Study run-b1
Study informations
127 subnetworks in total page | file
236 genes associated page | file
Enriched GO terms page
General informations
General Index page
Study Index page
Subnetwork 55143-6-real
score
| Dataset | Score | P-val 1 | P-val 2 | P-val 3 |
|---|
| Desmedt | 0.1406 | 1.578e-02 | 6.020e-03 | 8.348e-02 |
|---|
| IPC-NIBC-129 | 0.2008 | 8.365e-02 | 7.185e-02 | 3.751e-01 |
|---|
| Ivshina_GPL96-GPL97 | 0.2250 | 3.159e-02 | 2.345e-02 | 3.183e-01 |
|---|
| Loi_GPL570 | 0.2322 | 9.641e-02 | 1.212e-01 | 3.695e-01 |
|---|
| Loi_GPL96-GPL97 | 0.2170 | 3.166e-02 | 2.263e-02 | 4.118e-01 |
|---|
| Pawitan_GPL96-GPL97 | 0.3060 | 1.039e-01 | 5.717e-02 | 5.077e-01 |
|---|
| Schmidt | 0.2133 | 1.621e-02 | 1.740e-02 | 1.119e-01 |
|---|
| Sotiriou | 0.2976 | 4.816e-02 | 1.473e-02 | 3.534e-01 |
|---|
| Wang | 0.1579 | 9.810e-02 | 8.218e-02 | 2.974e-01 |
|---|
| Zhang | 0.2513 | 9.737e-03 | 4.942e-03 | 4.573e-02 |
|---|
Expression data for subnetwork 55143-6-real in each dataset
Desmedt |
IPC-NIBC-129 |
Ivshina_GPL96-GPL97 |
Loi_GPL570 |
Loi_GPL96-GPL97 |
Pawitan_GPL96-GPL97 |
Schmidt |
Sotiriou |
Wang |
Zhang |
Subnetwork structure for each dataset
- Desmedt
Score for each gene in subnetwork 55143-6-real in each dataset
| Gene Symbol | Links | Frequency | Frequency Rank | Subnetwork score rank | Global rank |
Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |
|---|
| tsc1 |   | 31 | 5 | 26 | 15 | 0.049 | 0.012 | -0.055 | 0.072 | 0.055 | -0.196 | 0.006 | 0.010 | 0.043 | -0.007 |
|---|
| cdc2 | | 99 | 1 | 1 | 1 | 0.073 | 0.247 | 0.206 | 0.172 | 0.247 | 0.282 | 0.226 | 0.221 | 0.067 | 0.297 |
|---|
| cdca8 | | 1 | 90 | 159 | 169 | 0.032 | 0.180 | 0.107 | 0.200 | 0.124 | 0.158 | 0.248 | 0.123 | 0.058 | 0.049 |
|---|
| ccnb1 | | 33 | 4 | 68 | 40 | 0.082 | 0.246 | 0.212 | 0.224 | 0.256 | 0.351 | 0.129 | 0.249 | 0.152 | 0.167 |
|---|
| birc5 | | 3 | 39 | 99 | 83 | 0.101 | 0.216 | 0.190 | 0.134 | 0.223 | 0.202 | 0.236 | 0.241 | 0.124 | 0.205 |
|---|
| ccnd1 | | 97 | 2 | 8 | 2 | 0.127 | -0.183 | 0.062 | 0.190 | 0.157 | 0.105 | -0.107 | 0.174 | 0.106 | 0.144 |
|---|
GO Enrichment output for subnetwork 55143-6-real in each dataset
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 |  | 1.754E-07 | 4.035E-04 |
|---|
| interphase | GO:0051325 | | 1.925E-07 | 2.214E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.45E-07 | 1.878E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 1.49E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.596E-06 | 1.654E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.596E-06 | 1.378E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 1.772E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.55E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 1.671E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 1.58E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.578E-03 |
|---|
IPC-NIBC-129 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.811E-08 | 9.31E-05 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 8.749E-08 | 1.069E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.547E-07 | 5.332E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.234E-06 | 7.537E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.851E-06 | 9.043E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.889E-06 | 7.692E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.975E-06 | 6.891E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.246E-06 | 6.86E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.246E-06 | 6.097E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.59E-06 | 6.328E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 2.59E-06 | 5.753E-04 |
|---|
Ivshina_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.498E-08 | 1.564E-04 |
|---|
| interphase | GO:0051325 | | 7.368E-08 | 8.864E-05 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.437E-07 | 1.153E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 6.463E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.719E-06 | 8.27E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.719E-06 | 6.892E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 3.098E-06 | 1.065E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 3.238E-06 | 9.738E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 3.607E-06 | 9.644E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 3.607E-06 | 8.68E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 3.683E-06 | 8.056E-04 |
|---|
Loi_GPL570 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 3.811E-08 | 9.31E-05 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 8.749E-08 | 1.069E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 6.547E-07 | 5.332E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.234E-06 | 7.537E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.851E-06 | 9.043E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 1.889E-06 | 7.692E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 1.975E-06 | 6.891E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 2.246E-06 | 6.86E-04 |
|---|
| regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051439 | | 2.246E-06 | 6.097E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 2.59E-06 | 6.328E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 2.59E-06 | 5.753E-04 |
|---|
Loi_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.498E-08 | 1.564E-04 |
|---|
| interphase | GO:0051325 | | 7.368E-08 | 8.864E-05 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.437E-07 | 1.153E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 6.463E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.719E-06 | 8.27E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.719E-06 | 6.892E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 3.098E-06 | 1.065E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 3.238E-06 | 9.738E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 3.607E-06 | 9.644E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 3.607E-06 | 8.68E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 3.683E-06 | 8.056E-04 |
|---|
Pawitan_GPL96-GPL97 file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 6.498E-08 | 1.564E-04 |
|---|
| interphase | GO:0051325 | | 7.368E-08 | 8.864E-05 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 1.437E-07 | 1.153E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 1.074E-06 | 6.463E-04 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 1.719E-06 | 8.27E-04 |
|---|
| activation of Ras GTPase activity | GO:0032856 | | 1.719E-06 | 6.892E-04 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 3.098E-06 | 1.065E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 3.238E-06 | 9.738E-04 |
|---|
| positive regulation of mitotic cell cycle | GO:0045931 | | 3.607E-06 | 9.644E-04 |
|---|
| spindle checkpoint | GO:0031577 | | 3.607E-06 | 8.68E-04 |
|---|
| positive regulation of ubiquitin-protein ligase activity | GO:0051443 | | 3.683E-06 | 8.056E-04 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.754E-07 | 4.035E-04 |
|---|
| interphase | GO:0051325 | | 1.925E-07 | 2.214E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.45E-07 | 1.878E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 1.49E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.596E-06 | 1.654E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.596E-06 | 1.378E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 1.772E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.55E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 1.671E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 1.58E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.578E-03 |
|---|
Sotiriou file
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.754E-07 | 4.035E-04 |
|---|
| interphase | GO:0051325 | | 1.925E-07 | 2.214E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.45E-07 | 1.878E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 1.49E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.596E-06 | 1.654E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.596E-06 | 1.378E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 1.772E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.55E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 1.671E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 1.58E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.578E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.754E-07 | 4.035E-04 |
|---|
| interphase | GO:0051325 | | 1.925E-07 | 2.214E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.45E-07 | 1.878E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 1.49E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.596E-06 | 1.654E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.596E-06 | 1.378E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 1.772E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.55E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 1.671E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 1.58E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.578E-03 |
|---|
| Name | Accession Number | Link | P-val | Corrected P-val |
|---|
| interphase of mitotic cell cycle | GO:0051329 | | 1.754E-07 | 4.035E-04 |
|---|
| interphase | GO:0051325 | | 1.925E-07 | 2.214E-04 |
|---|
| G2/M transition of mitotic cell cycle | GO:0000086 | | 2.45E-07 | 1.878E-04 |
|---|
| positive regulation of cell cycle | GO:0045787 | | 2.592E-06 | 1.49E-03 |
|---|
| negative regulation of protein ubiquitination | GO:0031397 | | 3.596E-06 | 1.654E-03 |
|---|
| positive regulation of Rho GTPase activity | GO:0032321 | | 3.596E-06 | 1.378E-03 |
|---|
| spindle checkpoint | GO:0031577 | | 5.392E-06 | 1.772E-03 |
|---|
| establishment of chromosome localization | GO:0051303 | | 5.392E-06 | 1.55E-03 |
|---|
| anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | GO:0031145 | | 6.538E-06 | 1.671E-03 |
|---|
| positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | GO:0051437 | | 6.868E-06 | 1.58E-03 |
|---|
| positive regulation of cyclin-dependent protein kinase activity | GO:0045737 | | 7.546E-06 | 1.578E-03 |
|---|
