Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 7534-9-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1913 | 1.305e-02 | 4.648e-03 | 7.191e-02 |
|---|
| IPC-NIBC-129 | 0.2363 | 8.267e-02 | 7.089e-02 | 3.715e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2341 | 1.563e-02 | 1.029e-02 | 1.831e-01 |
|---|
| Loi_GPL570 | 0.2331 | 1.371e-01 | 1.674e-01 | 4.706e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1924 | 4.400e-03 | 1.622e-03 | 4.803e-02 |
|---|
| Pawitan_GPL96-GPL97 | 0.3034 | 3.101e-01 | 2.318e-01 | 8.566e-01 |
|---|
| Schmidt | 0.1863 | 1.686e-02 | 1.808e-02 | 1.158e-01 |
|---|
| Sotiriou | 0.2951 | 7.194e-02 | 2.615e-02 | 4.650e-01 |
|---|
| Wang | 0.0550 | 5.156e-01 | 5.794e-01 | 8.269e-01 |
|---|
| Zhang | 0.1467 | 1.016e-02 | 5.184e-03 | 4.736e-02 |
|---|
Expression data for subnetwork 7534-9-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 7534-9-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cdc2 |   | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| stmn2 | | 19 | 8 | 32 | 18 | 0.057 | 0.106 | 0.005 | 0.052 | 0.110 | 0.006 | 0.034 | 0.103 | 0.075 | 0.113 |
|---|
| cdc25a | | 4 | 27 | 32 | 27 | -0.019 | 0.221 | 0.093 | 0.158 | 0.120 | 0.207 | 0.211 | 0.016 | 0.069 | 0.183 |
|---|
| krt18 | | 13 | 12 | 99 | 67 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | 0.086 | -0.114 |
|---|
| ywhaz | | 2 | 53 | 228 | 209 | 0.124 | 0.089 | 0.087 | 0.200 | 0.141 | 0.199 | 0.056 | 0.123 | -0.026 | 0.103 |
|---|
| cfl1 | | 2 | 53 | 228 | 209 | 0.216 | 0.134 | 0.083 | -0.084 | 0.142 | 0.229 | 0.174 | 0.188 | 0.021 | -0.025 |
|---|
GO Enrichment output for subnetwork 7534-9-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 |  | 4.085E-09 | 9.394E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.72E-08 | 7.729E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 2.275E-07 | 1.745E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 4.624E-07 | 2.659E-04 |
|---|
| sperm motility | GO:0030317 | | 8.193E-07 | 3.769E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.476E-06 | 5.657E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2E-06 | 6.572E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 2.411E-06 | 6.931E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 3.392E-06 | 8.67E-04 |
|---|
| neural plate development | GO:0001840 | | 5.947E-06 | 1.368E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.137E-05 | 4.468E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.479E-10 | 1.827E-06 |
|---|
| neural plate morphogenesis | GO:0001839 | | 7.479E-10 | 9.135E-07 |
|---|
| neural plate development | GO:0001840 | | 1.495E-09 | 1.218E-06 |
|---|
| establishment of cell polarity | GO:0030010 | | 1.642E-08 | 1.003E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.134E-08 | 1.043E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 4.176E-08 | 1.7E-05 |
|---|
| neural crest cell migration | GO:0001755 | | 6.081E-08 | 2.122E-05 |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.506E-07 | 4.599E-05 |
|---|
| neural crest cell development | GO:0014032 | | 1.933E-07 | 5.248E-05 |
|---|
| alditol metabolic process | GO:0019400 | | 1.933E-07 | 4.723E-05 |
|---|
| sperm motility | GO:0030317 | | 2.435E-07 | 5.407E-05 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.991E-10 | 1.923E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.281E-08 | 2.743E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 4.462E-08 | 3.578E-05 |
|---|
| alditol metabolic process | GO:0019400 | | 1.609E-07 | 9.678E-05 |
|---|
| sperm motility | GO:0030317 | | 1.828E-07 | 8.796E-05 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.935E-07 | 1.578E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.658E-07 | 1.945E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 8.435E-07 | 2.537E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 9.082E-07 | 2.428E-04 |
|---|
| neural plate development | GO:0001840 | | 2.005E-06 | 4.824E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.208E-06 | 9.205E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.479E-10 | 1.827E-06 |
|---|
| neural plate morphogenesis | GO:0001839 | | 7.479E-10 | 9.135E-07 |
|---|
| neural plate development | GO:0001840 | | 1.495E-09 | 1.218E-06 |
|---|
| establishment of cell polarity | GO:0030010 | | 1.642E-08 | 1.003E-05 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.134E-08 | 1.043E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 4.176E-08 | 1.7E-05 |
|---|
| neural crest cell migration | GO:0001755 | | 6.081E-08 | 2.122E-05 |
|---|
| positive regulation of cytoskeleton organization | GO:0051495 | | 1.506E-07 | 4.599E-05 |
|---|
| neural crest cell development | GO:0014032 | | 1.933E-07 | 5.248E-05 |
|---|
| alditol metabolic process | GO:0019400 | | 1.933E-07 | 4.723E-05 |
|---|
