Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 581-7-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1990 | 7.378e-03 | 2.131e-03 | 4.564e-02 |
|---|
| IPC-NIBC-129 | 0.2548 | 8.738e-02 | 7.548e-02 | 3.886e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2613 | 1.079e-02 | 6.656e-03 | 1.331e-01 |
|---|
| Loi_GPL570 | 0.2287 | 6.091e-02 | 7.949e-02 | 2.625e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2036 | 3.222e-03 | 1.061e-03 | 3.141e-02 |
|---|
| Pawitan_GPL96-GPL97 | 0.3354 | 1.624e-01 | 1.014e-01 | 6.528e-01 |
|---|
| Schmidt | 0.2478 | 2.316e-02 | 2.466e-02 | 1.521e-01 |
|---|
| Sotiriou | 0.2751 | 5.996e-02 | 2.015e-02 | 4.121e-01 |
|---|
| Wang | 0.1030 | 2.441e-01 | 2.499e-01 | 5.499e-01 |
|---|
| Zhang | 0.2095 | 5.920e-03 | 2.834e-03 | 3.037e-02 |
|---|
Expression data for subnetwork 581-7-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 581-7-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| cdc2 |   | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| stmn2 | | 19 | 8 | 32 | 18 | 0.057 | 0.106 | 0.005 | 0.052 | 0.110 | 0.006 | 0.034 | 0.103 | 0.075 | 0.113 |
|---|
| sfn | | 4 | 27 | 1 | 5 | 0.077 | 0.137 | 0.111 | 0.172 | 0.112 | 0.219 | 0.100 | 0.147 | 0.025 | 0.079 |
|---|
| top2a | | 22 | 7 | 70 | 46 | 0.147 | 0.183 | 0.185 | 0.100 | 0.206 | 0.309 | 0.261 | 0.183 | 0.072 | 0.234 |
|---|
| krt18 | | 13 | 12 | 99 | 67 | 0.112 | -0.078 | 0.147 | 0.150 | 0.161 | 0.083 | -0.099 | 0.118 | 0.086 | -0.114 |
|---|
| bax | | 3 | 39 | 1 | 10 | 0.029 | 0.185 | 0.233 | 0.192 | 0.088 | 0.172 | 0.175 | 0.019 | -0.094 | 0.041 |
|---|
GO Enrichment output for subnetwork 581-7-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 |  | 2.942E-06 | 6.767E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.942E-06 | 3.384E-03 |
|---|
| DNA topological change | GO:0006265 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 5.779E-06 | 3.323E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 6.334E-06 | 2.428E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 7.873E-06 | 2.587E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 8.231E-06 | 2.366E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.058E-05 | 2.704E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 1.322E-05 | 3.041E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 1.938E-05 | 4.052E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 8.703E-07 | 2.126E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 1.305E-06 | 1.594E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.412E-06 | 1.15E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.593E-06 | 9.728E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.827E-06 | 8.926E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.827E-06 | 7.439E-04 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 1.827E-06 | 6.376E-04 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.927E-06 | 5.884E-04 |
|---|
| DNA topological change | GO:0006265 | | 2.436E-06 | 6.611E-04 |
|---|
| DNA ligation | GO:0006266 | | 3.913E-06 | 9.559E-04 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 3.913E-06 | 8.69E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 1.212E-06 | 2.916E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 1.212E-06 | 1.458E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.132E-06 | 1.71E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 2.316E-06 | 1.393E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.544E-06 | 1.224E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.544E-06 | 1.02E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 2.544E-06 | 8.745E-04 |
|---|
| regulation of peptidase activity | GO:0052547 | | 2.823E-06 | 8.49E-04 |
|---|
| DNA topological change | GO:0006265 | | 3.392E-06 | 9.067E-04 |
|---|
| keratinocyte proliferation | GO:0043616 | | 4.36E-06 | 1.049E-03 |
|---|
| DNA ligation | GO:0006266 | | 5.449E-06 | 1.192E-03 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 8.703E-07 | 2.126E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 1.305E-06 | 1.594E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 1.412E-06 | 1.15E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 1.593E-06 | 9.728E-04 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 1.827E-06 | 8.926E-04 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 1.827E-06 | 7.439E-04 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 1.827E-06 | 6.376E-04 |
|---|
| regulation of peptidase activity | GO:0052547 | | 1.927E-06 | 5.884E-04 |
|---|
| DNA topological change | GO:0006265 | | 2.436E-06 | 6.611E-04 |
|---|
