulation of phosphatase activity	GO:0010921		4.412E-06	1.015E-03
regulation of actin filament bundle formation	GO:0032231		4.412E-06	9.225E-04

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		5.535E-07	1.273E-03
negative regulation of protein ubiquitination	GO:0031397		9.812E-07	1.128E-03
positive regulation of Rho GTPase activity	GO:0032321		9.812E-07	7.523E-04
regulation of cell cycle process	GO:0010564		1.897E-06	1.091E-03
regulation of focal adhesion formation	GO:0051893		2.06E-06	9.476E-04
positive regulation of Ras GTPase activity	GO:0032320		2.746E-06	1.053E-03
positive regulation of GTPase activity	GO:0043547		3.53E-06	1.16E-03
regulation of phosphoprotein phosphatase activity	GO:0043666		3.53E-06	1.015E-03
regulation of stress fiber formation	GO:0051492		3.53E-06	9.022E-04
regulation of phosphatase activity	GO:0010921		4.412E-06	1.015E-03
regulation of actin filament bundle formation	GO:0032231		4.412E-06	9.225E-04

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		5.535E-07	1.273E-03
negative regulation of protein ubiquitination	GO:0031397		9.812E-07	1.128E-03
positive regulation of Rho GTPase activity	GO:0032321		9.812E-07	7.523E-04
regulation of cell cycle process	GO:0010564		1.897E-06	1.091E-03
regulation of focal adhesion formation	GO:0051893		2.06E-06	9.476E-04
positive regulation of Ras GTPase activity	GO:0032320		2.746E-06	1.053E-03
positive regulation of GTPase activity	GO:0043547		3.53E-06	1.16E-03
regulation of phosphoprotein phosphatase activity	GO:0043666		3.53E-06	1.015E-03
regulation of stress fiber formation	GO:0051492		3.53E-06	9.022E-04
regulation of phosphatase activity	GO:0010921		4.412E-06	1.015E-03
regulation of actin filament bundle formation	GO:0032231		4.412E-06	9.225E-04

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
regulation of mitosis	GO:0007088		5.535E-07	1.273E-03
negative regulation of protein ubiquitination	GO:0031397		9.812E-07	1.128E-03
positive regulation of Rho GTPase activity	GO:0032321		9.812E-07	7.523E-04
regulation of cell cycle process	GO:0010564		1.897E-06	1.091E-03
regulation of focal adhesion formation	GO:0051893		2.06E-06	9.476E-04
positive regulation of Ras GTPase activity	GO:0032320		2.746E-06	1.053E-03
positive regulation of GTPase activity	GO:0043547		3.53E-06	1.16E-03
regulation of phosphoprotein phosphatase activity	GO:0043666		3.53E-06	1.015E-03
regulation of stress fiber formation	GO:0051492		3.53E-06	9.022E-04
regulation of phosphatase activity	GO:0010921		4.412E-06	1.015E-03
regulation of actin filament bundle formation	GO:0032231		4.412E-06	9.225E-04