| sperm motility | GO:0030317 | | 2.435E-07 | 5.407E-05 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.991E-10 | 1.923E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.281E-08 | 2.743E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 4.462E-08 | 3.578E-05 |
|---|
| alditol metabolic process | GO:0019400 | | 1.609E-07 | 9.678E-05 |
|---|
| sperm motility | GO:0030317 | | 1.828E-07 | 8.796E-05 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.935E-07 | 1.578E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.658E-07 | 1.945E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 8.435E-07 | 2.537E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 9.082E-07 | 2.428E-04 |
|---|
| neural plate development | GO:0001840 | | 2.005E-06 | 4.824E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.208E-06 | 9.205E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 7.991E-10 | 1.923E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 2.281E-08 | 2.743E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 4.462E-08 | 3.578E-05 |
|---|
| alditol metabolic process | GO:0019400 | | 1.609E-07 | 9.678E-05 |
|---|
| sperm motility | GO:0030317 | | 1.828E-07 | 8.796E-05 |
|---|
| hexose biosynthetic process | GO:0019319 | | 3.935E-07 | 1.578E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 5.658E-07 | 1.945E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 8.435E-07 | 2.537E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 9.082E-07 | 2.428E-04 |
|---|
| neural plate development | GO:0001840 | | 2.005E-06 | 4.824E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 4.208E-06 | 9.205E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.085E-09 | 9.394E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.72E-08 | 7.729E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 2.275E-07 | 1.745E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 4.624E-07 | 2.659E-04 |
|---|
| sperm motility | GO:0030317 | | 8.193E-07 | 3.769E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.476E-06 | 5.657E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2E-06 | 6.572E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 2.411E-06 | 6.931E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 3.392E-06 | 8.67E-04 |
|---|
| neural plate development | GO:0001840 | | 5.947E-06 | 1.368E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.137E-05 | 4.468E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.085E-09 | 9.394E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.72E-08 | 7.729E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 2.275E-07 | 1.745E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 4.624E-07 | 2.659E-04 |
|---|
| sperm motility | GO:0030317 | | 8.193E-07 | 3.769E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.476E-06 | 5.657E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2E-06 | 6.572E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 2.411E-06 | 6.931E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 3.392E-06 | 8.67E-04 |
|---|
| neural plate development | GO:0001840 | | 5.947E-06 | 1.368E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.137E-05 | 4.468E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.085E-09 | 9.394E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.72E-08 | 7.729E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 2.275E-07 | 1.745E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 4.624E-07 | 2.659E-04 |
|---|
| sperm motility | GO:0030317 | | 8.193E-07 | 3.769E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.476E-06 | 5.657E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2E-06 | 6.572E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 2.411E-06 | 6.931E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 3.392E-06 | 8.67E-04 |
|---|
| neural plate development | GO:0001840 | | 5.947E-06 | 1.368E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.137E-05 | 4.468E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| polyol catabolic process | GO:0046174 | | 4.085E-09 | 9.394E-06 |
|---|
| cellular carbohydrate catabolic process | GO:0044275 | | 6.72E-08 | 7.729E-05 |
|---|
| fructose metabolic process | GO:0006000 | | 2.275E-07 | 1.745E-04 |
|---|
| alditol metabolic process | GO:0019400 | | 4.624E-07 | 2.659E-04 |
|---|
| sperm motility | GO:0030317 | | 8.193E-07 | 3.769E-04 |
|---|
| hexose biosynthetic process | GO:0019319 | | 1.476E-06 | 5.657E-04 |
|---|
| monosaccharide biosynthetic process | GO:0046364 | | 2E-06 | 6.572E-04 |
|---|
| polyol metabolic process | GO:0019751 | | 2.411E-06 | 6.931E-04 |
|---|
| alcohol biosynthetic process | GO:0046165 | | 3.392E-06 | 8.67E-04 |
|---|
| neural plate development | GO:0001840 | | 5.947E-06 | 1.368E-03 |
|---|
| establishment of cell polarity | GO:0030010 | | 2.137E-05 | 4.468E-03 |
|---|