| DNA ligation | GO:0006266 | | 3.913E-06 | 9.559E-04 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 3.913E-06 | 8.69E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 1.212E-06 | 2.916E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 1.212E-06 | 1.458E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.132E-06 | 1.71E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 2.316E-06 | 1.393E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.544E-06 | 1.224E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.544E-06 | 1.02E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 2.544E-06 | 8.745E-04 |
|---|
| regulation of peptidase activity | GO:0052547 | | 2.823E-06 | 8.49E-04 |
|---|
| DNA topological change | GO:0006265 | | 3.392E-06 | 9.067E-04 |
|---|
| keratinocyte proliferation | GO:0043616 | | 4.36E-06 | 1.049E-03 |
|---|
| DNA ligation | GO:0006266 | | 5.449E-06 | 1.192E-03 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 1.212E-06 | 2.916E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 1.212E-06 | 1.458E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 2.132E-06 | 1.71E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 2.316E-06 | 1.393E-03 |
|---|
| tumor necrosis factor-mediated signaling pathway | GO:0033209 | | 2.544E-06 | 1.224E-03 |
|---|
| Golgi to plasma membrane transport | GO:0006893 | | 2.544E-06 | 1.02E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 2.544E-06 | 8.745E-04 |
|---|
| regulation of peptidase activity | GO:0052547 | | 2.823E-06 | 8.49E-04 |
|---|
| DNA topological change | GO:0006265 | | 3.392E-06 | 9.067E-04 |
|---|
| keratinocyte proliferation | GO:0043616 | | 4.36E-06 | 1.049E-03 |
|---|
| DNA ligation | GO:0006266 | | 5.449E-06 | 1.192E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.942E-06 | 6.767E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.942E-06 | 3.384E-03 |
|---|
| DNA topological change | GO:0006265 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 5.779E-06 | 3.323E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 6.334E-06 | 2.428E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 7.873E-06 | 2.587E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 8.231E-06 | 2.366E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.058E-05 | 2.704E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 1.322E-05 | 3.041E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 1.938E-05 | 4.052E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.942E-06 | 6.767E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.942E-06 | 3.384E-03 |
|---|
| DNA topological change | GO:0006265 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 5.779E-06 | 3.323E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 6.334E-06 | 2.428E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 7.873E-06 | 2.587E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 8.231E-06 | 2.366E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.058E-05 | 2.704E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 1.322E-05 | 3.041E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 1.938E-05 | 4.052E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.942E-06 | 6.767E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.942E-06 | 3.384E-03 |
|---|
| DNA topological change | GO:0006265 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 5.779E-06 | 3.323E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 6.334E-06 | 2.428E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 7.873E-06 | 2.587E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 8.231E-06 | 2.366E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.058E-05 | 2.704E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 1.322E-05 | 3.041E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 1.938E-05 | 4.052E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| positive regulation of viral genome replication | GO:0045070 | | 2.942E-06 | 6.767E-03 |
|---|
| regulation of retroviral genome replication | GO:0045091 | | 2.942E-06 | 3.384E-03 |
|---|
| DNA topological change | GO:0006265 | | 4.412E-06 | 3.383E-03 |
|---|
| regulation of caspase activity | GO:0043281 | | 5.779E-06 | 3.323E-03 |
|---|
| regulation of protein homodimerization activity | GO:0043496 | | 6.175E-06 | 2.841E-03 |
|---|
| regulation of endopeptidase activity | GO:0052548 | | 6.334E-06 | 2.428E-03 |
|---|
| regulation of peptidase activity | GO:0052547 | | 7.873E-06 | 2.587E-03 |
|---|
| keratinocyte proliferation | GO:0043616 | | 8.231E-06 | 2.366E-03 |
|---|
| DNA ligation | GO:0006266 | | 1.058E-05 | 2.704E-03 |
|---|
| positive regulation of viral reproduction | GO:0048524 | | 1.322E-05 | 3.041E-03 |
|---|
| positive regulation of cell growth | GO:0030307 | | 1.938E-05 | 4.052E-03 |
|---|
