Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 6573-8-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1679 | 2.451e-02 | 1.094e-02 | 1.174e-01 |
|---|
| IPC-NIBC-129 | 0.2075 | 8.943e-02 | 7.748e-02 | 3.958e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2038 | 2.765e-02 | 2.008e-02 | 2.884e-01 |
|---|
| Loi_GPL570 | 0.2269 | 7.222e-02 | 9.296e-02 | 2.989e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1784 | 1.115e-02 | 5.683e-03 | 1.504e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3455 | 1.028e-01 | 5.636e-02 | 5.042e-01 |
|---|
| Schmidt | 0.2351 | 4.139e-02 | 4.349e-02 | 2.440e-01 |
|---|
| Sotiriou | 0.2382 | 9.018e-02 | 3.611e-02 | 5.348e-01 |
|---|
| Wang | 0.2036 | 4.490e-02 | 3.055e-02 | 1.659e-01 |
|---|
| Zhang | 0.2524 | 4.987e-03 | 2.341e-03 | 2.634e-02 |
|---|
Expression data for subnetwork 6573-8-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 6573-8-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| sp1 |   | 31 | 5 | 16 | 8 | 0.054 | 0.186 | 0.147 | 0.242 | 0.125 | 0.202 | 0.284 | 0.227 | 0.194 | 0.091 |
|---|
| pcna | | 39 | 3 | 8 | 3 | 0.096 | 0.202 | 0.109 | 0.180 | 0.118 | 0.256 | 0.151 | 0.059 | 0.162 | 0.123 |
|---|
| hdac2 | | 16 | 10 | 64 | 39 | 0.012 | 0.245 | 0.030 | 0.077 | 0.070 | 0.183 | 0.222 | -0.058 | 0.086 | 0.133 |
|---|
| slc19a1 | | 1 | 90 | 144 | 152 | 0.115 | 0.165 | 0.122 | 0.035 | 0.082 | 0.224 | 0.221 | 0.082 | 0.103 | 0.169 |
|---|
| top2a | | 22 | 7 | 70 | 46 | 0.147 | 0.183 | 0.185 | 0.100 | 0.206 | 0.309 | 0.261 | 0.183 | 0.072 | 0.234 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 6573-8-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 |  | 4.477E-06 | 0.01029669 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 5.098E-06 | 5.863E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 5.098E-06 | 3.909E-03 |
|---|
| folic acid transport | GO:0015884 | | 5.098E-06 | 2.931E-03 |
|---|
| DNA topological change | GO:0006265 | | 7.644E-06 | 3.516E-03 |
|---|
| chromosome segregation | GO:0007059 | | 9.184E-06 | 3.52E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.515E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.783E-05 | 5.127E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.832E-05 | 4.683E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 2.289E-05 | 5.266E-03 |
|---|
| histone deacetylation | GO:0016575 | | 2.797E-05 | 5.848E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.551E-06 | 3.789E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.151E-06 | 2.628E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 2.151E-06 | 1.752E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.226E-06 | 1.97E-03 |
|---|
| folic acid transport | GO:0015884 | | 3.226E-06 | 1.576E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 3.226E-06 | 1.313E-03 |
|---|
| chromosome segregation | GO:0007059 | | 4.271E-06 | 1.491E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 6.007E-06 | 1.834E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.018E-06 | 1.634E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.018E-06 | 1.47E-03 |
|---|
| DNA ligation | GO:0006266 | | 9.667E-06 | 2.147E-03 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.706E-06 | 4.104E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| folic acid transport | GO:0015884 | | 2.313E-06 | 1.391E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 2.313E-06 | 1.113E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 3.469E-06 | 1.391E-03 |
|---|
| chromosome segregation | GO:0007059 | | 4.697E-06 | 1.615E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.946E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.73E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 6.605E-06 | 1.589E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.039E-05 | 2.274E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.551E-06 | 3.789E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.151E-06 | 2.628E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 2.151E-06 | 1.752E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 3.226E-06 | 1.97E-03 |
|---|
| folic acid transport | GO:0015884 | | 3.226E-06 | 1.576E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 3.226E-06 | 1.313E-03 |
|---|
| chromosome segregation | GO:0007059 | | 4.271E-06 | 1.491E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 6.007E-06 | 1.834E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.018E-06 | 1.634E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.018E-06 | 1.47E-03 |
|---|
