Study run-b1

Study informations

127 subnetworks in total page | file

236 genes associated page | file

Enriched GO terms page

General informations

General Index page

Study Index page

Subnetwork 51068-5-real

score

Dataset	Score	P-val 1	P-val 2	P-val 3
Desmedt	0.1571	1.588e-02	6.075e-03	8.393e-02
IPC-NIBC-129	0.2220	8.824e-02	7.632e-02	3.916e-01
Ivshina_GPL96-GPL97	0.2247	2.076e-02	1.436e-02	2.310e-01
Loi_GPL570	0.2279	1.485e-01	1.801e-01	4.957e-01
Loi_GPL96-GPL97	0.1810	1.694e-02	9.929e-03	2.342e-01
Pawitan_GPL96-GPL97	0.3261	1.701e-01	1.076e-01	6.683e-01
Schmidt	0.1801	3.046e-02	3.223e-02	1.910e-01
Sotiriou	0.2578	8.639e-02	3.396e-02	5.212e-01
Wang	0.2051	4.373e-02	2.953e-02	1.625e-01
Zhang	0.2051	6.936e-03	3.383e-03	3.461e-02

Expression data for subnetwork 51068-5-real in each dataset

Desmedt | IPC-NIBC-129 | Ivshina_GPL96-GPL97 | Loi_GPL570 | Loi_GPL96-GPL97 | Pawitan_GPL96-GPL97 | Schmidt | Sotiriou | Wang | Zhang |

Subnetwork structure for each dataset

Desmedt IPC-NIBC-129 Ivshina_GPL96-GPL97 Loi_GPL570 Loi_GPL96-GPL97 Pawitan_GPL96-GPL97 Schmidt Sotiriou Wang Zhang

Desmedt

Score for each gene in subnetwork 51068-5-real in each dataset

Gene Symbol	Links	Frequency	Frequency Rank	Subnetwork score rank	Global rank	Desmedt	IPC-NIBC-129	Ivshina_GPL96-GPL97	Loi_GPL570	Loi_GPL96-GPL97	Pawitan_GPL96-GPL97	Schmidt	Sotiriou	Wang	Zhang
cdkn3		18	9	26	16	0.114	0.269	0.199	0.136	0.193	0.323	0.186	0.198	0.134	0.271
nmd3		1	90	206	206	0.148	0.168	0.080	0.180	0.058	0.016	0.007	0.036	0.105	-0.069
ccnd1		97	2	8	2	0.127	-0.183	0.062	0.190	0.157	0.105	-0.107	0.174	0.106	0.144
ran		4	27	182	155	0.032	0.181	0.147	0.083	0.166	0.247	0.127	0.178	0.052	-0.025
cdc2		99	1	1	1	0.073	0.247	0.206	0.172	0.247	0.282	0.226	0.221	0.067	0.297
ranbp9		4	27	182	155	0.172	0.207	0.012	0.253	0.126	0.148	0.143	0.127	0.205	0.021
xpo1		3	39	161	141	0.020	0.153	0.081	0.020	0.092	0.101	0.194	0.104	0.140	0.090
rcc1		3	39	182	166	-0.056	0.114	0.136	0.093	0.114	0.167	0.113	0.063	-0.108	0.072

GO Enrichment output for subnetwork 51068-5-real in each dataset

Desmedt file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.651E-08	1.3E-04
mitotic spindle organization	GO:0007052		1.033E-07	1.188E-04
protein export from nucleus	GO:0006611		3.497E-07	2.681E-04
microtubule cytoskeleton organization	GO:0000226		8.638E-07	4.967E-04
interphase of mitotic cell cycle	GO:0051329		9.496E-07	4.368E-04
interphase	GO:0051325		1.042E-06	3.993E-04
spindle organization	GO:0007051		2.515E-06	8.265E-04
nuclear export	GO:0051168		1.061E-05	3.05E-03
microtubule nucleation	GO:0007020		1.175E-05	3.004E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.275E-05	2.933E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.645E-05	3.439E-03

IPC-NIBC-129 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		3.043E-08	7.435E-05
mitotic spindle organization	GO:0007052		6.733E-08	8.225E-05
protein export from nucleus	GO:0006611		2.956E-07	2.407E-04
interphase of mitotic cell cycle	GO:0051329		6.573E-07	4.015E-04
spindle organization	GO:0007051		1.504E-06	7.349E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		8.77E-06	3.571E-03
nuclear export	GO:0051168		9.735E-06	3.397E-03
microtubule nucleation	GO:0007020		9.952E-06	3.039E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.326E-05	3.6E-03
regulation of S phase of mitotic cell cycle	GO:0007090		2.13E-05	5.203E-03
regulation of S phase	GO:0033261		4.3E-05	9.549E-03

Ivshina_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		4.128E-08	9.931E-05
mitotic spindle organization	GO:0007052		8.52E-08	1.025E-04
protein export from nucleus	GO:0006611		3.74E-07	2.999E-04
interphase of mitotic cell cycle	GO:0051329		7.856E-07	4.725E-04
interphase	GO:0051325		8.9E-07	4.283E-04
spindle organization	GO:0007051		1.902E-06	7.627E-04
nuclear export	GO:0051168		9.945E-06	3.418E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.108E-05	3.333E-03
microtubule nucleation	GO:0007020		1.169E-05	3.125E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.558E-05	3.748E-03
regulation of S phase of mitotic cell cycle	GO:0007090		2.501E-05	5.471E-03

