Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 5591-7-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1727 | 2.489e-02 | 1.117e-02 | 1.188e-01 |
|---|
| IPC-NIBC-129 | 0.2123 | 9.831e-02 | 8.625e-02 | 4.265e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2031 | 2.515e-02 | 1.797e-02 | 2.683e-01 |
|---|
| Loi_GPL570 | 0.2193 | 6.152e-02 | 8.022e-02 | 2.645e-01 |
|---|
| Loi_GPL96-GPL97 | 0.1685 | 9.227e-03 | 4.411e-03 | 1.212e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3158 | 9.051e-02 | 4.790e-02 | 4.656e-01 |
|---|
| Schmidt | 0.2471 | 2.827e-02 | 2.996e-02 | 1.796e-01 |
|---|
| Sotiriou | 0.2625 | 1.057e-01 | 4.527e-02 | 5.859e-01 |
|---|
| Wang | 0.2302 | 2.834e-02 | 1.689e-02 | 1.158e-01 |
|---|
| Zhang | 0.2641 | 8.256e-03 | 4.110e-03 | 3.995e-02 |
|---|
Expression data for subnetwork 5591-7-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 5591-7-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| sp1 |   | 31 | 5 | 16 | 8 | 0.054 | 0.186 | 0.147 | 0.242 | 0.125 | 0.202 | 0.284 | 0.227 | 0.194 | 0.091 |
|---|
| pcna | | 39 | 3 | 8 | 3 | 0.096 | 0.202 | 0.109 | 0.180 | 0.118 | 0.256 | 0.151 | 0.059 | 0.162 | 0.123 |
|---|
| hdac2 | | 16 | 10 | 64 | 39 | 0.012 | 0.245 | 0.030 | 0.077 | 0.070 | 0.183 | 0.222 | -0.058 | 0.086 | 0.133 |
|---|
| prkdc | | 1 | 90 | 118 | 123 | 0.021 | 0.121 | 0.046 | -0.069 | 0.088 | 0.096 | 0.188 | 0.127 | 0.085 | -0.017 |
|---|
| top2a | | 22 | 7 | 70 | 46 | 0.147 | 0.183 | 0.185 | 0.100 | 0.206 | 0.309 | 0.261 | 0.183 | 0.072 | 0.234 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| hoxc4 | | 1 | 90 | 118 | 123 | 0.029 | 0.008 | 0.018 | -0.017 | 0.052 | -0.149 | 0.044 | 0.031 | 0.163 | 0.228 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 5591-7-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anterior/posterior pattern formation | GO:0009952 |  | 5.512E-13 | 1.268E-09 |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 1.798E-09 | 2.068E-06 |
|---|
| protein destabilization | GO:0031648 | | 6.283E-09 | 4.817E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 6.283E-09 | 3.613E-06 |
|---|
| embryonic organ development | GO:0048568 | | 2.134E-08 | 9.817E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 2.197E-08 | 8.42E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 2.197E-08 | 7.217E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 5.266E-08 | 1.514E-05 |
|---|
| cartilage development | GO:0051216 | | 9.67E-08 | 2.471E-05 |
|---|
| germ cell migration | GO:0008354 | | 1.033E-07 | 2.376E-05 |
|---|
| non-recombinational repair | GO:0000726 | | 1.377E-07 | 2.879E-05 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 2.809E-10 | 6.862E-07 |
|---|
| immunoglobulin V(D)J recombination | GO:0033152 | | 1.522E-09 | 1.859E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.522E-09 | 1.24E-06 |
|---|
| protein destabilization | GO:0031648 | | 3.043E-09 | 1.859E-06 |
|---|
| embryonic organ development | GO:0048568 | | 4.243E-09 | 2.073E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 5.324E-09 | 2.168E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 5.324E-09 | 1.858E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 1.823E-08 | 5.568E-06 |
|---|
| cartilage development | GO:0051216 | | 2.096E-08 | 5.69E-06 |
|---|
| embryonic skeletal system development | GO:0048706 | | 2.263E-08 | 5.529E-06 |
|---|
| germ cell migration | GO:0008354 | | 2.506E-08 | 5.566E-06 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 4.357E-10 | 1.048E-06 |
|---|
| immunoglobulin V(D)J recombination | GO:0033152 | | 2.127E-09 | 2.559E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.127E-09 | 1.706E-06 |
|---|
| protein destabilization | GO:0031648 | | 4.252E-09 | 2.558E-06 |
|---|
| embryonic organ development | GO:0048568 | | 6.577E-09 | 3.165E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 7.438E-09 | 2.983E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 7.438E-09 | 2.557E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 2.547E-08 | 7.661E-06 |
|---|
| embryonic skeletal system development | GO:0048706 | | 2.774E-08 | 7.415E-06 |
|---|
| cartilage development | GO:0051216 | | 3.004E-08 | 7.227E-06 |
|---|
| germ cell migration | GO:0008354 | | 3.501E-08 | 7.657E-06 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 2.809E-10 | 6.862E-07 |
|---|
| immunoglobulin V(D)J recombination | GO:0033152 | | 1.522E-09 | 1.859E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 1.522E-09 | 1.24E-06 |
|---|
| protein destabilization | GO:0031648 | | 3.043E-09 | 1.859E-06 |
|---|
| embryonic organ development | GO:0048568 | | 4.243E-09 | 2.073E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 5.324E-09 | 2.168E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 5.324E-09 | 1.858E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 1.823E-08 | 5.568E-06 |
|---|
| cartilage development | GO:0051216 | | 2.096E-08 | 5.69E-06 |
|---|
| embryonic skeletal system development | GO:0048706 | | 2.263E-08 | 5.529E-06 |
|---|
| germ cell migration | GO:0008354 | | 2.506E-08 | 5.566E-06 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 4.357E-10 | 1.048E-06 |