| DNA ligation | GO:0006266 | | 9.667E-06 | 2.147E-03 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.706E-06 | 4.104E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| folic acid transport | GO:0015884 | | 2.313E-06 | 1.391E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 2.313E-06 | 1.113E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 3.469E-06 | 1.391E-03 |
|---|
| chromosome segregation | GO:0007059 | | 4.697E-06 | 1.615E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.946E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.73E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 6.605E-06 | 1.589E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.039E-05 | 2.274E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.706E-06 | 4.104E-03 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.313E-06 | 2.783E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.313E-06 | 1.855E-03 |
|---|
| folic acid transport | GO:0015884 | | 2.313E-06 | 1.391E-03 |
|---|
| meiotic chromosome segregation | GO:0045132 | | 2.313E-06 | 1.113E-03 |
|---|
| establishment of spindle localization | GO:0051293 | | 3.469E-06 | 1.391E-03 |
|---|
| chromosome segregation | GO:0007059 | | 4.697E-06 | 1.615E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 6.472E-06 | 1.946E-03 |
|---|
| DNA topological change | GO:0006265 | | 6.472E-06 | 1.73E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 6.605E-06 | 1.589E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.039E-05 | 2.274E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 0.01029669 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 5.098E-06 | 5.863E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 5.098E-06 | 3.909E-03 |
|---|
| folic acid transport | GO:0015884 | | 5.098E-06 | 2.931E-03 |
|---|
| DNA topological change | GO:0006265 | | 7.644E-06 | 3.516E-03 |
|---|
| chromosome segregation | GO:0007059 | | 9.184E-06 | 3.52E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.515E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.783E-05 | 5.127E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.832E-05 | 4.683E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 2.289E-05 | 5.266E-03 |
|---|
| histone deacetylation | GO:0016575 | | 2.797E-05 | 5.848E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 0.01029669 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 5.098E-06 | 5.863E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 5.098E-06 | 3.909E-03 |
|---|
| folic acid transport | GO:0015884 | | 5.098E-06 | 2.931E-03 |
|---|
| DNA topological change | GO:0006265 | | 7.644E-06 | 3.516E-03 |
|---|
| chromosome segregation | GO:0007059 | | 9.184E-06 | 3.52E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.515E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.783E-05 | 5.127E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.832E-05 | 4.683E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 2.289E-05 | 5.266E-03 |
|---|
| histone deacetylation | GO:0016575 | | 2.797E-05 | 5.848E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 0.01029669 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 5.098E-06 | 5.863E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 5.098E-06 | 3.909E-03 |
|---|
| folic acid transport | GO:0015884 | | 5.098E-06 | 2.931E-03 |
|---|
| DNA topological change | GO:0006265 | | 7.644E-06 | 3.516E-03 |
|---|
| chromosome segregation | GO:0007059 | | 9.184E-06 | 3.52E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.515E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.783E-05 | 5.127E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.832E-05 | 4.683E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 2.289E-05 | 5.266E-03 |
|---|
| histone deacetylation | GO:0016575 | | 2.797E-05 | 5.848E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of cell cycle | GO:0045787 | | 4.477E-06 | 0.01029669 |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 5.098E-06 | 5.863E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 5.098E-06 | 3.909E-03 |
|---|
| folic acid transport | GO:0015884 | | 5.098E-06 | 2.931E-03 |
|---|
| DNA topological change | GO:0006265 | | 7.644E-06 | 3.516E-03 |
|---|
| chromosome segregation | GO:0007059 | | 9.184E-06 | 3.52E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 1.07E-05 | 3.515E-03 |
|---|
| phosphoinositide-mediated signaling | GO:0048015 | | 1.783E-05 | 5.127E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.832E-05 | 4.683E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 2.289E-05 | 5.266E-03 |
|---|
| histone deacetylation | GO:0016575 | | 2.797E-05 | 5.848E-03 |
|---|