Loi_GPL570 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		3.043E-08	7.435E-05
mitotic spindle organization	GO:0007052		6.733E-08	8.225E-05
protein export from nucleus	GO:0006611		2.956E-07	2.407E-04
interphase of mitotic cell cycle	GO:0051329		6.573E-07	4.015E-04
spindle organization	GO:0007051		1.504E-06	7.349E-04
regulation of cyclin-dependent protein kinase activity	GO:0000079		8.77E-06	3.571E-03
nuclear export	GO:0051168		9.735E-06	3.397E-03
microtubule nucleation	GO:0007020		9.952E-06	3.039E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.326E-05	3.6E-03
regulation of S phase of mitotic cell cycle	GO:0007090		2.13E-05	5.203E-03
regulation of S phase	GO:0033261		4.3E-05	9.549E-03

Loi_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		4.128E-08	9.931E-05
mitotic spindle organization	GO:0007052		8.52E-08	1.025E-04
protein export from nucleus	GO:0006611		3.74E-07	2.999E-04
interphase of mitotic cell cycle	GO:0051329		7.856E-07	4.725E-04
interphase	GO:0051325		8.9E-07	4.283E-04
spindle organization	GO:0007051		1.902E-06	7.627E-04
nuclear export	GO:0051168		9.945E-06	3.418E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.108E-05	3.333E-03
microtubule nucleation	GO:0007020		1.169E-05	3.125E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.558E-05	3.748E-03
regulation of S phase of mitotic cell cycle	GO:0007090		2.501E-05	5.471E-03

Pawitan_GPL96-GPL97 file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		4.128E-08	9.931E-05
mitotic spindle organization	GO:0007052		8.52E-08	1.025E-04
protein export from nucleus	GO:0006611		3.74E-07	2.999E-04
interphase of mitotic cell cycle	GO:0051329		7.856E-07	4.725E-04
interphase	GO:0051325		8.9E-07	4.283E-04
spindle organization	GO:0007051		1.902E-06	7.627E-04
nuclear export	GO:0051168		9.945E-06	3.418E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.108E-05	3.333E-03
microtubule nucleation	GO:0007020		1.169E-05	3.125E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.558E-05	3.748E-03
regulation of S phase of mitotic cell cycle	GO:0007090		2.501E-05	5.471E-03

Schmidt file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.651E-08	1.3E-04
mitotic spindle organization	GO:0007052		1.033E-07	1.188E-04
protein export from nucleus	GO:0006611		3.497E-07	2.681E-04
microtubule cytoskeleton organization	GO:0000226		8.638E-07	4.967E-04
interphase of mitotic cell cycle	GO:0051329		9.496E-07	4.368E-04
interphase	GO:0051325		1.042E-06	3.993E-04
spindle organization	GO:0007051		2.515E-06	8.265E-04
nuclear export	GO:0051168		1.061E-05	3.05E-03
microtubule nucleation	GO:0007020		1.175E-05	3.004E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.275E-05	2.933E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.645E-05	3.439E-03

Sotiriou file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.651E-08	1.3E-04
mitotic spindle organization	GO:0007052		1.033E-07	1.188E-04
protein export from nucleus	GO:0006611		3.497E-07	2.681E-04
microtubule cytoskeleton organization	GO:0000226		8.638E-07	4.967E-04
interphase of mitotic cell cycle	GO:0051329		9.496E-07	4.368E-04
interphase	GO:0051325		1.042E-06	3.993E-04
spindle organization	GO:0007051		2.515E-06	8.265E-04
nuclear export	GO:0051168		1.061E-05	3.05E-03
microtubule nucleation	GO:0007020		1.175E-05	3.004E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.275E-05	2.933E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.645E-05	3.439E-03

Wang file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.651E-08	1.3E-04
mitotic spindle organization	GO:0007052		1.033E-07	1.188E-04
protein export from nucleus	GO:0006611		3.497E-07	2.681E-04
microtubule cytoskeleton organization	GO:0000226		8.638E-07	4.967E-04
interphase of mitotic cell cycle	GO:0051329		9.496E-07	4.368E-04
interphase	GO:0051325		1.042E-06	3.993E-04
spindle organization	GO:0007051		2.515E-06	8.265E-04
nuclear export	GO:0051168		1.061E-05	3.05E-03
microtubule nucleation	GO:0007020		1.175E-05	3.004E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.275E-05	2.933E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.645E-05	3.439E-03

Zhang file

Name	Accession Number	Link	P-val	Corrected P-val
G1/S transition of mitotic cell cycle	GO:0000082		5.651E-08	1.3E-04
mitotic spindle organization	GO:0007052		1.033E-07	1.188E-04
protein export from nucleus	GO:0006611		3.497E-07	2.681E-04
microtubule cytoskeleton organization	GO:0000226		8.638E-07	4.967E-04
interphase of mitotic cell cycle	GO:0051329		9.496E-07	4.368E-04
interphase	GO:0051325		1.042E-06	3.993E-04
spindle organization	GO:0007051		2.515E-06	8.265E-04
nuclear export	GO:0051168		1.061E-05	3.05E-03
microtubule nucleation	GO:0007020		1.175E-05	3.004E-03
regulation of cyclin-dependent protein kinase activity	GO:0000079		1.275E-05	2.933E-03
positive regulation of cyclin-dependent protein kinase activity	GO:0045737		1.645E-05	3.439E-03