|---|
| immunoglobulin V(D)J recombination | GO:0033152 | | 2.127E-09 | 2.559E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.127E-09 | 1.706E-06 |
|---|
| protein destabilization | GO:0031648 | | 4.252E-09 | 2.558E-06 |
|---|
| embryonic organ development | GO:0048568 | | 6.577E-09 | 3.165E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 7.438E-09 | 2.983E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 7.438E-09 | 2.557E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 2.547E-08 | 7.661E-06 |
|---|
| embryonic skeletal system development | GO:0048706 | | 2.774E-08 | 7.415E-06 |
|---|
| cartilage development | GO:0051216 | | 3.004E-08 | 7.227E-06 |
|---|
| germ cell migration | GO:0008354 | | 3.501E-08 | 7.657E-06 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 4.357E-10 | 1.048E-06 |
|---|
| immunoglobulin V(D)J recombination | GO:0033152 | | 2.127E-09 | 2.559E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 2.127E-09 | 1.706E-06 |
|---|
| protein destabilization | GO:0031648 | | 4.252E-09 | 2.558E-06 |
|---|
| embryonic organ development | GO:0048568 | | 6.577E-09 | 3.165E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 7.438E-09 | 2.983E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 7.438E-09 | 2.557E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 2.547E-08 | 7.661E-06 |
|---|
| embryonic skeletal system development | GO:0048706 | | 2.774E-08 | 7.415E-06 |
|---|
| cartilage development | GO:0051216 | | 3.004E-08 | 7.227E-06 |
|---|
| germ cell migration | GO:0008354 | | 3.501E-08 | 7.657E-06 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anterior/posterior pattern formation | GO:0009952 | | 5.512E-13 | 1.268E-09 |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 1.798E-09 | 2.068E-06 |
|---|
| protein destabilization | GO:0031648 | | 6.283E-09 | 4.817E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 6.283E-09 | 3.613E-06 |
|---|
| embryonic organ development | GO:0048568 | | 2.134E-08 | 9.817E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 2.197E-08 | 8.42E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 2.197E-08 | 7.217E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 5.266E-08 | 1.514E-05 |
|---|
| cartilage development | GO:0051216 | | 9.67E-08 | 2.471E-05 |
|---|
| germ cell migration | GO:0008354 | | 1.033E-07 | 2.376E-05 |
|---|
| non-recombinational repair | GO:0000726 | | 1.377E-07 | 2.879E-05 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anterior/posterior pattern formation | GO:0009952 | | 5.512E-13 | 1.268E-09 |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 1.798E-09 | 2.068E-06 |
|---|
| protein destabilization | GO:0031648 | | 6.283E-09 | 4.817E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 6.283E-09 | 3.613E-06 |
|---|
| embryonic organ development | GO:0048568 | | 2.134E-08 | 9.817E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 2.197E-08 | 8.42E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 2.197E-08 | 7.217E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 5.266E-08 | 1.514E-05 |
|---|
| cartilage development | GO:0051216 | | 9.67E-08 | 2.471E-05 |
|---|
| germ cell migration | GO:0008354 | | 1.033E-07 | 2.376E-05 |
|---|
| non-recombinational repair | GO:0000726 | | 1.377E-07 | 2.879E-05 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anterior/posterior pattern formation | GO:0009952 | | 5.512E-13 | 1.268E-09 |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 1.798E-09 | 2.068E-06 |
|---|
| protein destabilization | GO:0031648 | | 6.283E-09 | 4.817E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 6.283E-09 | 3.613E-06 |
|---|
| embryonic organ development | GO:0048568 | | 2.134E-08 | 9.817E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 2.197E-08 | 8.42E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 2.197E-08 | 7.217E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 5.266E-08 | 1.514E-05 |
|---|
| cartilage development | GO:0051216 | | 9.67E-08 | 2.471E-05 |
|---|
| germ cell migration | GO:0008354 | | 1.033E-07 | 2.376E-05 |
|---|
| non-recombinational repair | GO:0000726 | | 1.377E-07 | 2.879E-05 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| anterior/posterior pattern formation | GO:0009952 | | 5.512E-13 | 1.268E-09 |
|---|
| embryonic organ morphogenesis | GO:0048562 | | 1.798E-09 | 2.068E-06 |
|---|
| protein destabilization | GO:0031648 | | 6.283E-09 | 4.817E-06 |
|---|
| hemopoietic progenitor cell differentiation | GO:0002244 | | 6.283E-09 | 3.613E-06 |
|---|
| embryonic organ development | GO:0048568 | | 2.134E-08 | 9.817E-06 |
|---|
| B cell lineage commitment | GO:0002326 | | 2.197E-08 | 8.42E-06 |
|---|
| T cell lineage commitment | GO:0002360 | | 2.197E-08 | 7.217E-06 |
|---|
| V(D)J recombination | GO:0033151 | | 5.266E-08 | 1.514E-05 |
|---|
| cartilage development | GO:0051216 | | 9.67E-08 | 2.471E-05 |
|---|
| germ cell migration | GO:0008354 | | 1.033E-07 | 2.376E-05 |
|---|
| non-recombinational repair | GO:0000726 | | 1.377E-07 | 2.879E-05 |
|---|
