Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 63967-8-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1403 | 1.425e-02 | 5.239e-03 | 7.706e-02 |
|---|
| IPC-NIBC-129 | 0.2489 | 1.444e-01 | 1.330e-01 | 5.626e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2299 | 1.216e-02 | 7.661e-03 | 1.478e-01 |
|---|
| Loi_GPL570 | 0.1881 | 1.080e-01 | 1.344e-01 | 4.002e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1798 | 3.205e-02 | 2.300e-02 | 4.158e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3088 | 1.253e-01 | 7.267e-02 | 5.672e-01 |
|---|
| Schmidt | 0.2047 | 2.329e-02 | 2.479e-02 | 1.528e-01 |
|---|
| Sotiriou | 0.2748 | 8.809e-02 | 3.492e-02 | 5.274e-01 |
|---|
| Wang | 0.1506 | 1.110e-01 | 9.586e-02 | 3.248e-01 |
|---|
| Zhang | 0.2339 | 9.293e-03 | 4.690e-03 | 4.402e-02 |
|---|
Expression data for subnetwork 63967-8-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 63967-8-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| tsc1 |   | 31 | 5 | 26 | 15 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.196 | 0.006 | 0.010 | 0.043 | -0.007 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| brca1 | | 5 | 20 | 104 | 78 | 0.192 | 0.052 | 0.112 | 0.022 | 0.125 | 0.113 | 0.077 | 0.168 | 0.155 | 0.064 |
|---|
| clspn | | 1 | 90 | 216 | 221 | 0.089 | 0.147 | 0.063 | -0.018 | 0.072 | 0.151 | 0.154 | 0.028 | -0.004 | 0.074 |
|---|
GO Enrichment output for subnetwork 63967-8-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 |  | 1.785E-08 | 4.105E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.374E-06 | 1.58E-03 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 1.374E-06 | 1.053E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.374E-06 | 7.898E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.401E-06 | 6.444E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.472E-06 | 5.642E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.699E-06 | 5.582E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.699E-06 | 4.884E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.036E-06 | 5.204E-04 |
|---|
| positive regulation of protein ubiquitination | GO:0031398 | | 2.06E-06 | 4.738E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 2.06E-06 | 4.307E-04 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 8.962E-09 | 2.19E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.121E-07 | 8.698E-04 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 7.121E-07 | 5.799E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.959E-07 | 4.861E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.32E-07 | 4.065E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.466E-07 | 3.854E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.466E-07 | 3.304E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 1.068E-06 | 3.261E-04 |
|---|
| DNA damage response. signal transduction resulting in transcription | GO:0042772 | | 1.068E-06 | 2.899E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.068E-06 | 2.609E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.16E-06 | 2.577E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.031E-08 | 2.481E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.935E-07 | 9.545E-04 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 7.935E-07 | 6.363E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 7.935E-07 | 4.773E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 9.158E-07 | 4.407E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.573E-07 | 3.839E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.089E-06 | 3.744E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.089E-06 | 3.276E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 1.19E-06 | 3.181E-04 |
|---|
| DNA damage response. signal transduction resulting in transcription | GO:0042772 | | 1.19E-06 | 2.863E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.335E-06 | 2.92E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 8.962E-09 | 2.19E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.121E-07 | 8.698E-04 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 7.121E-07 | 5.799E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 7.959E-07 | 4.861E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 8.32E-07 | 4.065E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 9.466E-07 | 3.854E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 9.466E-07 | 3.304E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 1.068E-06 | 3.261E-04 |
|---|
| DNA damage response. signal transduction resulting in transcription | GO:0042772 | | 1.068E-06 | 2.899E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.068E-06 | 2.609E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.16E-06 | 2.577E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.031E-08 | 2.481E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.935E-07 | 9.545E-04 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 7.935E-07 | 6.363E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 7.935E-07 | 4.773E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 9.158E-07 | 4.407E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.573E-07 | 3.839E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.089E-06 | 3.744E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.089E-06 | 3.276E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 1.19E-06 | 3.181E-04 |
|---|
| DNA damage response. signal transduction resulting in transcription | GO:0042772 | | 1.19E-06 | 2.863E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.335E-06 | 2.92E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.031E-08 | 2.481E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 7.935E-07 | 9.545E-04 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 7.935E-07 | 6.363E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 7.935E-07 | 4.773E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 9.158E-07 | 4.407E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 9.573E-07 | 3.839E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.089E-06 | 3.744E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.089E-06 | 3.276E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 1.19E-06 | 3.181E-04 |
|---|
| DNA damage response. signal transduction resulting in transcription | GO:0042772 | | 1.19E-06 | 2.863E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 1.335E-06 | 2.92E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.785E-08 | 4.105E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.374E-06 | 1.58E-03 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 1.374E-06 | 1.053E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.374E-06 | 7.898E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.401E-06 | 6.444E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.472E-06 | 5.642E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.699E-06 | 5.582E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.699E-06 | 4.884E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.036E-06 | 5.204E-04 |
|---|
| positive regulation of protein ubiquitination | GO:0031398 | | 2.06E-06 | 4.738E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 2.06E-06 | 4.307E-04 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.785E-08 | 4.105E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.374E-06 | 1.58E-03 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 1.374E-06 | 1.053E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.374E-06 | 7.898E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.401E-06 | 6.444E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.472E-06 | 5.642E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.699E-06 | 5.582E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.699E-06 | 4.884E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.036E-06 | 5.204E-04 |
|---|
| positive regulation of protein ubiquitination | GO:0031398 | | 2.06E-06 | 4.738E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 2.06E-06 | 4.307E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.785E-08 | 4.105E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.374E-06 | 1.58E-03 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 1.374E-06 | 1.053E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.374E-06 | 7.898E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.401E-06 | 6.444E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.472E-06 | 5.642E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.699E-06 | 5.582E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.699E-06 | 4.884E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.036E-06 | 5.204E-04 |
|---|
| positive regulation of protein ubiquitination | GO:0031398 | | 2.06E-06 | 4.738E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 2.06E-06 | 4.307E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| regulation of protein ubiquitination | GO:0031396 | | 1.785E-08 | 4.105E-05 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.374E-06 | 1.58E-03 |
|---|
| regulation of centrosome cycle | GO:0046605 | | 1.374E-06 | 1.053E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 1.374E-06 | 7.898E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.401E-06 | 6.444E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.472E-06 | 5.642E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 1.699E-06 | 5.582E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 1.699E-06 | 4.884E-04 |
|---|
| positive regulation of ligase activity | GO:0051351 | | 2.036E-06 | 5.204E-04 |
|---|
| positive regulation of protein ubiquitination | GO:0031398 | | 2.06E-06 | 4.738E-04 |
|---|
| positive regulation of DNA repair | GO:0045739 | | 2.06E-06 | 4.307E-04 |
|---|
