Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 836-9-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1200 | 2.202e-02 | 9.466e-03 | 1.081e-01 |
|---|
| IPC-NIBC-129 | 0.1711 | 5.307e-02 | 4.284e-02 | 2.530e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2090 | 5.638e-02 | 4.599e-02 | 4.710e-01 |
|---|
| Loi_GPL570 | 0.2683 | 1.310e-01 | 1.605e-01 | 4.566e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1730 | 6.716e-02 | 5.964e-02 | 6.784e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3284 | 1.053e-01 | 5.814e-02 | 5.118e-01 |
|---|
| Schmidt | 0.1898 | 3.212e-02 | 3.395e-02 | 1.994e-01 |
|---|
| Sotiriou | 0.2544 | 9.821e-02 | 4.078e-02 | 5.621e-01 |
|---|
| Wang | 0.1788 | 6.879e-02 | 5.259e-02 | 2.293e-01 |
|---|
| Zhang | 0.2501 | 6.665e-03 | 3.236e-03 | 3.349e-02 |
|---|
Expression data for subnetwork 836-9-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 836-9-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| sp1 |   | 31 | 5 | 16 | 8 | 0.054 | 0.186 | 0.147 | 0.242 | 0.125 | 0.202 | 0.284 | 0.227 | 0.194 | 0.091 |
|---|
| rad51 | | 1 | 90 | 219 | 224 | 0.037 | 0.173 | 0.127 | 0.233 | 0.126 | 0.303 | 0.166 | 0.147 | 0.135 | 0.109 |
|---|
| pcna | | 39 | 3 | 8 | 3 | 0.096 | 0.202 | 0.109 | 0.180 | 0.118 | 0.256 | 0.151 | 0.059 | 0.162 | 0.123 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| casp3 | | 1 | 90 | 219 | 224 | -0.051 | 0.158 | 0.146 | 0.160 | 0.074 | 0.202 | 0.070 | 0.073 | 0.004 | 0.059 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 836-9-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 |  | 9.101E-07 | 2.093E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 2.981E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 2.125E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.068E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 1.746E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.067E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.772E-03 |
|---|
| meiosis | GO:0007126 | | 6.538E-06 | 1.88E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 6.868E-06 | 1.755E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 1.849E-07 | 4.517E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.785E-07 | 4.623E-04 |
|---|
| response to UV | GO:0009411 | | 5.734E-07 | 4.669E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 3.904E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 8.703E-07 | 4.252E-04 |
|---|
| mitotic recombination | GO:0006312 | | 8.703E-07 | 3.543E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 8.703E-07 | 3.037E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.305E-06 | 3.986E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 1.305E-06 | 3.543E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.305E-06 | 3.189E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 1.827E-06 | 4.057E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 2.797E-07 | 6.73E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 7.474E-04 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 6.742E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 6.311E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.212E-06 | 5.832E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 4.86E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 4.166E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 5.467E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 1.818E-06 | 4.859E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 4.373E-04 |
|---|
| meiosis | GO:0007126 | | 2.316E-06 | 5.067E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 1.849E-07 | 4.517E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 3.785E-07 | 4.623E-04 |
|---|
| response to UV | GO:0009411 | | 5.734E-07 | 4.669E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 6.393E-07 | 3.904E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 8.703E-07 | 4.252E-04 |
|---|
| mitotic recombination | GO:0006312 | | 8.703E-07 | 3.543E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 8.703E-07 | 3.037E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.305E-06 | 3.986E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 1.305E-06 | 3.543E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.305E-06 | 3.189E-04 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 1.827E-06 | 4.057E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 2.797E-07 | 6.73E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 7.474E-04 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 6.742E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 6.311E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.212E-06 | 5.832E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 4.86E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 4.166E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 5.467E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 1.818E-06 | 4.859E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 4.373E-04 |
|---|
| meiosis | GO:0007126 | | 2.316E-06 | 5.067E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 2.797E-07 | 6.73E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.213E-07 | 7.474E-04 |
|---|
| response to UV | GO:0009411 | | 8.406E-07 | 6.742E-04 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 1.049E-06 | 6.311E-04 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 1.212E-06 | 5.832E-04 |
|---|
| mitotic recombination | GO:0006312 | | 1.212E-06 | 4.86E-04 |
|---|
| B cell homeostasis | GO:0001782 | | 1.212E-06 | 4.166E-04 |
|---|
| neuron apoptosis | GO:0051402 | | 1.818E-06 | 5.467E-04 |
|---|
| establishment of spindle localization | GO:0051293 | | 1.818E-06 | 4.859E-04 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 1.818E-06 | 4.373E-04 |
|---|
| meiosis | GO:0007126 | | 2.316E-06 | 5.067E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 9.101E-07 | 2.093E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 2.981E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 2.125E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.068E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 1.746E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.067E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.772E-03 |
|---|
| meiosis | GO:0007126 | | 6.538E-06 | 1.88E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 6.868E-06 | 1.755E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 9.101E-07 | 2.093E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 2.981E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 2.125E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.068E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 1.746E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.067E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.772E-03 |
|---|
| meiosis | GO:0007126 | | 6.538E-06 | 1.88E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 6.868E-06 | 1.755E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 9.101E-07 | 2.093E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 2.981E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 2.125E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.068E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 1.746E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.067E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.772E-03 |
|---|
| meiosis | GO:0007126 | | 6.538E-06 | 1.88E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 6.868E-06 | 1.755E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| meiosis I | GO:0007127 | | 9.101E-07 | 2.093E-03 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 2.981E-03 |
|---|
| response to UV | GO:0009411 | | 2.772E-06 | 2.125E-03 |
|---|
| induction of apoptosis by oxidative stress | GO:0008631 | | 3.596E-06 | 2.068E-03 |
|---|
| regulation of cyclin-dependent protein kinase activity | GO:0000079 | | 3.796E-06 | 1.746E-03 |
|---|
| neuron apoptosis | GO:0051402 | | 5.392E-06 | 2.067E-03 |
|---|
| negative regulation of B cell activation | GO:0050869 | | 5.392E-06 | 1.772E-03 |
|---|
| meiosis | GO:0007126 | | 6.538E-06 | 1.88E-03 |
|---|
| meiotic cell cycle | GO:0051321 | | 6.868E-06 | 1.755E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.736E-03 |
|---|
| negative regulation of cyclin-dependent protein kinase activity | GO:0045736 | | 1.006E-05 | 2.103E-03 |
|---|
